Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E03
(853 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative / ... 98 7e-21
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ... 95 4e-20
At1g02930.1 68414.m00260 glutathione S-transferase, putative sim... 48 8e-06
At1g02920.1 68414.m00259 glutathione S-transferase, putative sim... 44 1e-04
At2g02930.1 68415.m00241 glutathione S-transferase, putative 42 5e-04
At1g02950.2 68414.m00263 glutathione S-transferase, putative sim... 41 0.001
At1g02950.1 68414.m00262 glutathione S-transferase, putative sim... 41 0.001
At1g02940.1 68414.m00261 glutathione S-transferase, putative sim... 41 0.001
At4g02520.1 68417.m00345 glutathione S-transferase, putative 39 0.004
At2g30860.1 68415.m03761 glutathione S-transferase, putative ide... 39 0.005
At2g02380.1 68415.m00176 glutathione S-transferase, putative sim... 33 0.18
At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do... 32 0.56
At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1... 32 0.56
At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1... 32 0.56
At1g16840.2 68414.m02028 expressed protein 32 0.56
At2g06200.1 68415.m00682 expressed protein 30 1.7
At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta id... 30 2.2
At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N domain-... 29 3.0
At3g49210.1 68416.m05378 expressed protein 29 3.9
At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1... 29 5.2
At4g38430.1 68417.m05431 expressed protein contains Pfam profile... 28 6.9
At2g18110.1 68415.m02105 elongation factor 1-beta, putative / EF... 28 6.9
At5g07120.1 68418.m00812 phox (PX) domain-containing protein sim... 28 9.1
At1g27850.1 68414.m03413 expressed protein similar to En/Spm-lik... 28 9.1
>At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative Similar to elongation factor
1-gamma (gb|EF1G_XENLA). ESTs
gb|T20564,gb|T45940,gb|T04527 come from this gene
Length = 414
Score = 97.9 bits (233), Expect = 7e-21
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Frame = +1
Query: 16 GLDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA----NES 183
G+ + V +F G TNK+ FLK P GKVP E+ +G V ESNAIA YV+ + S
Sbjct: 25 GVQIDVPSDFQMGVTNKTPAFLKMNPIGKVPVLETPEGSVF--ESNAIARYVSRLNGDNS 82
Query: 184 LRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 363
L G L A++ QW +S E+ + W P +G M ++ E A S L AL L+
Sbjct: 83 LNGSSLIEYAQIEQWIDFSSLEIYASILRWFGPRMGFMPYSAPAEEGAISTLKRALDALN 142
Query: 364 GHLLTRTFLVTERITLADVI 423
HL + T+LV ITLAD+I
Sbjct: 143 THLTSNTYLVGHSITLADII 162
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 449 FQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGCTEQ 625
F V+ S +V+R+F TV +QP + V+G + A P KK + A E+
Sbjct: 171 FATVMTKKFTSEFPHVERYFWTVVNQPNFTKVLGDVKQTEAVPPIASKKAAQPAKPKEE 229
>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative similar to elongation factor 1B
gamma GI:3868758 from [Oryza sativa]
Length = 413
Score = 95.5 bits (227), Expect = 4e-20
Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Frame = +1
Query: 10 FRGLDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE--- 180
+ G+ ++ + +F G TNKS +FLK P GKVP E+ +G + ESNAIA YV+ +
Sbjct: 23 YAGVKIEESADFQMGVTNKSPEFLKMNPIGKVPVLETPEGPIF--ESNAIARYVSRKNGD 80
Query: 181 -SLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKV 357
SL G L A + QW +S E+ W P +G F+ E A S L L+
Sbjct: 81 NSLNGSSLIEYAHIEQWIDFSSLEIDANMLKWFAPRMGYAPFSAPAEEAAISALKRGLEA 140
Query: 358 LDGHLLTRTFLVTERITLADVI 423
L+ HL + TFLV +TLAD++
Sbjct: 141 LNTHLASNTFLVGHSVTLADIV 162
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 449 FQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGCTEQ 625
F V+ S+ +V+R+F T+ +QP+ V+G A P KK + A E+
Sbjct: 171 FATVMTKKFTSAFPHVERYFWTMVNQPEFKKVLGDAKQTEAVPPVPTKKAPQPAKPKEE 229
>At1g02930.1 68414.m00260 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 208
Score = 48.0 bits (109), Expect = 8e-06
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Frame = +1
Query: 61 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE-SLRGGDLAT----QARVWQ 225
+K E F+ + P GKVPAFE D K+ ES AI Y+A+E S +G +L + A +
Sbjct: 41 HKKEPFILRNPFGKVPAFEDGDFKIF--ESRAITQYIAHEFSDKGNNLLSTGKDMAIIAM 98
Query: 226 WASWSDSELLP--ASCAW--VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLV 393
E P + W V L M +K VE ++ L L V + L +L
Sbjct: 99 GIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLA 158
Query: 394 TERITLAD---VIVFSYTAACFPARARPERPFVADKRSALVPD--RRPPAASV 537
++ TL D + V Y + ERP V SA V D RP A V
Sbjct: 159 SDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHV----SAWVADITSRPSAQKV 207
>At1g02920.1 68414.m00259 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]; supported by cDNA GI:443697.
