Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E03
(853 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07) 96 4e-20
SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10) 40 0.003
SB_13078| Best HMM Match : RVP (HMM E-Value=0.039) 31 0.90
SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17) 31 1.6
SB_28788| Best HMM Match : RVP (HMM E-Value=0.028) 31 1.6
SB_23218| Best HMM Match : zf-CCHC (HMM E-Value=0.00066) 31 1.6
SB_12598| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 31 1.6
SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17) 31 1.6
SB_860| Best HMM Match : RVP (HMM E-Value=0.018) 31 1.6
SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22) 31 1.6
SB_46473| Best HMM Match : RVP (HMM E-Value=0.029) 31 1.6
SB_29974| Best HMM Match : RVT_1 (HMM E-Value=3e-17) 31 1.6
SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 31 1.6
SB_8937| Best HMM Match : RVP (HMM E-Value=0.029) 31 1.6
SB_4291| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_59190| Best HMM Match : rve (HMM E-Value=6e-18) 30 2.1
SB_42289| Best HMM Match : RVT_1 (HMM E-Value=5.2e-17) 30 2.1
SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_16159| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_25676| Best HMM Match : TSP_1 (HMM E-Value=0.0055) 29 4.8
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 29 6.3
SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14) 29 6.3
SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2) 29 6.3
SB_20103| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07)
Length = 203
Score = 95.9 bits (228), Expect = 4e-20
Identities = 56/139 (40%), Positives = 81/139 (58%)
Frame = +1
Query: 10 FRGLDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLR 189
+ G ++V P F FG+ N + +FLKKFP GKVPAFE+ AN R
Sbjct: 24 YSGTKIEV-PAFTFGKDNHTAEFLKKFPLGKVPAFETK---------------TANACTR 67
Query: 190 GGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGH 369
L T + +++D ELLPA+ WVFP G+MQ++KQ+ ++A D+ + +L+
Sbjct: 68 AMPLLTT-----YVNFADQELLPAAATWVFPTYGMMQYHKQSTDKAMEDVKKYMTMLNDV 122
Query: 370 LLTRTFLVTERITLADVIV 426
LL +TFLV ER+TLAD+ V
Sbjct: 123 LLMKTFLVGERVTLADIAV 141
>SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10)
Length = 260
Score = 39.5 bits (88), Expect = 0.003
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Frame = +1
Query: 91 PAGKVPAFESADGKVLLTESNAIAYYVA--NESLRGGDLATQARVWQWASWSDSELLPAS 264
P +P E+ +G SN I Y+A ++ L G DL + +V QW + + A
Sbjct: 45 PFNTLPLLETKEGTFF--SSNTIIRYLAASSDKLYGSDLFQRGQVDQWLDITTCDFEAAV 102
Query: 265 CAWVFPYLGIMQFNKQNVERAK--SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYT 438
A G ++VE AK +D+ L ++ HL R FLV + +T+AD V +
Sbjct: 103 AAVAIAKEG------RDVEGAKIVADINKFLGFVEKHLAGRKFLVGDSVTIADFSVATSI 156
Query: 439 AACFPARARPER 474
A + +R
Sbjct: 157 AVILTSLGDEDR 168
>SB_13078| Best HMM Match : RVP (HMM E-Value=0.039)
Length = 251
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S ++ + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 165 SREQIKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17)
Length = 635
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 113 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_28788| Best HMM Match : RVP (HMM E-Value=0.028)
Length = 278
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 165 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_23218| Best HMM Match : zf-CCHC (HMM E-Value=0.00066)
Length = 557
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 386 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 434
>SB_12598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 165 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 1432
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 281 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 329
>SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17)
Length = 609
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 303 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 351
>SB_860| Best HMM Match : RVP (HMM E-Value=0.018)
Length = 260
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 147 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 195
>SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22)
Length = 800
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 113 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_46473| Best HMM Match : RVP (HMM E-Value=0.029)
Length = 304
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 165 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_29974| Best HMM Match : RVT_1 (HMM E-Value=3e-17)
Length = 890
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 113 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 649
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 337 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 385
>SB_8937| Best HMM Match : RVP (HMM E-Value=0.029)
Length = 303
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 165 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_4291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 302 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
S + + +LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 61 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 109
>SB_59190| Best HMM Match : rve (HMM E-Value=6e-18)
Length = 660
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 329 SLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
+LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 174 TLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_42289| Best HMM Match : RVT_1 (HMM E-Value=5.2e-17)
Length = 429
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 329 SLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 448
+LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 28 TLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 67
>SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 274 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLAD 417
++P + Q NV+R +DL + K+ L R F V E T AD
Sbjct: 73 IYPNIMDEQIRTANVQRGSADLQTSAKITLKKFLPRCFSVIESTTSAD 120
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 465 SSTCWKACSSVTEDNDIGKCDSLGNKEGAC 376
SS CWK+CS D +C L KEG C
Sbjct: 463 SSQCWKSCSGCCVDKKPVQC-PLWAKEGEC 491
>SB_16159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 196 DLATQARVWQWASWSDSELLPASCA 270
DL T A+V+ WA W ++ SCA
Sbjct: 78 DLTTTAQVYSWAMWEPWQMRNLSCA 102
>SB_25676| Best HMM Match : TSP_1 (HMM E-Value=0.0055)
Length = 141
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 196 DLATQARVWQWASWSDSELLPASCA 270
DL T A+V+ WA W ++ SCA
Sbjct: 78 DLTTTAQVYSWAMWEPWQMRNLSCA 102
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 292 IMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYTAACFPARARPE 471
+M + K +VE K DL L+ + LLTR FL+ + + D+I+ RP
Sbjct: 194 VMSWIKHDVESRKKDLANLLEHIRFPLLTRKFLI-DTVAKEDLIM----------NERPC 242
Query: 472 RPFVADKRS-ALVPDRR 519
R FV + L+P+RR
Sbjct: 243 REFVLEAIDYHLIPERR 259
>SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14)
Length = 505
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 28 KVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESL 186
K+ P V GE N + +KK +P GK + + + I + N+SL
Sbjct: 123 KLKPKMVAGEDNGFVNAIKKVSLEDIPEGNGPSGKAIREKRSIIVNDIENDSL 175
>SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2)
Length = 252
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 519 ATVRNQR*TFISDERTLGSSTCWKACSSVTEDNDIGKCDS 400
AT ++R +S E T SST + SS ++ND+ + D+
Sbjct: 14 ATTEDERLNEVSQEETTKSSTKLNSDSSAKDENDVNEGDT 53
>SB_20103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 621 SVXPANSWYFLGSYVGGAAQSVSEP 547
S+ P++ YFLG+Y GAA S P
Sbjct: 586 SMNPSHKLYFLGNYTAGAAVISSTP 610
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,071,606
Number of Sequences: 59808
Number of extensions: 508010
Number of successful extensions: 1437
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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