Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E05
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 209 2e-54
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 68 7e-12
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 67 1e-11
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 67 1e-11
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 67 1e-11
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 66 3e-11
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 66 3e-11
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 66 3e-11
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 66 3e-11
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 63 3e-10
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 60 3e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 59 3e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 58 1e-08
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 57 1e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 56 3e-08
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 54 1e-07
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 54 1e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 54 2e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 54 2e-07
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 53 2e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 53 3e-07
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 53 3e-07
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 53 3e-07
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 53 3e-07
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 53 3e-07
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 52 7e-07
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 51 9e-07
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 51 9e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 51 1e-06
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 50 2e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 50 3e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 50 3e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 50 3e-06
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 49 4e-06
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 49 5e-06
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 47 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 3e-05
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 46 5e-05
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 46 5e-05
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 46 5e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 46 5e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 46 5e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 46 5e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 46 5e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 46 5e-05
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 45 6e-05
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 44 1e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 44 1e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 44 1e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 43 2e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 42 4e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 42 4e-04
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 42 7e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 41 0.001
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 41 0.001
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 41 0.001
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 40 0.002
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 40 0.002
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 40 0.002
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 40 0.002
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 40 0.002
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 39 0.004
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 39 0.004
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 39 0.004
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 39 0.005
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 39 0.005
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 39 0.005
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 38 0.009
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 38 0.009
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 36 0.028
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 36 0.028
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 36 0.037
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 36 0.037
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 36 0.037
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 35 0.064
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 34 0.11
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 34 0.15
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 34 0.15
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 31 1.0
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 31 1.0
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 1.4
U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical pr... 30 2.4
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 30 2.4
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.2
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 29 3.2
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 29 5.6
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 29 5.6
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 29 5.6
Z49967-9|CAA90256.1| 328|Caenorhabditis elegans Hypothetical pr... 28 9.7
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 209 bits (511), Expect = 2e-54
Identities = 108/226 (47%), Positives = 143/226 (63%), Gaps = 2/226 (0%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D+S RSVFVGNI Y+ +E+ ++ IFS+ G VLS K+V DRETGKPKGYGF E+ D +TA
Sbjct: 14 DRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAE 73
Query: 342 SAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQ--VENPYGDPVEPEKAPEAISK 515
A+RNLNGYE+ GR LRVD+A + E + P ENPYG + KAPE IS+
Sbjct: 74 VAIRNLNGYELSGRILRVDSAAGGMNMEEFGSSSNAPAPVEENPYGPECDAGKAPERISQ 133
Query: 516 AVATLPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTM 695
VA+L PE+MFELMKQ++ ++NNP+E L+++PQ+AYA+LQA V+MRIVDP TA+ +
Sbjct: 134 TVASLAPEKMFELMKQLQESLKNNPSELHKFLVEHPQIAYAVLQAAVVMRIVDPQTALGL 193
Query: 696 LHPSNPVPPNLTTGVIXQPKRXLIYHPXPXPAQPXIXXXPGPXTXP 833
LH + + P P +P PGP P
Sbjct: 194 LHRNKAATLTPFHNTPQGAPPMVQQQQMPMPPKPTF-AHPGPSMGP 238
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGN+PY+ TEE++ + F+ VG V + ++V+DRETG+P+G+ F E+ ++ A A+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 357 LNGYEIGGRSLRVDNA 404
LNG GR+LRV+ A
Sbjct: 67 LNGVAFNGRNLRVNYA 82
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 81.0 bits (191), Expect = 1e-15
Identities = 34/76 (44%), Positives = 54/76 (71%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGN P++ TEE+L + FS +G + + ++V DRETG+P+G+ F E+ ++ +A A+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 357 LNGYEIGGRSLRVDNA 404
+NG E GR LRV+ A
Sbjct: 66 MNGAEFNGRPLRVNLA 81
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/76 (43%), Positives = 52/76 (68%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGN P++ TE+ L + FS+ G V + ++V DRETG+P+G+ F E+ ++ A A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 357 LNGYEIGGRSLRVDNA 404
NG + GR+LRV+ A
Sbjct: 65 FNGVDFNGRALRVNLA 80
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 68.1 bits (159), Expect = 7e-12
Identities = 37/134 (27%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSMRS--VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
