Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E06
(864 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein. 159 9e-39
U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation fa... 159 1e-38
U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein. 159 1e-38
BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation ... 159 1e-38
BC107776-1|AAI07777.1| 640|Homo sapiens EIF3A protein protein. 159 1e-38
BC064926-1|AAH64926.1| 636|Homo sapiens EIF3A protein protein. 159 1e-38
BC054342-1|AAH54342.1| 812|Homo sapiens EIF3A protein protein. 159 1e-38
BC033769-1|AAH33769.1| 634|Homo sapiens EIF3A protein protein. 159 1e-38
AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation ... 159 1e-38
AK131255-1|BAD18434.1| 957|Homo sapiens protein ( Homo sapiens ... 107 5e-23
AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger ... 33 1.0
AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger ... 33 1.3
AF065482-1|AAC17181.1| 519|Homo sapiens sorting nexin 2 protein. 30 9.5
>D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein.
Length = 1388
Score = 159 bits (387), Expect = 9e-39
Identities = 100/241 (41%), Positives = 132/241 (54%), Gaps = 4/241 (1%)
Frame = +3
Query: 120 KMARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLEL 299
+M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLEL
Sbjct: 6 EMPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLEL 63
Query: 300 CVDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDD 479
CVDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +D
Sbjct: 64 CVDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIED 123
Query: 480 LDNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMI 659
LDN+ TPE + G Q+ T + P L + N +
Sbjct: 124 LDNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVER 178
Query: 660 LPRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPE 827
L H + + Y+ EF KLCD L HL I + Q + S + E
Sbjct: 179 L-YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLE 237
Query: 828 T 830
T
Sbjct: 238 T 238
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 127 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 179
>U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation
factor 3 large subunit protein.
Length = 1382
Score = 159 bits (386), Expect = 1e-38
Identities = 100/240 (41%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = +3
Query: 123 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC 302
M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 303 VDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDL 482
VDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +DL
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDL 118
Query: 483 DNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMIL 662
DN+ TPE + G Q+ T + P L + N + L
Sbjct: 119 DNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
Query: 663 PRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPET 830
H + + Y+ EF KLCD L HL I + Q + S + ET
Sbjct: 174 -YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLET 232
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
>U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein.
Length = 1382
Score = 159 bits (386), Expect = 1e-38
Identities = 100/240 (41%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = +3
Query: 123 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC 302
M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 303 VDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDL 482
VDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +DL
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDL 118
Query: 483 DNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMIL 662
DN+ TPE + G Q+ T + P L + N + L
Sbjct: 119 DNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
Query: 663 PRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPET 830
H + + Y+ EF KLCD L HL I + Q + S + ET
Sbjct: 174 -YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLET 232
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
>BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit A protein.
Length = 1382
Score = 159 bits (386), Expect = 1e-38
Identities = 100/240 (41%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = +3
Query: 123 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC 302
M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 303 VDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDL 482
VDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +DL
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDL 118
Query: 483 DNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMIL 662
DN+ TPE + G Q+ T + P L + N + L
Sbjct: 119 DNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
Query: 663 PRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPET 830
H + + Y+ EF KLCD L HL I + Q + S + ET
Sbjct: 174 -YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLET 232
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
>BC107776-1|AAI07777.1| 640|Homo sapiens EIF3A protein protein.
Length = 640
Score = 159 bits (386), Expect = 1e-38
Identities = 100/240 (41%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = +3
Query: 123 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC 302
M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 303 VDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDL 482
VDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +DL
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDL 118
Query: 483 DNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMIL 662
DN+ TPE + G Q+ T + P L + N + L
Sbjct: 119 DNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
Query: 663 PRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPET 830
H + + Y+ EF KLCD L HL I + Q + S + ET
Sbjct: 174 -YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLET 232
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
>BC064926-1|AAH64926.1| 636|Homo sapiens EIF3A protein protein.
Length = 636
Score = 159 bits (386), Expect = 1e-38
Identities = 100/240 (41%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = +3
Query: 123 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC 302
M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 303 VDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDL 482
VDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +DL
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDL 118
Query: 483 DNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMIL 662
DN+ TPE + G Q+ T + P L + N + L
Sbjct: 119 DNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
Query: 663 PRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPET 830
H + + Y+ EF KLCD L HL I + Q + S + ET
Sbjct: 174 -YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLET 232
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
>BC054342-1|AAH54342.1| 812|Homo sapiens EIF3A protein protein.
Length = 812
Score = 159 bits (386), Expect = 1e-38
Identities = 100/240 (41%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = +3
Query: 123 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC 302
M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 303 VDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDL 482
VDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +DL
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDL 118
Query: 483 DNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMIL 662
DN+ TPE + G Q+ T + P L + N + L
Sbjct: 119 DNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
Query: 663 PRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPET 830
H + + Y+ EF KLCD L HL I + Q + S + ET
Sbjct: 174 -YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLET 232
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
>BC033769-1|AAH33769.1| 634|Homo sapiens EIF3A protein protein.