Length = 209
Score = 44.0 bits (99), Expect = 1e-04
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Frame = +1
Query: 61 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN-ESLRGGDLATQ-----ARVW 222
+K E F+ + P GKVPAFE DG L ES AI Y+A+ S +G L + A +
Sbjct: 41 HKKEPFIFRNPFGKVPAFE--DGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIA 98
Query: 223 QWASWSDSELLP--ASCAW--VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 390
E P + W V L M +K VE ++ L L V + L +L
Sbjct: 99 MGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYL 158
Query: 391 VTERITLAD---VIVFSYTAACFPARARPERPFVADKRSALVPD--RRPPAASV 537
+++ TL D + V Y + ERP V SA V D RP A V
Sbjct: 159 ASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHV----SAWVADITSRPSAKKV 208
>At2g02930.1 68415.m00241 glutathione S-transferase, putative
Length = 212
Score = 41.9 bits (94), Expect = 5e-04
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Frame = +1
Query: 61 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE-SLRGGDL--ATQARVWQWA 231
+K E FL + P G+VPAFE DG + L ES AI Y+A+ +G +L A + Q+A
Sbjct: 41 HKKEPFLSRNPFGQVPAFE--DGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYA 98
Query: 232 SWS--------DSELLPASCAW--VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTR 381
S + + + AW VF + + ++ V ++ L L V + L
Sbjct: 99 IMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEF 158
Query: 382 TFLVTERITLAD---VIVFSYTAACFPARARPERPFV 483
+L E TL D + V Y + ERP V
Sbjct: 159 KYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRV 195
>At1g02950.2 68414.m00263 glutathione S-transferase, putative
similar to glutathione-S-transferase GI:169887 from
[Silene vulgaris]
Length = 245
Score = 41.1 bits (92), Expect = 0.001
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Frame = +1
Query: 61 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN-ESLRGGDL------ATQARV 219
+K+E FL P G+VP FE DG V L ES AI Y+A S RG L T A +
Sbjct: 64 HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIAYVHSSRGTQLLNLRSHETMATL 121
Query: 220 WQWASWSDSELLP--ASCAW---VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRT 384
W + P + W + P G ++ ++ V+ ++ L L + + L
Sbjct: 122 TMWMEIEAHQFDPPASKLTWEQVIKPIYG-LETDQTIVKENEAILEKVLNIYEKRLEESR 180
Query: 385 FLVTERITLADV 420
FL TL D+
Sbjct: 181 FLACNSFTLVDL 192
>At1g02950.1 68414.m00262 glutathione S-transferase, putative
similar to glutathione-S-transferase GI:169887 from
[Silene vulgaris]
Length = 243
Score = 41.1 bits (92), Expect = 0.001
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Frame = +1
Query: 61 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN-ESLRGGDL------ATQARV 219
+K+E FL P G+VP FE DG V L ES AI Y+A S RG L T A +
Sbjct: 62 HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIAYVHSSRGTQLLNLRSHETMATL 119
Query: 220 WQWASWSDSELLP--ASCAW---VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRT 384
W + P + W + P G ++ ++ V+ ++ L L + + L
Sbjct: 120 TMWMEIEAHQFDPPASKLTWEQVIKPIYG-LETDQTIVKENEAILEKVLNIYEKRLEESR 178
Query: 385 FLVTERITLADV 420
FL TL D+
Sbjct: 179 FLACNSFTLVDL 190
>At1g02940.1 68414.m00261 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 256
Score = 41.1 bits (92), Expect = 0.001
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Frame = +1
Query: 31 VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN-ESLRGGDLAT 207
+ N + G+ K FL P G+VP F DG + LTES AI+ Y+A RG L