+S++KEE+++ +K + + +F+ N+PY E+ L+ +F + G V ++V D++TG KG
Sbjct: 262 ESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKG 321
Query: 303 YGFCEYKDQETALSAMRNLNGYEIGGRSLRV---DNACTEKSRMEMQALMQGPQVENPYG 473
+ E+ E A++A L+GY GR + + D T++ E + + P +NP
Sbjct: 322 FAIVEFVFPEAAVAAYSALDGYVFKGRMMHILPGDEKRTKEGEEESEVVPDDP--DNPLK 379
Query: 474 DPVEPEKAPEAISK 515
+ EK ++ +
Sbjct: 380 AEAKKEKKKKSFKE 393
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+ V N+P TE++L+ F + G + L + +E GK +G+ F + D+ +A +A+
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAKS 63
Query: 360 NGYEIGGRSLRVD 398
N + L V+
Sbjct: 64 NQTFFNSKKLTVE 76
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/102 (21%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 135 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKL-VFDRETGKPKGYGF 311
K KE + + V N+P+EA+ ++++ +F G V + ++ + + +G+GF
Sbjct: 735 KRKEVKQKEQGECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGF 794
Query: 312 CEYKDQETALSAMRNL-NGYEIGGRSLRVDNACTEKSRMEMQ 434
++ + A A +L + + GR L ++ A +++ E++
Sbjct: 795 VDFISADEAHRAFDSLVHSTHLYGRRLVLEWAKDDETVEELR 836
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/97 (31%), Positives = 54/97 (55%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
M ++VG+I +E E+ L+ F GP+ S + +D TG K + F EY+ E AL A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 351 RNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 461
++NG +GGR+L+V++ ++ R+ P ++
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIID 197
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKP-KGYGFCEYKDQETALSAMRN 356
V+V ++ + +E LK +F G ++ +L TG+ +G+G+ E+ + + A+
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLA-RAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 357 LNGYEIGGRSLR 392
+N +++GG+ LR
Sbjct: 268 MNMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/97 (31%), Positives = 54/97 (55%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
M ++VG+I +E E+ L+ F GP+ S + +D TG K + F EY+ E AL A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 351 RNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 461
++NG +GGR+L+V++ ++ R+ P ++
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIID 197
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKP-KGYGFCEYKDQETALSAMRN 356
V+V ++ + +E LK +F G ++ +L TG+ +G+G+ E+ + + A+
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLA-RAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 357 LNGYEIGGRSLRVDNACT 410
+N +++GG+ LRV T
Sbjct: 268 MNMFDLGGQYLRVGKCVT 285
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/97 (31%), Positives = 54/97 (55%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
M ++VG+I +E E+ L+ F GP+ S + +D TG K + F EY+ E AL A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 351 RNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 461
++NG +GGR+L+V++ ++ R+ P ++
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIID 197
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKP-KGYGFCEYKDQETALSAMRN 356
V+V ++ + +E LK +F G ++ +L TG+ +G+G+ E+ + + A+
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLA-RAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 357 LNGYEIGGRSLRVDNACT 410
+N +++GG+ LRV T
Sbjct: 268 MNMFDLGGQYLRVGKCVT 285
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +3
Query: 126 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGY 305
D + +I+ S +F+G +P TE+++K++ GP+ +F L D + G KGY
Sbjct: 275 DMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGY 333
Query: 306 GFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
F EY D A+ LNG ++G + L V AC + R
Sbjct: 334 AFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 372
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSE 242
R ++VGNIP+ EE + D F++
Sbjct: 184 RRLYVGNIPFGCNEEAMLDFFNQ 206
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/74 (36%), Positives = 47/74 (63%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+++G + Y +E + +FS+ G V++ L+ D++TGK KG+ F YKDQ + + A+ N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 360 NGYEIGGRSLRVDN 401
NG + R +RVD+
Sbjct: 100 NGISLHKRMIRVDH 113
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +3
Query: 126 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGY 305
D + +I+ S +F+G +P TE+++K++ GP+ +F L D + G KGY
Sbjct: 275 DMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGY 333
Query: 306 GFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
F EY D A+ LNG ++G + L V AC + R
Sbjct: 334 AFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 372
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSE 242
R ++VGNIP+ EE + D F++
Sbjct: 184 RRLYVGNIPFGCNEEAMLDFFNQ 206
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +3
Query: 126 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGY 305
D + +I+ S +F+G +P TE+++K++ GP+ +F L D + G KGY
Sbjct: 250 DMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGY 308
Query: 306 GFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
F EY D A+ LNG ++G + L V AC + R
Sbjct: 309 AFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 347
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSE 242
R ++VGNIP+ EE + D F++
Sbjct: 159 RRLYVGNIPFGCNEEAMLDFFNQ 181
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +3
Query: 126 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGY 305
D + +I+ S +F+G +P TE+++K++ GP+ +F L D + G KGY
Sbjct: 253 DMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGY 311
Query: 306 GFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
F EY D A+ LNG ++G + L V AC + R
Sbjct: 312 AFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 350
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSE 242
R ++VGNIP+ EE + D F++
Sbjct: 162 RRLYVGNIPFGCNEEAMLDFFNQ 184
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/95 (35%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +3
Query: 114 IIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFS-EVGPVLSFKLVFDRETG 290
+I++DK K+++ K M ++FVGN+P+E TE+ L FS ++GPV + ++V D++TG
Sbjct: 229 VIRVDKVGSKKKE--FGKDM-AIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTG 285
Query: 291 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 395
K KG+ F +K Q++++S ++ ++ R LR+
Sbjct: 286 KGKGFAFVNFK-QDSSVSLALSMETIKMEKRDLRI 319
Score = 35.1 bits (77), Expect = 0.064
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Frame = +3
Query: 120 KMDKSKEKEEQSIMDKSMRS--------VFVGNIPYEATEEKLKDIFSEVGPVLSFKL 269
K D++K++E +++ + R+ VFVGN+P E+ ++ IFS+ G + S ++
Sbjct: 117 KRDRTKQRENRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R++FVG I YE +E KL+ F G + +V D E GKP+GY F EY D+ +A +
Sbjct: 104 RTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDKAEMHTAYK 162
Query: 354 NLNGYEIGGRSLRVD 398
+G ++ G+ L VD
Sbjct: 163 KADGIKVDGKRLVVD 177
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 144 EEQSIMDKSMR-SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
++QS +D + VFVG++ E +KL++ F G V K++ D T K KGYGF Y
Sbjct: 11 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVDNACTEK 416
+E A A+ +NG +G R++R N T K
Sbjct: 71 PKREEAERAIEQMNGQWLGRRTIRT-NWATRK 101
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/72 (27%), Positives = 41/72 (56%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGNI TE++++ F+ G + ++ K +GY F ++ +++ A A+
Sbjct: 129 SVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQ 181
Query: 357 LNGYEIGGRSLR 392
+N ++GG+ +R
Sbjct: 182 MNNQDVGGQLVR 193
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 144 EEQSIMDKSMR-SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
++QS +D + VFVG++ E +KL++ F G V K++ D T K KGYGF Y
Sbjct: 21 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVDNACTEK 416
