Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E02
(845 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 249 8e-65
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 228 2e-58
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 218 1e-55
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 194 2e-48
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 192 7e-48
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 190 3e-47
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 179 9e-44
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 161 2e-38
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 132 1e-29
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 122 9e-27
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 121 2e-26
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 118 2e-25
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 118 2e-25
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 115 2e-24
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 114 3e-24
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 113 4e-24
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 111 2e-23
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 106 6e-22
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 105 2e-21
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 104 3e-21
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 103 4e-21
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 99 2e-19
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 97 6e-19
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 93 6e-18
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 93 8e-18
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 93 1e-17
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 89 2e-16
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 87 7e-16
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 87 7e-16
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 81 3e-14
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 80 8e-14
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 79 1e-13
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 79 1e-13
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 79 1e-13
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 78 3e-13
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 75 3e-12
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 74 4e-12
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 71 3e-11
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 71 4e-11
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 68 3e-10
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 68 3e-10
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 67 5e-10
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 67 6e-10
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 67 6e-10
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 65 2e-09
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 65 2e-09
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 65 2e-09
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 64 4e-09
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 64 4e-09
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 62 1e-08
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 61 3e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 58 2e-07
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 57 5e-07
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 57 6e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 8e-07
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 56 1e-06
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 56 1e-06
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 56 1e-06
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 55 2e-06
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 54 3e-06
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 54 3e-06
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 54 6e-06
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 53 1e-05
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 53 1e-05
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 52 1e-05
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 52 2e-05
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 51 4e-05
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 50 6e-05
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 50 1e-04
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 49 1e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 49 2e-04
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 48 3e-04
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 48 4e-04
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 46 0.002
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 46 0.002
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 45 0.003
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 45 0.003
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 44 0.006
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 43 0.008
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 43 0.008
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 42 0.015
UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces cere... 39 0.14
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 38 0.24
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.55
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 35 3.0
UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S riboso... 34 3.9
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 34 3.9
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 34 5.2
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 9.0
UniRef50_Q8WRW5 Cluster: Odorant binding protein ASP1; n=2; Apis... 33 9.0
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.0
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 249 bits (609), Expect = 8e-65
Identities = 115/124 (92%), Positives = 120/124 (96%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++
Sbjct: 104 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIV 163