Sbjct: 67 ITVNLIAGD-QKKPSFLAINPFGQVPVF--LDGGLKLTESRAISEYIATVHKSRGTQLLN 123
Query: 208 --------QARVWQWASWSDSELLPASCAW---VFPYLGIMQFNKQNVERAKSDLLAALK 354
R+W + + L ++ W + P G ++ + + V ++ L L
Sbjct: 124 YKSYKTMGTQRMWMAIESFEFDPLTSTLTWEQSIKPMYG-LKTDYKVVNETEAKLEKVLD 182
Query: 355 VLDGHLLTRTFLVTERITLADV 420
+ + L +FL + T+AD+
Sbjct: 183 IYEERLKNSSFLASNSFTMADL 204
>At4g02520.1 68417.m00345 glutathione S-transferase, putative
Length = 212
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 61 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN 177
+K E FL + P G+VPAFE DG + L ES AI Y+A+
Sbjct: 41 HKKEPFLSRNPFGQVPAFE--DGDLKLFESRAITQYIAH 77
>At2g30860.1 68415.m03761 glutathione S-transferase, putative
identical to GB:Y12295
Length = 215
Score = 38.7 bits (86), Expect = 0.005
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Frame = +1
Query: 1 TGIFRGLDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE 180
T I +G+ + P + +K +L P G VPA D K+ ES A+ YVA +
Sbjct: 19 TLIEKGVAFETIPVDLMKGEHKQPAYLALQPFGTVPAVVDGDYKIF--ESRAVMRYVAEK 76
Query: 181 ------SLRGGDLATQARVWQWASWSDSELLPA--SCAWVFPYLGIMQF--NKQNVERAK 330
L G + + +V QW + P + + +M F +++ ++ ++
Sbjct: 77 YRSQGPDLLGKTVEDRGQVEQWLDVEATTYHPPLLNLTLHIMFASVMGFPSDEKLIKESE 136
Query: 331 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYT 438
L L V + HL +L + ++LAD+ +T
Sbjct: 137 EKLAGVLDVYEAHLSKSKYLAGDFVSLADLAHLPFT 172
>At2g02380.1 68415.m00176 glutathione S-transferase, putative
similar to gi:167970 gb:AAA72320 gb:AY052332
Length = 223
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 13 RGLDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 171
+GLD + P N + G+ + S DF K P G VPA DG V++ +S AI Y+
Sbjct: 33 KGLDYEYIPVNLLKGDQSDS-DFKKINPMGTVPAL--VDGDVVINDSFAIIMYL 83
>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
domain-containing protein contains Pfam domain PF00043:
Glutathione S-transferase, C-terminal domain
Length = 399
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 304 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFS 432
+++ + A ++L + L ++ HL + +L ER+TLADV +F+
Sbjct: 261 SQEAYDGAVNELFSTLDEIEDHLGSNRYLCGERLTLADVCLFT 303
>At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 191
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 13 RGLDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 171
+GLD + P N + G+ S DF K P G VPA DG V++ +S AI Y+
Sbjct: 30 KGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGDVVINDSFAIIMYL 80
>At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 221
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 13 RGLDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 171
+GLD + P N + G+ S DF K P G VPA DG V++ +S AI Y+
Sbjct: 30 KGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGDVVINDSFAIIMYL 80
>At1g16840.2 68414.m02028 expressed protein
Length = 161
Score = 31.9 bits (69), Expect = 0.56
Identities = 26/80 (32%), Positives = 34/80 (42%)
Frame = +2
Query: 125 MERCF*LKAMPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTANYCLLPALGSSLTLVSCNS 304
+ R F +A P LP V W+P P SGS HG+ L+ L + LT S
Sbjct: 67 VHRIFVRRAQPDW--LPF-VPGASYWVPPPGSGSQSHGIAQ---LVVKLANPLTHEESLS 120
Query: 305 TNRMLNVQSLTYWPP*KYWT 364
TN S Y+ YW+
Sbjct: 121 TNSSHGWPSSDYFLKGSYWS 140
>At2g06200.1 68415.m00682 expressed protein
Length = 244