+E A A+ +NG +G R++R N T K
Sbjct: 81 PKREEAERAIEQMNGQWLGRRTIRT-NWATRK 111
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/72 (27%), Positives = 41/72 (56%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGNI TE++++ F+ G + ++ K +GY F ++ +++ A A+
Sbjct: 139 SVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQ 191
Query: 357 LNGYEIGGRSLR 392
+N ++GG+ +R
Sbjct: 192 MNNQDVGGQLVR 203
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 144 EEQSIMDKSMR-SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
++QS +D + VFVG++ E +KL++ F G V K++ D T K KGYGF Y
Sbjct: 124 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVDNACTEK 416
+E A A+ +NG +G R++R N T K
Sbjct: 184 PKREEAERAIEQMNGQWLGRRTIRT-NWATRK 214
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/75 (29%), Positives = 42/75 (56%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R+++VGN+ TE+ + +F+++G V K++FD G Y F E+ D A A++
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQ 102
Query: 354 NLNGYEIGGRSLRVD 398
+N + R ++V+
Sbjct: 103 TMNKRLLLDREMKVN 117
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/72 (27%), Positives = 41/72 (56%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGNI TE++++ F+ G + ++ K +GY F ++ +++ A A+
Sbjct: 242 SVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQ 294
Query: 357 LNGYEIGGRSLR 392
+N ++GG+ +R
Sbjct: 295 MNNQDVGGQLVR 306
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 144 EEQSIMDKSMR-SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
++QS +D + VFVG++ E +KL++ F G V K++ D T K KGYGF Y
Sbjct: 92 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVDNACTEK 416
+E A A+ +NG +G R++R N T K
Sbjct: 152 PKREEAERAIEQMNGQWLGRRTIRT-NWATRK 182
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/72 (27%), Positives = 41/72 (56%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGNI TE++++ F+ G + ++ K +GY F ++ +++ A A+
Sbjct: 210 SVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQ 262
Query: 357 LNGYEIGGRSLR 392
+N ++GG+ +R
Sbjct: 263 MNNQDVGGQLVR 274
Score = 35.9 bits (79), Expect = 0.037
Identities = 21/76 (27%), Positives = 41/76 (53%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R+++VGN+ TE+ + +F+++G V K++FD + K E Q++ + R
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD----EMKVNWAVEPGQQQSKIDTTR 101
Query: 354 NLNGYEIGGRSLRVDN 401
+ + + +G S VDN
Sbjct: 102 HFHVF-VGDLSSEVDN 116
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/80 (32%), Positives = 49/80 (61%)
Frame = +3
Query: 165 KSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALS 344
+S ++ + +P T+E+++ +F+ +G + S KLV D+ TG+ GYGF Y +E AL
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 345 AMRNLNGYEIGGRSLRVDNA 404
A+ + NG + ++++V A
Sbjct: 99 AVSSFNGLRLQNKTIKVSYA 118
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FV N+ + + L +FS+ G +++ K++ D T + KGY F + A +AM +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 360 NGYEIGGRSLRV 395
NG + G++L+V
Sbjct: 435 NGTNLAGKTLQV 446
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/80 (36%), Positives = 49/80 (61%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
VFVG++ + + E LK F++ G V K++ D +T K KGYGF + +++ A +A+ +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 360 NGYEIGGRSLRVDNACTEKS 419
NG IG R++R + A + S
Sbjct: 197 NGKWIGKRAVRTNWAARKNS 216
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGNI + T+ L+D+FS G + ++ K + Y F Y+ +E A A+
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECATKAIME 291
Query: 357 LNGYEIGGRSLR 392
+NG E+ G +R
Sbjct: 292 MNGKEMAGNQVR 303
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
VFV NI EATE+ + D FSE G + + L DR TG KGY EY+ Q+ A A+
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 360 NGYEIGGRSLRVD 398
N ++ G++++VD
Sbjct: 117 NDTDLLGQNVKVD 129
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 59.3 bits (137), Expect = 3e-09
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 3/242 (1%)
Frame = +3
Query: 117 IKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSF-KLVFDRETGK 293
IK++K+ E+ MD ++FVGN+ E E+ L D FS G +L K++ D ++G
Sbjct: 84 IKVNKASAHEKN--MDVGA-NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGT 140
Query: 294 PKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQ--ALMQGPQVENP 467
KG+ F + E + +A+ +NG + R++ V A S+ E A + +NP
Sbjct: 141 SKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNP 200
Query: 468 YGDPVEPEKAPEAISKAVATLPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQ 647
P + + V P M + + P L+ Q Y Q
Sbjct: 201 LFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGY---Q 257
Query: 648 AQVIMRIVDPATAVTMLHPSNPVPPNLTTGVIXQPKRXLIYHPXPXPAQPXIXXXPGPXT 827
Q + P +VT + P P+PP T G+ +P P P P PGP
Sbjct: 258 GQ-YPPVPPPPPSVTPMPP--PMPP--TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG 312
Query: 828 XP 833
P
Sbjct: 313 MP 314
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/87 (28%), Positives = 51/87 (58%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
+++VG + + +E L ++ + GPV+S + DR T +G+GF E+ +E A A++
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 357 LNGYEIGGRSLRVDNACTEKSRMEMQA 437
LN ++ G+ ++V+ A + M++ A
Sbjct: 74 LNMIKLYGKPIKVNKASAHEKNMDVGA 100
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 59.3 bits (137), Expect = 3e-09
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 3/242 (1%)
Frame = +3
Query: 117 IKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSF-KLVFDRETGK 293
IK++K+ E+ MD ++FVGN+ E E+ L D FS G +L K++ D ++G
Sbjct: 94 IKVNKASAHEKN--MDVGA-NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGT 150
Query: 294 PKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQ--ALMQGPQVENP 467
KG+ F + E + +A+ +NG + R++ V A S+ E A + +NP
Sbjct: 151 SKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNP 210
Query: 468 YGDPVEPEKAPEAISKAVATLPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQ 647
P + + V P M + + P L+ Q Y Q
Sbjct: 211 LFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGY---Q 267
Query: 648 AQVIMRIVDPATAVTMLHPSNPVPPNLTTGVIXQPKRXLIYHPXPXPAQPXIXXXPGPXT 827
Q + P +VT + P P+PP T G+ +P P P P PGP
Sbjct: 268 GQ-YPPVPPPPPSVTPMPP--PMPP--TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG 322
Query: 828 XP 833
P
Sbjct: 323 MP 324
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/87 (28%), Positives = 51/87 (58%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
+++VG + + +E L ++ + GPV+S + DR T +G+GF E+ +E A A++
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 357 LNGYEIGGRSLRVDNACTEKSRMEMQA 437
LN ++ G+ ++V+ A + M++ A
Sbjct: 84 LNMIKLYGKPIKVNKASAHEKNMDVGA 110
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
VFVG++ E KL++ F + G V K++ D T K KGYGF Y +E A A+ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 360 NGYEIGGRSLRVDNACTEK 416
NG +G R++R N T K
Sbjct: 194 NGAWLGRRTIRT-NWATRK 211
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/72 (31%), Positives = 41/72 (56%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
SV+VGNI E++++ F GP+ + T K +GY F +++ +E+A A+
Sbjct: 257 SVYVGNIA-NLGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQ 309
Query: 357 LNGYEIGGRSLR 392
+N +IGG+ +R
Sbjct: 310 MNNADIGGQIVR 321
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 117 IKMDKSKEKEEQSIMDKSMRS-VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGK 293
++M +QS K S VFVGNI + ++E ++ I +E G V S+K + GK
Sbjct: 27 MRMPGQHTPAQQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRI-KGSNGK 85
Query: 294 PKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 395
+G+GFC + D E L A+R L+ + +G + L V
Sbjct: 86 LQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTV 119