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
PVRRGYWGNKIGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCY
Sbjct: 164 PVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCY 223
Query: 685 TSAR 696
TSAR
Sbjct: 224 TSAR 227
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASL 102
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 228 bits (557), Expect = 2e-58
Identities = 110/132 (83%), Positives = 118/132 (89%)
Frame = +1
Query: 301 SSSARPXNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 480
S S+R DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AI
Sbjct: 41 SRSSR-RQDEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAI 99
Query: 481 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLX 660
ILAKLS++P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL
Sbjct: 100 ILAKLSIVPLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLM 159
Query: 661 MAGVQDCYTSAR 696
MAG+ DCYTSAR
Sbjct: 160 MAGIDDCYTSAR 171
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 218 bits (533), Expect = 1e-55
Identities = 92/125 (73%), Positives = 114/125 (91%)
Frame = +1
Query: 322 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 501
NDEV+K++PVQKQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS+
Sbjct: 76 NDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSI 135
Query: 502 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDC 681
+P+RRGYWG +G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ L +AG++DC
Sbjct: 136 MPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDC 195
Query: 682 YTSAR 696
YT +R
Sbjct: 196 YTQSR 200
Score = 75.4 bits (177), Expect = 2e-12
Identities = 30/45 (66%), Positives = 41/45 (91%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL 308
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL 72
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 194 bits (473), Expect = 2e-48
Identities = 86/123 (69%), Positives = 105/123 (85%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+
Sbjct: 78 DEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVI 137
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
P+RRGYWG +G+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLL +AGV+D Y
Sbjct: 138 PIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVY 197
Query: 685 TSA 693
T +
Sbjct: 198 TQS 200
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +3
Query: 180 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL 308
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL 73
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 192 bits (469), Expect = 7e-48
Identities = 89/111 (80%), Positives = 97/111 (87%)
Frame = +1
Query: 376 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 555
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 556 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSARXQLA 708
P KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSAR A
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTA 171
Score = 33.5 bits (73), Expect = 6.8
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 180 DQKEWVPVTKLGRLVREGKI 239
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 190 bits (464), Expect = 3e-47
Identities = 87/124 (70%), Positives = 105/124 (84%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEV+KI PVQKQT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++
Sbjct: 94 DEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIV 153
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
PVRRGYWG+K+G+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D Y
Sbjct: 154 PVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVY 213
Query: 685 TSAR 696
T +R
Sbjct: 214 TCSR 217
Score = 66.9 bits (156), Expect = 6e-10
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +3
Query: 177 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGEL 92
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 179 bits (435), Expect = 9e-44
Identities = 83/96 (86%), Positives = 87/96 (90%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++
Sbjct: 44 DEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIV 103
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 612
PV RGYWGNKIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 104 PVCRGYWGNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +3
Query: 195 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASL 42
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 161 bits (391), Expect = 2e-38
Identities = 73/121 (60%), Positives = 90/121 (74%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++
Sbjct: 65 EEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIR 124
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
PVR G W GKPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ +AG++D Y
Sbjct: 125 PVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLY 184
Query: 685 T 687
T
Sbjct: 185 T 185
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSI 63
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 132 bits (318), Expect = 1e-29
Identities = 74/124 (59%), Positives = 87/124 (70%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+ IIL KL ++
Sbjct: 92 DEVLKSLPEQKGTRVGQY--YKA----GDYNGHVITGLD---EVANTIQRVIILTKLPIV 142
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
PV RGY G+K KPHTV CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+
Sbjct: 143 PVWRGYCGSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCH 201
Query: 685 TSAR 696
TSAR
Sbjct: 202 TSAR 205
Score = 50.0 bits (114), Expect = 7e-05
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +3
Query: 198 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAAL 90
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 122 bits (295), Expect = 9e-27
Identities = 68/121 (56%), Positives = 81/121 (66%)
Frame = +1
Query: 334 LKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR 513
++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGAIIL + S+
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAW 66
Query: 514 RGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSA 693
G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL MA + D + A
Sbjct: 67 GGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLA 126
