BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_E09 (843 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_8872| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5 SB_15003| Best HMM Match : WAP (HMM E-Value=0.0036) 30 2.0 SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2) 29 3.6 SB_48628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_52469| Best HMM Match : MSSP (HMM E-Value=0.54) 29 4.7 SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 6.2 SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2 SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2 >SB_8872| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 143 Score = 30.7 bits (66), Expect = 1.5 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +2 Query: 293 NIVLDSKADILGNWIGDVTTQDNMNFKIESTQTKINPGPATAVRFFVQYNTLN 451 NI++ + I+GN I TT++N N I T + P P+ + Y+ +N Sbjct: 58 NIIIVTNITIIGNVIVSNTTKNNTNTIIIITSSSAPPSPSYYHHLYRHYHHIN 110 >SB_15003| Best HMM Match : WAP (HMM E-Value=0.0036) Length = 230 Score = 30.3 bits (65), Expect = 2.0 Identities = 25/63 (39%), Positives = 32/63 (50%) Frame = +2 Query: 8 FSKRRAQKTRVRGINRVGKQFFL*HTSCLRMVQIKMLGFVTVVLVLALSVRTQDQSTPIS 187 FS RR QKT R ++R G S L M + V +VL LAL Q Q+TP++ Sbjct: 62 FSARREQKTVRRRLDRQGAL-----DSALAMASLPRS--VMLVLFLALWTLAQGQTTPVT 114 Query: 188 PCP 196 CP Sbjct: 115 -CP 116 >SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2) Length = 393 Score = 29.5 bits (63), Expect = 3.6 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -1 Query: 216 VSYSKTFGHGEIGVLWSCVRTDSAKTSTTVTKPSILICTIRKQLV 82 +S S TF GE+ ++W C + KPS C +R+ + Sbjct: 345 LSGSSTFPEGELLLVWKCSEMKEGNEVVGIFKPSENSCYLRRSQI 389 >SB_48628| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 427 Score = 29.5 bits (63), Expect = 3.6 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +1 Query: 628 IP*TNK*TP*ILTRG-RQKLKDRKFLLEDLR--IXFVRPQIPDTRTXSPDVR 774 +P + P +L G RQ L D + +L D+R + VR +PD R PDVR Sbjct: 319 VPDVCREVPDVLVPGVRQVLPDVRRVLSDVRRVLPDVRQVLPDVRRVLPDVR 370 >SB_52469| Best HMM Match : MSSP (HMM E-Value=0.54) Length = 341 Score = 29.1 bits (62), Expect = 4.7 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 248 RHTTSQPLTPAFHTRKHSGMVRLECFGPVCELIVLKP 138 +H + PLT KH GM L GPVC+ + + P Sbjct: 12 KHVSMGPLTTGGPVCKHVGMGPLTTGGPVCKHVSMWP 48 Score = 28.3 bits (60), Expect = 8.2 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 Query: 248 RHTTSQPLTPAFHTRKHSGMVRLECFGPVCELIVLKP 138 +H PLT KH GM L GPVC+ I + P Sbjct: 275 KHVGMWPLTTGGPVCKHVGMGPLTTGGPVCKHIGMGP 311 Score = 28.3 bits (60), Expect = 8.2 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -2 Query: 248 RHTTSQPLTPAFHTRKHSGMVRLECFGPVCELIVLKP 138 +H PLT KH GM L GPVC+ I + P Sbjct: 290 KHVGMGPLTTGGPVCKHIGMGPLTTGGPVCKHIGMGP 326 >SB_50693| Best HMM Match : C2 (HMM E-Value=0) Length = 1049 Score = 28.7 bits (61), Expect = 6.2 Identities = 12/48 (25%), Positives = 25/48 (52%) Frame = +3 Query: 543 RAIQSRTDSSQLRLVDPKHNPIEDNKLLHPLDQQVDPLNTDSRTPETE 686 R + + + Q+ L P H+ +ED+ P Q + P +T ++P+ + Sbjct: 809 RISKKSSPNPQITLQQPTHDSLEDDGTQSPKTQSLKPQSTKPQSPKPQ 856 >SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1743 Score = 28.7 bits (61), Expect = 6.2 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 6/57 (10%) Frame = -1 Query: 312 LLSRTILSHREYNVLSVETWTTPY-HLPASDPGVSYSKT-FGHG----EIGVLWSCV 160 ++++T++ H EYN ++ +W T + LP + +S++ T F G E+ LW V Sbjct: 480 IITKTLVDHLEYNYVAKWSWKTYFLDLPITSLAMSFTATPFSCGTLCDELSRLWLLV 536 >SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 435 Score = 28.7 bits (61), Expect = 6.2 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Frame = -1 Query: 384 VLSILKFM-LSCVVTS-PIQFPSISALLSRTILSHREYNVLSVETWTTPYHLPASDPGVS 211 VLS FM SC+ +S PI + L + + SH + LSV PGV Sbjct: 172 VLSSSPFMQASCLRSSNPICLTHMHTLTTPSCTSHSKLTALSVR----------QRPGVP 221 Query: 210 YSKTFGHGEIGVLWSCVRTD 151 +S G G V W C+ T+ Sbjct: 222 WSDASGRGSNIVRWRCLGTE 241 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,138,181 Number of Sequences: 59808 Number of extensions: 496479 Number of successful extensions: 1477 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1331 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1466 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2383424791 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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