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 117 IKMDKSKEKEEQSIMDKSMRS-VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGK 293
++M +QS K S VFVGNI + ++E ++ I +E G V S+K + GK
Sbjct: 27 MRMPGQHTPAQQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRI-KGSNGK 85
Query: 294 PKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 395
+G+GFC + D E L A+R L+ + +G + L V
Sbjct: 86 LQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTV 119
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/87 (33%), Positives = 49/87 (56%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R+++VG + TE+ L F G V++ + D E+GK +G+GF E+ E A A+
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAID 70
Query: 354 NLNGYEIGGRSLRVDNACTEKSRMEMQ 434
N+N E+ G+++RV+ A K+ Q
Sbjct: 71 NMNESELFGKTIRVNFARPPKATERSQ 97
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D +FVG +PY +++ L + F + G + ++ DR T K +GYGF KD+ +A
Sbjct: 31 DTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAE 90
Query: 342 SAMRNLNGYEIGGRSLRVDNA---CTEKSRMEMQALMQGPQVENP 467
A ++ N I GR V+ A ++ +++ AL G QV+ P
Sbjct: 91 RACKDPNPI-IDGRKANVNLAYLGAKPRTNVQLAALAAG-QVQLP 133
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/84 (33%), Positives = 47/84 (55%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
+SV+VGN+ Y AT E+++ F G V + DR +G PKG+ + E+ ++E +A+
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALA 137
Query: 354 NLNGYEIGGRSLRVDNACTEKSRM 425
+ + GR ++VD T K M
Sbjct: 138 MTDSL-LRGRQIKVDPKRTNKPGM 160
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
+ V+VGN+P + E++++DIF + G + K V D ++G+ + F E++D A A+R
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRI---KYV-DIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 354 NLNGYEIGGRSLRVD 398
+GYE GR +RV+
Sbjct: 65 ARDGYEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
+ V+VGN+P + E++++DIF + G + K V D ++G+ + F E++D A A+R
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRI---KYV-DIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 354 NLNGYEIGGRSLRVD 398
+GYE GR +RV+
Sbjct: 65 ARDGYEFDGRRIRVE 79
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +3
Query: 186 VGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNG 365
V N+ TE+ L+D+F E G + LV+DR +G +G+GF + E A +A L
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 366 YEIGGRSLRVDNACTEK 416
++ G +RVD + T++
Sbjct: 140 TDLDGHKIRVDFSLTKR 156
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
K E + ++ R++ + I + L++ FS VG V +++ D TG+ KG + E+
Sbjct: 14 KLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
D+E+ + LNG + G L++ C E++R
Sbjct: 74 WDEESVPLGLA-LNGQRLMGAPLQIQRTCAERNR 106
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
K E + ++ R++ + I + L++ FS VG V +++ D TG+ KG + E+
Sbjct: 159 KLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
D+E+ + LNG + G L++ C E++R
Sbjct: 219 WDEESVPLGLA-LNGQRLMGAPLQIQRTCAERNR 251
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/71 (32%), Positives = 42/71 (59%)
Frame = +3
Query: 186 VGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNG 365
V N+P E E++L+D+F ++G V+ + D+ TG PKG+ F ++ ++ A A+ LN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 366 YEIGGRSLRVD 398
+ L+V+
Sbjct: 240 IRMYHMVLKVE 250
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
++VG+IP + E+ L +F + G + +L+ D +G +GY F Y ++E A +A +
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 360 NGYEIG-GRSLRVD 398
+G+EI G+ L+V+
Sbjct: 262 DGHEISTGKPLKVN 275
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/90 (27%), Positives = 49/90 (54%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D++ VF G++ E ++E L F + K+V + T K KGYGF ++D E +
Sbjct: 199 DENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYV 258
Query: 342 SAMRNLNGYEIGGRSLRVDNACTEKSRMEM 431
AMR ++G +G R +++ + ++ +++
Sbjct: 259 RAMREMDGKYVGNRPIKLRKSAWKERNIDV 288
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
+VFV N +EKL +FS+ G + S ++ D + GKPKG+GF + DQ+ A A+
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEK 297
Query: 357 LNGYEIGGRSLRVDNACTEKSRMEMQA 437
LN + G ++ + C + + E A
Sbjct: 298 LNDSILEGTDCKL-SVCRAQKKSERSA 323
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ N+ + + D FS G +LS K+ D E G KGYGF ++ + +A +A+
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEK 204
Query: 357 LNGYEIGGRSLRVDNACTEKSRME 428
+NG + + + V RM+
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMK 228
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +3
Query: 168 SMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSA 347
SM S+++G++ + +E L + FS GPVLS ++ D + GY + ++ A A
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERA 114
Query: 348 MRNLNGYEIGGRSLRV 395
+ +N I GR +R+
Sbjct: 115 LDTMNFEVIHGRPMRI 130
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
+VFV N +EKL +FS+ G + S ++ D + GKPKG+GF + DQ+ A A+
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEK 297
Query: 357 LNGYEIGGRSLRVDNACTEKSRMEMQA 437
LN + G ++ + C + + E A
Sbjct: 298 LNDSILEGTDCKL-SVCRAQKKSERSA 323
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ N+ + + D FS G +LS K+ D E G KGYGF ++ + +A +A+
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEK 204
Query: 357 LNGYEIGGRSLRVDNACTEKSRME 428
+NG + + + V RM+
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMK 228
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +3
Query: 168 SMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSA 347
SM S+++G++ + +E L + FS GPVLS ++ D + GY + ++ A A
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERA 114
Query: 348 MRNLNGYEIGGRSLRV 395
+ +N I GR +R+
Sbjct: 115 LDTMNFEVIHGRPMRI 130
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/73 (30%), Positives = 46/73 (63%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ ++P + + L + F+ G +LS K+ D+ T K +GF Y++ ++A +A+
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 357 LNGYEIGGRSLRV 395
+NG++IG + L+V
Sbjct: 396 MNGFQIGSKRLKV 408
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/73 (30%), Positives = 46/73 (63%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ ++P + + L + F+ G +LS K+ D+ T K +GF Y++ ++A +A+
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 357 LNGYEIGGRSLRV 395
+NG++IG + L+V
Sbjct: 560 MNGFQIGSKRLKV 572
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/108 (24%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F + ++ A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAV 196
Query: 342 SAMRNL-NGYEIGGRS--LRVDNACTEKSR-MEMQALMQGPQVENPYG 473
A + + + + G S L V A T+K + ++ ++++ G +P G
Sbjct: 197 VATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGAGSPKG 244
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/73 (30%), Positives = 46/73 (63%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ ++P + + L + F+ G +LS K+ D+ T K +GF Y++ ++A +A+
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 357 LNGYEIGGRSLRV 395
+NG++IG + L+V
Sbjct: 560 MNGFQIGSKRLKV 572
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/108 (24%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F + ++ A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAV 196
Query: 342 SAMRNL-NGYEIGGRS--LRVDNACTEKSR-MEMQALMQGPQVENPYG 473
A + + + + G S L V A T+K + ++ ++++ G +P G
Sbjct: 197 VATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGAGSPKG 244
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/73 (30%), Positives = 46/73 (63%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ ++P + + L + F+ G +LS K+ D+ T K +GF Y++ ++A +A+
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 357 LNGYEIGGRSLRV 395
+NG++IG + L+V
Sbjct: 489 MNGFQIGSKRLKV 501
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/108 (24%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F + ++ A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAV 196