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 510 RNQR*TFISDERTLGSSTCWKACS-SVTEDNDIGKCDSLGNKE 385
R +R ++ D ++ S K+CS S EDND G C + N+E
Sbjct: 139 RRRRSGYMDDFFSIEPSGSIKSCSGSAMEDNDDGSCRGINNEE 181
>At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta
identical to SP|P48006 Elongation factor 1-beta
(EF-1-beta) {Arabidopsis thaliana}
Length = 231
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 343 AALKVLDGHLLTRTFLVTERITLADVIVFSYTA 441
A LK LD HLLTR+++ + + D+ VF+ A
Sbjct: 11 AGLKKLDEHLLTRSYITGYQASKDDITVFAALA 43
>At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N
domain-containing protein-related contains weak hit to
Pfam F00627: UBA/TS-N domain; supported by tandem
duplication of ubiquitin-associated (UBA)/TS-N domain
protein (GI:2924790) (TIGR_Ath1:At2g33010) [Arabidopsis
thaliana]
Length = 508
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 287 LVSCNSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRES 406
L++ + N N +S + WPP K W D H + E+
Sbjct: 195 LMASSQVNTQENQESTSVWPPMKTWVDRICHETKVSREEA 234
>At3g49210.1 68416.m05378 expressed protein
Length = 518
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 196 DLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLL 375
D+ + +W +W + P S L ++ K+ ++R K+ L AAL + G +
Sbjct: 352 DMMAKGSTCRWGNWIGYIVFPFSIGLRDDPLQHLRRAKRIIDRKKNSLEAALTFVAGKFI 411
Query: 376 TRTF 387
+TF
Sbjct: 412 LKTF 415
>At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 228
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +1
Query: 13 RGLDVKVAP-NFVFGETNKS------EDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 171
+GLD + P N + G+ S +DF K P G VPA DG V++ +S AI Y+
Sbjct: 30 KGLDYEYIPVNLLKGDQFDSVYRFDLQDFKKINPMGTVPAL--VDGDVVINDSFAIIMYL 87
>At4g38430.1 68417.m05431 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 548
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 553 AHALCGSSYIRP*KVPGVSWXHRTRRRAKKIRSVKRKXTXEEG 681
A ++ S + P P +S R+ RRA + SVKR T E+G
Sbjct: 478 AFSVQSSPHGSPFATPALSVASRSPRRAPPLYSVKRNGTREKG 520
>At2g18110.1 68415.m02105 elongation factor 1-beta, putative /
EF-1-beta, putative nearly identical to eEF-1beta
[Arabidopsis thaliana] GI:398606
Length = 231
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 343 AALKVLDGHLLTRTFLVTERITLADVIVFS 432
+ LK LD HLLTR+++ + + D+ VF+
Sbjct: 11 SGLKKLDEHLLTRSYITGYQASKDDITVFT 40
>At5g07120.1 68418.m00812 phox (PX) domain-containing protein
similar to SP|O60749 Sorting nexin 2 {Homo sapiens};
contains Pfam profile PF00787: PX domain
Length = 572
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 403 ITLADVIVFSYTAACFPARARPERPFVAD---KRSALVPDRRPPAASVGRRRLAHALCGS 573
+TLAD + SY C P RP++ V ++ V RR RR +AH + +
Sbjct: 195 VTLADRLAESYRGFCIP--PRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRN 252
Query: 574 S 576
S
Sbjct: 253 S 253
>At1g27850.1 68414.m03413 expressed protein similar to En/Spm-like
transposon protein GB:AAB95292 GI:2088658 from
[Arabidopsis thaliana]
Length = 1148
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 554 ASRRRPTLAAGGRRSGTNAERLSATNGR 471
+S R P+ A GRRSGT R+S T G+
Sbjct: 171 SSARHPS-PASGRRSGTPVRRISPTPGK 197
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,687,323
Number of Sequences: 28952
Number of extensions: 345883
Number of successful extensions: 1037
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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