Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E06
(864 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 2.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.8
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 6.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 8.4
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 517 SAVSGEDAQDRSDRTILTPW 576
SA+ G DRS R +L PW
Sbjct: 568 SALGGWHPSDRSARLMLQPW 587
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 553 DRTILTPWVKFLWESYCQCL 612
DR ++ W+K L+ + CL
Sbjct: 287 DRYVMPSWIKMLFLQWLPCL 306
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 553 DRTILTPWVKFLWESYCQCL 612
DR ++ W+K L+ + CL
Sbjct: 287 DRYVMPSWIKMLFLQWLPCL 306
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 553 DRTILTPWVKFLWESYCQCL 612
DR ++ W+K L+ + CL
Sbjct: 287 DRYVMPSWIKMLFLQWLPCL 306
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 553 DRTILTPWVKFLWESYCQCL 612
DR ++ W+K L+ + CL
Sbjct: 287 DRYVMPSWIKMLFLQWLPCL 306
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 553 DRTILTPWVKFLWESYCQCL 612
DR ++ W+K L+ + CL
Sbjct: 287 DRYVMPSWIKMLFLQWLPCL 306
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 553 DRTILTPWVKFLWESYCQCL 612
DR ++ W+K L+ + CL
Sbjct: 287 DRYVMPSWIKMLFLQWLPCL 306
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 553 DRTILTPWVKFLWESYCQCL 612
DR ++ W+K L+ + CL
Sbjct: 355 DRYVMPSWIKMLFLQWLPCL 374
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 553 DRTILTPWVKFLWESYCQCL 612
DR ++ W+K L+ + CL
Sbjct: 355 DRYVMPSWIKMLFLQWLPCL 374
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 6.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 165 ANEFMDLDKPARALDTLQEVFRNK 236
AN LDK R+ DTL+++ +N+
Sbjct: 886 ANLTQTLDKLIRSPDTLRKIAQNR 909
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 10 WFYIVACEAGAGGIRF 57
W + +AC AG GI F
Sbjct: 487 WVFTLACTAGTLGIIF 502
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,759
Number of Sequences: 438
Number of extensions: 5986
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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