Query: 342 SAMRNL-NGYEIGGRS--LRVDNACTEKSR-MEMQALMQGPQVENPYG 473
A + + + + G S L V A T+K + ++ ++++ G +P G
Sbjct: 197 VATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGAGSPKG 244
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/73 (30%), Positives = 46/73 (63%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ ++P + + L + F+ G +LS K+ D+ T K +GF Y++ ++A +A+
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 357 LNGYEIGGRSLRV 395
+NG++IG + L+V
Sbjct: 560 MNGFQIGSKRLKV 572
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/108 (24%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F + ++ A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAV 196
Query: 342 SAMRNL-NGYEIGGRS--LRVDNACTEKSR-MEMQALMQGPQVENPYG 473
A + + + + G S L V A T+K + ++ ++++ G +P G
Sbjct: 197 VATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGAGSPKG 244
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/108 (25%), Positives = 56/108 (51%)
Frame = +3
Query: 108 HTIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRET 287
H +++ + + Q +R +F+G + ++ T+E+L + FS+ GPV+ ++ D T
Sbjct: 47 HQMLRFQQMGMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNT 106
Query: 288 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEM 431
+G+GF + +A SAM N +++GG+++ A + M
Sbjct: 107 KHSRGFGFVTFASIFSAESAM-NDRPHKLGGKTVDSKRAIPREQMSSM 153
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 51.2 bits (117), Expect = 9e-07
Identities = 30/90 (33%), Positives = 48/90 (53%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R + V NIP++ E L +F +VGPV+ +++F+ E G KG+GF ++ + A A
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERGS-KGFGFVTMQNPDDADRARA 157
Query: 354 NLNGYEIGGRSLRVDNACTEKSRMEMQALM 443
NG I GR + V+ A + + LM
Sbjct: 158 EFNGTTIEGRRVEVNLATQRVHNKKAKPLM 187
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 51.2 bits (117), Expect = 9e-07
Identities = 30/90 (33%), Positives = 48/90 (53%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R + V NIP++ E L +F +VGPV+ +++F+ E G KG+GF ++ + A A
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERGS-KGFGFVTMQNPDDADRARA 157
Query: 354 NLNGYEIGGRSLRVDNACTEKSRMEMQALM 443
NG I GR + V+ A + + LM
Sbjct: 158 EFNGTTIEGRRVEVNLATQRVHNKKAKPLM 187
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/73 (30%), Positives = 46/73 (63%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ ++P E + +L +F+ G ++S K+ DR T + K +GF Y + ++ +A+
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 357 LNGYEIGGRSLRV 395
+NG++IG + L+V
Sbjct: 490 MNGFQIGMKRLKV 502
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/73 (30%), Positives = 46/73 (63%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ ++P E + +L +F+ G ++S K+ DR T + K +GF Y + ++ +A+
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 357 LNGYEIGGRSLRV 395
+NG++IG + L+V
Sbjct: 490 MNGFQIGMKRLKV 502
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/87 (28%), Positives = 49/87 (56%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
+R +F+G + ++ T+E+L + FS+ GPV+ ++ D T +G+GF + +A SAM
Sbjct: 48 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
Query: 351 RNLNGYEIGGRSLRVDNACTEKSRMEM 431
N +++GG+++ A + M
Sbjct: 108 -NDRPHKLGGKTVDSKRAIPREQMSSM 133
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/87 (28%), Positives = 49/87 (56%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
+R +F+G + ++ T+E+L + FS+ GPV+ ++ D T +G+GF + +A SAM
Sbjct: 69 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
Query: 351 RNLNGYEIGGRSLRVDNACTEKSRMEM 431
N +++GG+++ A + M
Sbjct: 129 -NDRPHKLGGKTVDSKRAIPREQMSSM 154
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ N+ + + D FS G +LS K+ D E G KGYGF ++ +E A +A++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQK 179
Query: 357 LNGYEIGGRSLRV 395
+NG + G+ + V
Sbjct: 180 VNGMLLAGKKVFV 192
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +3
Query: 144 EEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYK 323
+ Q+ +M S++VG++ + E L + FS GPVLS ++ D T GY + ++
Sbjct: 22 QNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Query: 324 DQETALSAMRNLNGYEIGGRSLRV 395
A AM +N + G+ +R+
Sbjct: 82 QPADAERAMDTMNFEALHGKPMRI 105
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ N+ + + D FS G +LS K+ D E G KGYGF ++ +E A +A++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQK 116
Query: 357 LNGYEIGGRSLRV 395
+NG + G+ + V
Sbjct: 117 VNGMLLAGKKVFV 129
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ N+ + + D FS G +LS K+ D E G KGYGF ++ +E A +A++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQK 179
Query: 357 LNGYEIGGRSLRV 395
+NG + G+ + V
Sbjct: 180 VNGMLLAGKKVFV 192
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +3
Query: 144 EEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYK 323
+ Q+ +M S++VG++ + E L + FS GPVLS ++ D T GY + ++
Sbjct: 22 QNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Query: 324 DQETALSAMRNLNGYEIGGRSLRV 395
A AM +N + G+ +R+
Sbjct: 82 QPADAERAMDTMNFEALHGKPMRI 105
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
K Q+ + + VF+G + +T E +K F G V L+FD+ T + +G+GF +
Sbjct: 123 KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA-LMQGPQVENPYGDPVE 485
E A + ++ +EI G+ + A ++ + +Q + N YG P E
Sbjct: 183 DSDEVA-DKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPE 237
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+F+G + ++ T E L+D F G V ++ D T + +G+GF + D + + N
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN- 105
Query: 360 NGYEIGGRSL 389
+E+ G+ +
Sbjct: 106 REHELDGKKI 115
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
K Q+ + + VF+G + +T E +K F G V L+FD+ T + +G+GF +
Sbjct: 123 KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA-LMQGPQVENPYGDPVE 485
E A + ++ +EI G+ + A ++ + +Q + N YG P E
Sbjct: 183 DSDEVA-DKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPE 237
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+F+G + ++ T E L+D F G V ++ D T + +G+GF + D + + N
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN- 105
Query: 360 NGYEIGGRSL 389
+E+ G+ +
Sbjct: 106 REHELDGKKI 115
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R VF+ NI YEA LK + E G ++F + + GKPKG E++ +E A +
Sbjct: 45 RMVFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGKPKGNAVVEFETREGAEKCVE 104
Query: 354 NLNGYEIGGRSL 389
NL ++ GR++
Sbjct: 105 NLQKFDWKGRTI 116
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+F+ N+ + +KL ++F G + D+E GK KG +Y A+ A+ L
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKE-GKSKGVCVIQYTHPIEAVQAVSML 248
Query: 360 NGYEIGGRSLRV 395
NG + R+L V
Sbjct: 249 NGQRLFDRNLVV 260
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +3
Query: 144 EEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYK 323
EEQ D RSV+VGN+ +++T ++++ F+ G V + D+ TG K + F E++
Sbjct: 38 EEQEKTDA--RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 324 DQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQ--VENPYGDP 479
E+ A+ L+G R + V T K M A Q P ++ +G P
Sbjct: 96 KLESVQLAL-VLSGTMFRNRKIMVTLKRTNKPGMGRTATAQKPAHFAKSSHGKP 148
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
VFV N+ ++AT+++LK +FS+ G V S + V ++ GKPKG F ++ + +A + +
Sbjct: 685 VFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKD-GKPKGIAFVDFDTEASAQKCVASG 743
Query: 360 NGYEIGGRSLRV 395
+ + R L V
Sbjct: 744 DKLMLRERELEV 755
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +3
Query: 144 EEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYK 323
+ Q+ +M S++VG++ + E L + FS GPVLS ++ D T GY + ++
Sbjct: 22 QNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Query: 324 DQETALSAMRNLNGYEIGGRSLRV 395
A AM +N + G+ +R+
Sbjct: 82 QPADAERAMDTMNFEALHGKPMRI 105
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