Query: 694 R 696
R
Sbjct: 127 R 127
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 121 bits (292), Expect = 2e-26
Identities = 65/111 (58%), Positives = 80/111 (72%)
Frame = +1
Query: 346 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 525
P+ KQT Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 526 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
G ++ +PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D
Sbjct: 148 GKRL-EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDD 196
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +3
Query: 183 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDF 302
+ +W+P+TKLG LV+E KI LE IY FSL + + F
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTF 90
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 118 bits (284), Expect = 2e-25
Identities = 59/124 (47%), Positives = 82/124 (66%), Gaps = 2/124 (1%)
Frame = +1
Query: 322 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 501
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 502 LPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQ 675
+ ++RG W + +PH+VP V GK GSV VRLIP PRG G+V V KK+L +AGVQ
Sbjct: 122 IEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQ 181
Query: 676 DCYT 687
D ++
Sbjct: 182 DVWS 185
Score = 41.9 bits (94), Expect = 0.019
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 189 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL 308
EW P TKLG +V+EG+I + I+ IKE EIID L
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL 54
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 118 bits (283), Expect = 2e-25
Identities = 57/123 (46%), Positives = 83/123 (67%), Gaps = 2/123 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++
Sbjct: 59 EQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLI 118
Query: 505 PVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
VR G W G PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D
Sbjct: 119 KVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKD 178
Query: 679 CYT 687
+T
Sbjct: 179 AWT 181
Score = 37.9 bits (84), Expect = 0.32
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL 308
K + + W P T++GR+V+EG I + I LP+ E EI+D L
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL 54
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 115 bits (276), Expect = 2e-24
Identities = 56/127 (44%), Positives = 87/127 (68%), Gaps = 2/127 (1%)
Frame = +1
Query: 328 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 507
EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++P
Sbjct: 57 EVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIP 116
Query: 508 VRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDC 681
VRRG W G+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D
Sbjct: 117 VRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDA 176
Query: 682 YTSARXQ 702
+++ + +
Sbjct: 177 WSTTKGE 183
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 186 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL 308
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL 51
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 114 bits (274), Expect = 3e-24
Identities = 61/119 (51%), Positives = 73/119 (61%)
Frame = +1
Query: 352 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 531
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLG---------ET 51
Query: 532 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSARXQLA 708
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR A
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTA 110
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 113 bits (273), Expect = 4e-24
Identities = 50/122 (40%), Positives = 84/122 (68%)
Frame = +1
Query: 328 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 507
+V++ + V + T++G++ + K V +GD +GH+GLGVK S + I+ A+ AKL++
Sbjct: 111 KVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGIKAALRKAKLAITK 170
Query: 508 VRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYT 687
+RRGYW + GKP+T+ K +GK GSV V + PAP+GTGIV++ +L ++G++DC+T
Sbjct: 171 IRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFT 230
Query: 688 SA 693
+
Sbjct: 231 KS 232
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 111 bits (268), Expect = 2e-23
Identities = 57/125 (45%), Positives = 83/125 (66%), Gaps = 2/125 (1%)
Frame = +1
Query: 328 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 507
EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P
Sbjct: 90 EVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNP 149
Query: 508 VRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDC 681
++ G W + + H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL +AG++D
Sbjct: 150 IKMGCGSWECRCDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDA 209
Query: 682 YTSAR 696
+T+A+
Sbjct: 210 WTTAK 214
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 106 bits (255), Expect = 6e-22
Identities = 54/125 (43%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
Frame = +1
Query: 328 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 507
EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P
Sbjct: 71 EVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGP 130
Query: 508 VRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDC 681
++ G W + + H+VP KV GK GSV + ++PAPRG G+V+ ++LL +AG++D
Sbjct: 131 IKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDA 190
Query: 682 YTSAR 696
YT+A+
Sbjct: 191 YTTAK 195
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 105 bits (251), Expect = 2e-21
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI+ AI AKL+++
Sbjct: 48 DEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNII 107
Query: 505 PVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
++RG W GKPHT+P V GK GSV+V L PAP+G G+ V K +L MAG+ D
Sbjct: 108 EIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDD 167
Query: 679 CY 684
+
Sbjct: 168 AW 169
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 186 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL 308
+EW P T+LGRLV G+I + LP+KE++I+D+ +
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI 43