Length = 634
Score = 159 bits (386), Expect = 1e-38
Identities = 100/240 (41%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = +3
Query: 123 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC 302
M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 303 VDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDL 482
VDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +DL
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDL 118
Query: 483 DNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMIL 662
DN+ TPE + G Q+ T + P L + N + L
Sbjct: 119 DNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
Query: 663 PRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPET 830
H + + Y+ EF KLCD L HL I + Q + S + ET
Sbjct: 174 -YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLET 232
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
>AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit 10 theta, 150/170kDa
protein.
Length = 1382
Score = 159 bits (386), Expect = 1e-38
Identities = 100/240 (41%), Positives = 131/240 (54%), Gaps = 4/240 (1%)
Frame = +3
Query: 123 MARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC 302
M Y QRPENALKRANEF+++ K ALD L +V ++KK W + + EPIM KYLELC
Sbjct: 1 MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHR-TW-QKIHEPIMLKYLELC 58
Query: 303 VDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDL 482
VDLRKSH+AKEGL+QY+N+ Q VN+ SLE V+R YL+MAEE+TE A+ S Q V+D +DL
Sbjct: 59 VDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDL 118
Query: 483 DNLGNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGIMIL 662
DN+ TPE + G Q+ T + P L + N + L
Sbjct: 119 DNI-----QTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
Query: 663 PRHGXSNXVXR----YSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTRNSXXXNPET 830
H + + Y+ EF KLCD L HL I + Q + S + ET
Sbjct: 174 -YHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLET 232
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 490 LATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
+ TPES+LLSAVSGED QDR+DR +LTPWVKFLWESY QCL+LLR N+ VE L
Sbjct: 121 IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERL 173
>AK131255-1|BAD18434.1| 957|Homo sapiens protein ( Homo sapiens
cDNA FLJ16186 fis, clone BRTHA2007060, moderately
similar to EUKARYOTIC TRANSLATION INITIATION FACTOR 3
SUBUNIT 10. ).
Length = 957
Score = 107 bits (257), Expect = 5e-23
Identities = 54/117 (46%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Frame = +3
Query: 141 RPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELCVDLRKS 320
+PENALKRA E +++ + AL TL ++ +K++ W ++ LE IMFKY+ELCVD+RK
Sbjct: 6 KPENALKRAEELINVGQKQDALQTLHDLITSKRYRA-WQKT-LERIMFKYVELCVDMRKG 63
Query: 321 HVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETAR--ALSTQAVIDTDDLD 485
AK+GL QYR + Q VNV SLE+VI+ +++++ E+ E AR A + + +D DDL+
Sbjct: 64 RFAKDGLIQYRIICQQVNVSSLEEVIKHFMQLSTEKAEQARSQAQALEEALDVDDLE 120
Score = 67.7 bits (158), Expect = 5e-11
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +1
Query: 499 PESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
PE ++LS VSGE +DRSDR +TPW KFLWE+Y LE+LR N+ +E L
Sbjct: 125 PEDLMLSYVSGEKGKDRSDRETVTPWFKFLWETYRTVLEILRNNSKLEAL 174
>AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2764
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 51 SVFSPKPT*NRRNCV-NEVESDIKKMARYGQRPENALKRANE-FMDLDKPARALDTLQEV 224
S+ SP+ ++N + N++E + +A GQ P + + N+ F+D K A A D +
Sbjct: 1158 SIRSPETKCPKQNSIENDIEEKVSDLASRGQEPSKSKTKGNDFFIDDSKLASADDIGTLI 1217
Query: 225 FRNKK 239
+NKK
Sbjct: 1218 CKNKK 1222
>AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2781
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 51 SVFSPKPT*NRRNCV-NEVESDIKKMARYGQRPENALKRANE-FMDLDKPARALDTLQEV 224
S+ SP+ ++N + N++E + +A GQ P + + N+ F+D K A A D +
Sbjct: 1032 SIRSPETKCPKQNSIENDIEEKVSDLASRGQEPTKSKTKGNDFFIDDSKLASADDIGTLI 1091
Query: 225 FRNKK 239
+NKK
Sbjct: 1092 CKNKK 1096
>AF065482-1|AAC17181.1| 519|Homo sapiens sorting nexin 2 protein.
Length = 519
Score = 30.3 bits (65), Expect = 9.5
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +3
Query: 249 NWSESVLEPIMFKYLELCVDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEER 428
N S++ E ++ L LRK HV+ E LF +R S N + + L +E+
Sbjct: 300 NESDAWFEEKQQQFENLDQQLRKLHVSVEALFCHRKEL-SANTAAFAK-SAAMLGNSEDH 357
Query: 429 TETARALSTQAVIDTDDLDNL 491
T +RALS A ++ + +D L
Sbjct: 358 TALSRALSQLAEVE-EKIDQL 377
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,643,933
Number of Sequences: 237096
Number of extensions: 3025838
Number of successful extensions: 6034
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6023
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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