V+VG +P +AT ++L++IF G + K+ R +P G+ F EY D A A+R L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVAR---RPPGFAFVEYDDVRDAEDAVRAL 59
Query: 360 NGYEIGGRSLRVD 398
+G I G RV+
Sbjct: 60 DGSRICGVRARVE 72
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
V+VG +P +AT ++L++IF G + K+ R +P G+ F EY D A A+R L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVAR---RPPGFAFVEYDDVRDAEDAVRAL 59
Query: 360 NGYEIGGRSLRVD 398
+G I G RV+
Sbjct: 60 DGSRICGVRARVE 72
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
V+VG +P +AT ++L++IF G + K+ R +P G+ F EY D A A+R L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVAR---RPPGFAFVEYDDVRDAEDAVRAL 59
Query: 360 NGYEIGGRSLRVD 398
+G I G RV+
Sbjct: 60 DGSRICGVRARVE 72
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/67 (25%), Positives = 40/67 (59%)
Frame = +3
Query: 135 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFC 314
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 315 EYKDQET 335
+ D ++
Sbjct: 161 TFDDHDS 167
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/67 (25%), Positives = 40/67 (59%)
Frame = +3
Query: 135 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFC 314
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 315 EYKDQET 335
+ D ++
Sbjct: 123 TFDDHDS 129
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/67 (25%), Positives = 40/67 (59%)
Frame = +3
Query: 135 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFC 314
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 315 EYKDQET 335
+ D ++
Sbjct: 123 TFDDHDS 129
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/67 (25%), Positives = 40/67 (59%)
Frame = +3
Query: 135 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFC 314
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 315 EYKDQET 335
+ D ++
Sbjct: 161 TFDDHDS 167
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/67 (25%), Positives = 40/67 (59%)
Frame = +3
Query: 135 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFC 314
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 315 EYKDQET 335
+ D ++
Sbjct: 161 TFDDHDS 167
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R +++ N+PY+ T E++ +IF + G V ++ T + +G F Y+D A +A
Sbjct: 19 RILYIKNLPYKITTEEMYEIFGKFGAVRQIRV---GNTAETRGTAFVVYEDIFDAKTACE 75
Query: 354 NLNGYEIGGRSLRV 395
+L+GY + R L V
Sbjct: 76 HLSGYNVSNRYLVV 89
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
+EEQ +D +SVF+GN+ + +T E++++ F G ++ + D+ T K K + + E+
Sbjct: 46 EEEQKAIDA--KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEF 103
Query: 321 KDQETALSAM 350
D + +A+
Sbjct: 104 DDSSSIENAL 113
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYG 308
K K E + + + VFVG +P + +E+ L+ F + G V + FD++T + +
Sbjct: 95 KGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFA 154
Query: 309 FCEYKDQETA 338
F ++++E+A
Sbjct: 155 FIVFEEEESA 164
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
+ +FVG I E E L F++ G V ++ +DR G+ +G+ F E+ E A+
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 354 NLNGYEIGGRSLRVDNACTEKSR 422
I G+S+ V A + +++
Sbjct: 89 -AREQTIKGKSVEVKPAKSRENK 110
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYG 308
K K E + + + VFVG +P + +E+ L+ F + G V + FD++T + +
Sbjct: 95 KGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFA 154
Query: 309 FCEYKDQETA 338
F ++++E+A
Sbjct: 155 FIVFEEEESA 164
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
+ +FVG I E E L F++ G V ++ +DR G+ +G+ F E+ E A+
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 354 NLNGYEIGGRSLRVDNACTEKSR 422
I G+S+ V A + +++
Sbjct: 89 -AREQTIKGKSVEVKPAKSRENK 110
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSMRSVFV---GNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPK 299
+ + +++ + K ++ ++V IP+ E++L F + G VL ++ +R TG K
Sbjct: 14 RKQPQKQDKVQKKQLKKIYVVKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHK 73
Query: 300 GYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT-EKSRMEMQALMQGP 452
G+ + + ++ A A ++NGY + + L CT K + +A+ GP
Sbjct: 74 GWAYVGFDNKAVAEIAAESMNGYLMFEQRL----GCTVMKPELIPKAMRHGP 121
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +3
Query: 183 FVGNIPYEATEEKLKDIFS------EVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALS 344
F+G +PY++ ++ I E LV DR++G KG+ + +++++ +
Sbjct: 9 FIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNT 68
Query: 345 AMRNLNGYEIGGRSLRVDNA 404
A+ LNG + G R L+V+ A
Sbjct: 69 AISGLNGADFGNRVLKVNRA 88
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
+EEQ +D +SVF+GN+ + +T E++++ F G ++ + D+ T K K + + E+
Sbjct: 52 EEEQKAIDA--KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEF 109
Query: 321 KDQETALSAM 350
D + +A+
Sbjct: 110 DDSSSIENAL 119
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
+ S+ + N+ Y+ T L+ F G + + D+ + + KG+GF + ++ A A+
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 351 RNLNGYEIGGRSLRV 395
+G + GR LRV
Sbjct: 78 DRTDGKLVDGRELRV 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
+ S+ + N+ Y+ T L+ F G + + D+ + + KG+GF + ++ A A+
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 351 RNLNGYEIGGRSLRV 395
+G + GR LRV
Sbjct: 78 DRTDGKLVDGRELRV 92
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPV-LSFKLVFDRETGKPKGYGFCEYKDQETA 338
+ + R++++G++P + TEE L +F+E G K V+ ++ + KGY F E+ + A
Sbjct: 64 NNAQRTLWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKD--ELKGYCFIEFITFDEA 121
Query: 339 LSAMRNLNGYEIGG 380
+ +LNG I G
Sbjct: 122 RQTLYDLNGNRIPG 135
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/99 (29%), Positives = 46/99 (46%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYG 308
K K +E S D ++V NIP+ E+ L +F G VLS ++V + G KG+G
Sbjct: 39 KPKTREPASFTDNR---IYVSNIPFSFREQDLAAMFFAYGRVLSVEIV-TNDRGS-KGFG 93
Query: 309 FCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRM 425
F E+ A L+ + GR + V A + ++
Sbjct: 94 FVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/99 (29%), Positives = 46/99 (46%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYG 308
K K +E S D ++V NIP+ E+ L +F G VLS ++V + G KG+G
Sbjct: 39 KPKTREPASFTDNR---IYVSNIPFSFREQDLAAMFFAYGRVLSVEIV-TNDRGS-KGFG 93
Query: 309 FCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRM 425
F E+ A L+ + GR + V A + ++
Sbjct: 94 FVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVG---PVLSFK----LVFDRETGKPK 299
KE + + +V+V N+P + T+E+ + S+ G P + ++ E GK K
Sbjct: 168 KEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLK 227
Query: 300 GYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 404
G G C Y +E+ A L+G + GR ++V+ A
Sbjct: 228 GDGRCCYIKKESVELACNILDGANLNGREVKVEEA 262
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKD-----------IFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
R V+VGN+P++ATE++L + +FS +GP+ S + +P G+ F +
Sbjct: 17 RQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWM-----AKRPPGFAFVTF 71
Query: 321 KDQETALSAMRNLNGYEIGGRSLRVD 398
K A A++ LNG +I +V+
Sbjct: 72 KRTVHAFDAVKYLNGKKICDLEAKVE 97
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
R+VF+G +P T E++ +FSE G VL + D++ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
R+VF+G +P T E++ +FSE G VL + D++ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
R+VF+G +P T E++ +FSE G VL + D++ G PKG
Sbjct: 105 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 147
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
R+VF+G +P T E++ +FSE G VL + D++ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +3
Query: 231 IFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 410
+F +VGPV+ +++F+ E G KG+GF ++ + A A NG I GR + V+ A
Sbjct: 1 MFEKVGPVVDVEIIFN-ERGS-KGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQ 58
Query: 411 EKSRMEMQALM 443
+ + LM
Sbjct: 59 RVHNKKAKPLM 69
