Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E06
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 116 3e-26
AF024498-7|AAF39806.2| 279|Caenorhabditis elegans Serpentine re... 31 1.4
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 30 1.9
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 30 2.4
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 29 5.7
Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical pr... 28 7.5
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 116 bits (278), Expect = 3e-26
Identities = 82/228 (35%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Frame = +3
Query: 132 YGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELCVDL 311
Y Q+PE ALKRA E + + K + ALDTL + + ++ W+ +V E IM K++ELCVDL
Sbjct: 5 YFQKPEAALKRAEELIQVGKESDALDTLHDTIKARRHK-QWT-TVHEQIMIKHMELCVDL 62
Query: 312 RKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDLDNL 491
+K H+AK+ LFQY+ + Q +NV SLE V+ +L++AE+RTE A+ S + V + DLD
Sbjct: 63 KKQHLAKDALFQYKALTQQINVKSLETVVVHFLKLAEQRTEDAQKQSIEKVEEIGDLDQ- 121
Query: 492 GNPGEHTPECSVRRRCPGPI*QNNTHTMGEIPLGILLPMPGAPSYECSCGNLGI----MI 659
G+ PE + G Q+ P L E N +
Sbjct: 122 ---GD-VPERLLLAVVSGAAAQDRMDRTVLAPWLRFLWDSYRNCLELLRNNAQVEQLYHT 177
Query: 660 LPRHGXSNXVXRYSXXTEFXKLCDXLXEHLEDICKPTVQPVXLAFXTR 803
+ RH + RY TEF KLCD L HL I K P +F +
Sbjct: 178 ISRHSFT-FCLRYQRRTEFRKLCDLLRMHLNQIQKHQYAPNVNSFRVK 224
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +1
Query: 499 PESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETL 648
PE +LL+ VSG AQDR DRT+L PW++FLW+SY CLELLR NA VE L
Sbjct: 125 PERLLLAVVSGAAAQDRMDRTVLAPWLRFLWDSYRNCLELLRNNAQVEQL 174
>AF024498-7|AAF39806.2| 279|Caenorhabditis elegans Serpentine
receptor, class x protein104 protein.
Length = 279
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 274 QSCSNTWNFALIYVNLMLQRKVCSSTETCSNQLTLGL 384
QSC W L+ +N +L C S C+N +T+GL
Sbjct: 222 QSCFQDWIAVLVILNNILASMYCRS-HVCTNLITMGL 257
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 623 VRMLMWKPWYHDIASPWPFQFXLXV 697
+R+L+WK W + SPW F L V
Sbjct: 7 LRLLLWKNWLQQLRSPWFALFELVV 31
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 242 PFFVTENFL*GV*GPCWFVQIHELIGP 162
PFFV NF G GPC F +HEL GP
Sbjct: 581 PFFVGANF--GTSGPCSFDHLHEL-GP 604
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 242 PFFVTENFL*GV*GPCWFVQIHELIGP 162
PFFV NF G GPC F +HEL GP
Sbjct: 301 PFFVGANF--GTSGPCSFDHLHEL-GP 324
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 28.7 bits (61), Expect = 5.7
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +3
Query: 87 NCVNEVESDIKKMARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESV 266
N ++E+ ++ + E+ +AN+ +L + +A++ ++E + AYN SV
Sbjct: 359 NNIDEILNETRGNKSIAANLESRAVKANKEAELLQ--KAMEEIREALQLADQAYNNVTSV 416
Query: 267 LEPI---MFKYLELCVDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAE 422
LE I + EL R S A EG Q N + G + V YL+++E
Sbjct: 417 LEEIDTMQVQARELIDKARNSTEAVEGKAQAANTTLAELEGVMSGVKVEYLQISE 471
>Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical
protein B0393.2 protein.
Length = 585
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 63 PKPT*NRRNCVNEVESDIKKMARYGQRPENALK-RANEFMDLDKPARALDTLQEVFRNKK 239
P N +N E S I +A Q+ +N ++ R+N P R+ + L+E R +
Sbjct: 410 PPAAVNSKNDGAESPSTILALAPVFQKVKNTIRDRSNTVSGPSSPRRSNEPLREPLRTPQ 469
Query: 240 WAYNWSESV 266
NW+ V
Sbjct: 470 KKDNWANEV 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,042,690
Number of Sequences: 27780
Number of extensions: 452975
Number of successful extensions: 1048
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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