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 104 bits (249), Expect = 3e-21
Identities = 51/129 (39%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
Frame = +1
Query: 322 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 501
+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ IR AI AKL++
Sbjct: 34 DDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNM 93
Query: 502 LPVRR--GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQ 675
+PV R G W + G +VP K+TG+ GS V L+PAP G G+V + +++L +AGV
Sbjct: 94 IPVMRGNGSWESGGGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVT 153
Query: 676 DCYTSARXQ 702
D ++ + Q
Sbjct: 154 DVWSRSAGQ 162
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 103 bits (248), Expect = 4e-21
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++
Sbjct: 50 DEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNII 109
Query: 505 PVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V RG W G+PHTV + GK GSV V L PAPRG G+ +K+L +AG++D
Sbjct: 110 DVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIED 169
Query: 679 CYT 687
+T
Sbjct: 170 IWT 172
Score = 39.5 bits (88), Expect = 0.10
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 192 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIID 299
W P T+LG+ V EG+ID ++ LP+KE E++D
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVD 42
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 98.7 bits (235), Expect = 2e-19
Identities = 49/125 (39%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++
Sbjct: 101 DEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNII 160
Query: 505 PVRR--GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V R G W ++ G +++ K GK GSVTV + PAP+G G+ +A + +L +AGV+D
Sbjct: 161 EVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVED 220
Query: 679 CYTSA 693
+T++
Sbjct: 221 AWTNS 225
Score = 38.7 bits (86), Expect = 0.18
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 192 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL 308
W P T+LGR V+ G I +E LP+KE EI+D L
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL 96
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 96.7 bits (230), Expect = 6e-19
Identities = 47/113 (41%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
Frame = +1
Query: 352 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--W 525
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG W
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 526 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
G PH++P +V GK GSV V L PAP+G GIV+ KK+ +AG++D +
Sbjct: 132 ECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVW 184
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +3
Query: 186 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNL 48
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 93.5 bits (222), Expect = 6e-18
Identities = 52/121 (42%), Positives = 75/121 (61%)
Frame = -3
Query: 684 VAILYTSHXKKLLRNWRRHNTSTTRGRNQPDCYGTTLAGDLARDGVWLSYLVTPVTSSDW 505
V I TS +LL +W +T T+ NQ + GTTL L GV L+ + TPVTSSDW
Sbjct: 60 VDIFNTSQLHQLLDSWGGDDTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDW 119
Query: 504 *N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDLKNLI 325
N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I
Sbjct: 120 DNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFI 179
Query: 324 I 322
+
Sbjct: 180 L 180
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 93.1 bits (221), Expect = 8e-18
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = +1
Query: 337 KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 516
+IMPVQ QT R FK FV+I D + H+ L KCSK+ ATAI VL V +
Sbjct: 104 EIMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWK 151
Query: 517 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSAR 696
G ++G TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSAR
Sbjct: 152 GTRETRLGSL-TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSAR 208
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/57 (77%), Positives = 45/57 (78%)
Frame = +1
Query: 526 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSAR 696
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSAR
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSAR 63
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 88.6 bits (210), Expect = 2e-16
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +1
Query: 562 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSAR 696
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSAR
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSAR 169
Score = 79.8 bits (188), Expect = 8e-14
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASL 102
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFK 390
DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 104 DEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 86.6 bits (205), Expect = 7e-16
Identities = 56/117 (47%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
DEVL+ M Q Q RTR K F + + L V CSKEV TA + AI L +
Sbjct: 63 DEVLRTMLAQNQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LF 115
Query: 505 PVRRGYWGNKIGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGV 672
+ GY GNKIG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 116 STQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
Score = 35.1 bits (77), Expect = 2.2
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
K + K WV + LG LV+E KI LES FS +II+FFLG L
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHL 61
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 86.6 bits (205), Expect = 7e-16
Identities = 61/173 (35%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Frame = +3
Query: 183 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL----GPSLX**GS*DHAC 350
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL L C
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 351 TETNTCRTAHTFQGICCHWRQQRSYWFGCEVQQGSRH-CHSRRYYPC*AVSSTSPKRLLG 527
T A+ G H + EVQ + C+ + C +S KR+LG
Sbjct: 121 AGQKTRFKAYVVVG-DSHQHIGLGWKSAKEVQGAIQELCNLNQ---CQTQFDSSQKRILG 176
Query: 528 *QDRKATHRPLQGHRQVWFRNSPADSCPSWYWYCVCXXXXXXXXXGWCTGLLH 686
QDR TH P+Q R+ S S YWY GW LLH
Sbjct: 177 KQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = +1