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FVGN+P E E +LK++FS G + L KG+ F + A SA +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 360 NGYEIGGRSLRV 395
+G I GR +RV
Sbjct: 171 DGRIIHGRQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FVGN+P E E +LK++FS G + L KG+ F + A SA +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 360 NGYEIGGRSLRV 395
+G I GR +RV
Sbjct: 171 DGRIIHGRQVRV 182
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLS------FKLVFDRETGKPKGYGFCEYKDQETA 338
+VFV I A E + D+FS G + K+ DR TG+PKG + D A
Sbjct: 202 TVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFVDASAA 261
Query: 339 LSAMRNLNGYEIGGRS 386
A+ NG G S
Sbjct: 262 QQAITMYNGQPFPGGS 277
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/108 (24%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F + ++ A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAV 196
Query: 342 SAMRNL-NGYEIGGRS--LRVDNACTEKSR-MEMQALMQGPQVENPYG 473
A + + + + G S L V A T+K + ++ ++++ G +P G
Sbjct: 197 VATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGAGSPKG 244
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/108 (25%), Positives = 53/108 (49%)
Frame = +3
Query: 111 TIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETG 290
TI + D+S + S + + + +P+ ATE+ + + F+ G + ++ F TG
Sbjct: 43 TIKEADESMPTKISSGEPPRSQYIRLRGLPFNATEKDIHEFFA--GLTIE-RVKFVCTTG 99
Query: 291 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQ 434
+P G + E+K+ E A AM N + EI R + V +++ E +
Sbjct: 100 RPNGEAYVEFKNTEEAGKAMEN-DRKEISNRYIEVFTVEADEAEFEFR 146
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FV + T+E L+ IFS G + + ++V DR +G Y F E+ + ++ A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 360 NGYEIGGRSLRVD 398
+ I R + VD
Sbjct: 303 DNVLIDDRRIHVD 315
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKP-KGYGFCEYKDQETALSAMRN 356
+ + N+P++ +E L+++ S +G + L R+ K G+GF ++ ++ A
Sbjct: 97 LIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGREF 156
Query: 357 LNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISK 515
N ++ GRS+ D A +K E A + ++ VE ++ PE SK
Sbjct: 157 FNTNKVLGRSVAADWA-LDKDTYETNAHEEKQHLKKVV--KVEKDEKPEEKSK 206
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FV + T+E L+ IFS G + + ++V DR +G Y F E+ + ++ A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 360 NGYEIGGRSLRVD 398
+ I R + VD
Sbjct: 303 DNVLIDDRRIHVD 315
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FV + T+E L+ IFS G + + ++V DR +G Y F E+ + ++ A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 360 NGYEIGGRSLRVD 398
+ I R + VD
Sbjct: 234 DNVLIDDRRIHVD 246
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+++G + +E+ ++ F G + R+ G+GF E+ D+ A A+ +L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI--------RDVLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 360 NGYEIGGRSLRVD 398
NG E+GG + +D
Sbjct: 57 NGKELGGERVILD 69
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+++G + +E+ ++ F G + R+ G+GF E+ D+ A A+ +L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI--------RDVLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 360 NGYEIGGRSLRVD 398
NG E+GG + +D
Sbjct: 57 NGKELGGERVILD 69
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+++G + +E+ ++ F G + R+ G+GF E+ D+ A A+ +L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI--------RDVLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 360 NGYEIGGRSLRVD 398
NG E+GG + +D
Sbjct: 57 NGKELGGERVILD 69
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F + ++ A+
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAV 196
Query: 342 SA---MRNLNGYEIGG 380
A M + E+GG
Sbjct: 197 VATKEMHHSQTMELGG 212
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVG-PVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
++ + NIP +EEKLK++F+E G V +FK K C+ +D ETA+ A+
Sbjct: 377 TLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFF-----PKDHKMALCQLEDIETAIDALI 431
Query: 354 NLNGYEIGGRS-LRV 395
++ +++ + LRV
Sbjct: 432 AMHNHKLAENAHLRV 446
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVG-PVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
++ + NIP +EEKLK++F+E G V +FK K C+ +D ETA+ A+
Sbjct: 539 TLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFF-----PKDHKMALCQLEDIETAIDALI 593
Query: 354 NLNGYEIGGRS-LRV 395
++ +++ + LRV
Sbjct: 594 AMHNHKLAENAHLRV 608
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
V V NIP + + +L + + GPV ++ ++ K K F EY+++ +A + + +
Sbjct: 123 VHVRNIPPDLVDVELMQLCIQYGPVSNYMML------KGKSQAFVEYEEEASAAAFVSGM 176
Query: 360 NG--YEIGGRSL 389
+I GR+L
Sbjct: 177 TAVPIQIRGRTL 188
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/82 (20%), Positives = 43/82 (52%)
Frame = +3
Query: 159 MDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETA 338
+++ R+V+VGN+P ++ ++F+ + + + P Y + E+ Q +
Sbjct: 158 VEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASV 217
Query: 339 LSAMRNLNGYEIGGRSLRVDNA 404
+A++N +G+E R L++ ++
Sbjct: 218 CNALQN-DGFEFKERPLKIQHS 238
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/82 (20%), Positives = 43/82 (52%)
Frame = +3
Query: 159 MDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETA 338
+++ R+V+VGN+P ++ ++F+ + + + P Y + E+ Q +
Sbjct: 158 VEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASV 217
Query: 339 LSAMRNLNGYEIGGRSLRVDNA 404
+A++N +G+E R L++ ++
Sbjct: 218 CNALQN-DGFEFKERPLKIQHS 238
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D++ R++FVGN+P + E +++ +F E G V + T + + DQ
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Query: 342 SAMRNLNGYEIGGRSLRVDNACTEKSR 422
A GG +++ ++ SR
Sbjct: 225 KAEEQDRPIRAGGSRMKIGYGKSQVSR 251
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D++ R++FVGN+P + E +++ +F E G V + T + + DQ
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Query: 342 SAMRNLNGYEIGGRSLRVDNACTEKSR 422
A GG +++ ++ SR
Sbjct: 225 KAEEQDRPIRAGGSRMKIGYGKSQVSR 251
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D++ R++FVGN+P + E +++ +F E G V + T + + DQ
Sbjct: 142 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 201
Query: 342 SAMRNLNGYEIGGRSLRVDNACTEKSR 422
A GG +++ ++ SR
Sbjct: 202 KAEEQDRPIRAGGSRMKIGYGKSQVSR 228
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 35.1 bits (77), Expect = 0.064
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
D +V+V NIP+ TE+ L F GP+ + K+++ R + + C +
Sbjct: 196 DPYTTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAF 248
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
M V++G +P A++ ++ F G + + G+GF +++DQ A A+
Sbjct: 1 MVRVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV 52
Query: 351 RNLNGYEIGG 380
+LNG E+ G
Sbjct: 53 HDLNGKELCG 62
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFD 278
R+++VGN+ TE+ + +F+++G V K++FD
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVG 248
R +FVG +P++ TE LKD F E G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++++ N+P + TE+ L+ ++ G V+S +++ + + +G GF +E +
Sbjct: 163 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPD-NQSRGVGFARMDSKEKCEVIISA 221
Query: 357 LNGYEIG-----GRSLRVDNACT-EKSR-----MEMQALMQGPQVENPY 470
LNG G +L + A T KS+ EM MQ PQV Y
Sbjct: 222 LNGGRFDTMSKEGPALLIKQADTGRKSKHSMNNPEMLQRMQYPQVYQSY 270
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++++ N+P + TE+ L+ ++ G V+S +++ + + +G GF +E +
Sbjct: 189 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPD-NQSRGVGFARMDSKEKCEVIISA 247
Query: 357 LNG 365
LNG
Sbjct: 248 LNG 250
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/47 (27%), Positives = 30/47 (63%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPV 254
+FVGN+P E E +LK++FS G +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDI 142
>U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical
protein T27F7.2c protein.
