Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E09
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-5|CAA86059.2|  405|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81074-8|CAB03043.1|  413|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z67755-8|CAE17847.1|  209|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z37983-5|CAA86059.2|  405|Caenorhabditis elegans Hypothetical
           protein B0393.6 protein.
          Length = 405

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 365 NFKIESTQTKINPGPATAVRFFVQYNTLNKAPRLLAIRLNGREICNANNPQPALESPLSS 544
           NF   ST  +I P P T ++    +    +APR+  IR+   ++   N P+  +  PL +
Sbjct: 320 NFSRSSTSLRI-PTPTTKIQKIQNFFETTRAPRISRIRMGVTDL--VNTPRRPMPHPLFT 376

Query: 545 GDSKPNRFVTA 577
             S PN    A
Sbjct: 377 --STPNNLNAA 385


>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
           protein F28B4.3 protein.
          Length = 2229

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 525 LRALCLRAIQSRTDSSQLRLVDPKHNPIEDNKLLHPLDQQ 644
           L  +CL A    +   ++R V    NP   N+L HP+ +Q
Sbjct: 10  LAVICLGAEPELSHKERIRKVLKSWNPANSNQLFHPVSEQ 49


>Z81074-8|CAB03043.1|  413|Caenorhabditis elegans Hypothetical
           protein F32B6.9 protein.
          Length = 413

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
 Frame = -1

Query: 336 IQFPSISALLSRTILSHREYNVLSV-------ETWTTPYH 238
           ++FPS+ +L+   +L+ +EY +L           W TP H
Sbjct: 150 LRFPSVHSLIESGLLTEKEYQILEAMHAENESSRWITPLH 189


>Z67755-8|CAE17847.1|  209|Caenorhabditis elegans Hypothetical
           protein F54F7.8 protein.
          Length = 209

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 303 RTILSHREYNVLSVETWTTPYHLPASDPG 217
           R+I     YN+  VE  TTP+H     PG
Sbjct: 165 RSISQTESYNLQVVENRTTPFHHTTDQPG 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,670,558
Number of Sequences: 27780
Number of extensions: 367472
Number of successful extensions: 1083
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)