Length = 331
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 447 LALELAFPFAI--SLYKHYLLLTNDHQFRIH*DFSWHSKPFPGLYIHKTHN 301
LAL + P + S HYL++ N+ FR+ S KPFP L + TH+
Sbjct: 204 LALSMRVPCSHNPSGISHYLIIRNEQGFRL--KLSATKKPFPTLQMMLTHH 252
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 447 LALELAFPFAI--SLYKHYLLLTNDHQFRIH*DFSWHSKPFPGLYIHKTHN 301
LAL + P + S HYL++ N+ FR+ S KPFP L + TH+
Sbjct: 573 LALSMRVPCSHNPSGISHYLIIRNEQGFRL--KLSATKKPFPTLQMMLTHH 621
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 447 LALELAFPFAI--SLYKHYLLLTNDHQFRIH*DFSWHSKPFPGLYIHKTHN 301
LAL + P + S HYL++ N+ FR+ S KPFP L + TH+
Sbjct: 583 LALSMRVPCSHNPSGISHYLIIRNEQGFRL--KLSATKKPFPTLQMMLTHH 631
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FVGN+P KLK +F V +V K Y F ++ + + L
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFVHIEEDDVD-PIITRL 55
Query: 360 NGYEIGGRSLRVDNACTEKSR 422
GY I G+ + + + T K R
Sbjct: 56 TGYTIDGKVVNIKKS-TSKLR 75
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FVGN+P KLK +F V +V K Y F ++ + + L
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFVHIEEDDVD-PIITRL 55
Query: 360 NGYEIGGRSLRVDNACTEKSR 422
GY I G+ + + + T K R
Sbjct: 56 TGYTIDGKVVNIKKS-TSKLR 75
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +3
Query: 666 IVDPATAVTMLHPSNPVPPNLTTGVIXQPKRXLIYHPXPXPAQPXIXXXPGPXTXPVQXF 845
IVDPAT+ L ++ P+ TT +P + P P P P PV
Sbjct: 549 IVDPATSEEPLSTASTALPDETTDAPEEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDG 608
Query: 846 PS 851
P+
Sbjct: 609 PN 610
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 195 IPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEI 374
+P+EATE++L+D F G + S ++ R G+ G + ++E +A++ + +
Sbjct: 12 LPWEATEQELRDFFGNNG-IESLEI--PRRNGRTSGDAKVVFTNEEDYNNALKK-DREHL 67
Query: 375 GGRSLRV 395
G R + V
Sbjct: 68 GSRYIEV 74
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 195 IPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEI 374
+P+EATE++L+D F G + S ++ R G+ G + ++E +A++ + +
Sbjct: 12 LPWEATEQELRDFFGNNG-IESLEI--PRRNGRTSGDAKVVFTNEEDYNNALKK-DREHL 67
Query: 375 GGRSLRV 395
G R + V
Sbjct: 68 GSRYIEV 74
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/119 (22%), Positives = 49/119 (41%)
Frame = +3
Query: 291 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY 470
+PK +GF + D ++A + +R+ + + S++ K E+ Q E
Sbjct: 893 RPKAFGFVRFVDSDSAAAMVRD---FIVNDPSIKYQKHEKRKKEAEL-VRRQEENEEEEI 948
Query: 471 GDPVEPEKAPEAISKAVATLPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQ 647
D + P + + V P E L ++L + N + R +L + QL LLQ
Sbjct: 949 PDILSPGEIDDLEPPVV---PQEFPPRLRPFVELYMTKNLHSPRRLLSHHAQLVVLLLQ 1004
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 156 IMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKL 269
I D+ +V+V N+P +EEKL + S G V+ ++
Sbjct: 813 IYDREAATVYVDNLPEGCSEEKLLRLCSCYGTVVEVRI 850
>Z49967-9|CAA90256.1| 328|Caenorhabditis elegans Hypothetical
protein F54C9.11 protein.
Length = 328
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = +3
Query: 135 KEKEEQSIMDKSMRSVFVGNIPYEAT-----EEKLKDIFSEVGPVLSFKLVFDRETGKP 296
K+K+ ++ DK S Y T E+K + E+ P+L + F RE G P
Sbjct: 168 KQKDAANVSDKKKASSLPSTSTYTLTPSEDREQKEANAVEEIDPILFSEFEFWREAGHP 226
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 621 PQLAYALLQAQVIMRIVD-PATAVTML-HPSNPVPPNLTTGVIXQP 752
PQ A A LQ + IVD AT T++ P P+PP TGV +P
Sbjct: 91 PQQAQASLQKPIQSGIVDADATVKTVVPRPPTPIPP---TGVKPEP 133
>AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical
protein W02G9.3 protein.
Length = 345
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +3
Query: 423 MEMQALMQGPQVENPYGDPVEPEKAPEAISKAVATLPPEQM----FELMKQMKLCIQNNP 590
+ ++A PQ G+P E E + E I+ A+ +Q +K+ + CIQ P
Sbjct: 134 ISLKAPEAAPQGSEAPGNPAEAEDSDEDIADALKKACDDQRQPKPGNFVKKERRCIQ-RP 192
Query: 591 NEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPSNPVPPNL 728
+N + + + A L A+ ++ + A L PV L
Sbjct: 193 TGVKNCIFVSVKNANIQLLAEKMVELTQKAPRCRFLQRVYPVEHTL 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,284,058
Number of Sequences: 27780
Number of extensions: 380030
Number of successful extensions: 1477
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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