Query: 295 LISSSARPXNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 471
++ + +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 97 IVDHFLKTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 81.0 bits (191), Expect = 3e-14
Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS-V 501
D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ + + LS
Sbjct: 36 DKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSC 93
Query: 502 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDC 681
LP R Y GN I KP T PCK TG S++ L P IVS VP+KL+ A + C
Sbjct: 94 LP--RDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSC 146
Query: 682 YTSAR 696
YTSAR
Sbjct: 147 YTSAR 151
Score = 37.5 bits (83), Expect = 0.42
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3
Query: 195 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
+PVTKLG LV++ KI L P+KEFEI DFFL SL
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASL 34
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 79.8 bits (188), Expect = 8e-14
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASL 77
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 432
DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 79 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 79.4 bits (187), Expect = 1e-13
Identities = 45/124 (36%), Positives = 70/124 (56%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A +++
Sbjct: 51 ERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLI 110
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
V++ K ++ V G+ G+ V L+PAP GTGI++ + ++ +AG D Y
Sbjct: 111 KVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIY 163
Query: 685 TSAR 696
T +R
Sbjct: 164 TKSR 167
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 79.4 bits (187), Expect = 1e-13
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Frame = +1
Query: 178 KTRKSGFLSPNSAVLFAKEKSTNSRAFTCFLYQSKNSR--SLISSSARPXNDEVLKIMPV 351
K K F+ NS+ + E+ +N F ++ ++ S ++++ + +
Sbjct: 29 KNNKPHFVKANSSNVKPFERRSNPNNKKPFSKDGSGNKPNKIVKQSVTGLEEKIVGVKKI 88
Query: 352 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 531
K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK ++ V
Sbjct: 89 SKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNNMYKV------- 141
Query: 532 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYT 687
K+ K T+ +V GK G+ V + PAP+GTG+++ K +L + G +D Y+
Sbjct: 142 KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYS 193
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 79.0 bits (186), Expect = 1e-13
Identities = 56/153 (36%), Positives = 68/153 (44%)
Frame = +3
Query: 234 KIDKLESIYLFSLPIKEFEIIDFFLGPSLX**GS*DHACTETNTCRTAHTFQGICCHWRQ 413
KI LE IYLFSLPIKE EIIDFFLG SL + F+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAI-RD 60
Query: 414 QRSYWFGCEVQQGSRHCHSRRYYPC*AVSSTSPKRLLG*QDRKATHRPLQGHRQVWFRNS 593
Y EV QG H R ++P A+ +RLLG QDR+A HRPLQG R +
Sbjct: 61 YNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLCAG 120
Query: 594 PADSCPSWYWYCVCXXXXXXXXXGWCTGLLHVS 692
+W+ + W LLH+S
Sbjct: 121 ALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLS 153
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 429
DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 32 DEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/124 (33%), Positives = 68/124 (54%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
+ K +T+P ++ GK G+ T+ + PA GTG+++ +++L + GV D
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDIL 122
Query: 685 TSAR 696
T +
Sbjct: 123 TKIK 126
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +1
Query: 562 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSAR 696
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT AR
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLAR 168
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASL 102
Score = 41.1 bits (92), Expect = 0.034
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFK 390
+EVLK MPVQKQTRAGQ TRFK
Sbjct: 104 NEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/123 (34%), Positives = 69/123 (56%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +++
Sbjct: 14 ERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKNLI 73
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
V +G T+P ++ G+ GS V + PA GTG++S + +L +AGV D
Sbjct: 74 SV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDIL 125
Query: 685 TSA 693
T +
Sbjct: 126 TKS 128
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 71.3 bits (167), Expect = 3e-11
Identities = 42/128 (32%), Positives = 68/128 (53%)
Frame = +1
Query: 310 ARPXNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 489
++ +++V+KI V K + G+R F A +GD G +G+G + EV AIR +I A
Sbjct: 27 SKEYSEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESA 86
Query: 490 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAG 669
K ++ + K HT+P +V GK S V L P+ GTGI++ + ++ AG
Sbjct: 87 KKHLVKIN--------FKGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAG 138
Query: 670 VQDCYTSA 693
+QD T +
Sbjct: 139 IQDVLTKS 146
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 70.9 bits (166), Expect = 4e-11
Identities = 39/118 (33%), Positives = 68/118 (57%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + AK + +
Sbjct: 73 EKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEAKKTAI 132
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V I K +++P ++ + G+ +V + PA GTG+V+ + +L +AG Q+
Sbjct: 133 TV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQN 183
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = -3
Query: 567 DLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 388
+LA GV + LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 387 ETCALSGTCLFLYRHDLKNLII 322
E L+GT L L HDL++ ++
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVL 99
Score = 42.7 bits (96), Expect = 0.011
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -1
Query: 320 QGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNPLFLVFL 174
Q A+EEI+DLE F+ R QV+ L+ D + A++ + G NP VFL
Sbjct: 100 QRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNPFLRVFL 148
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 67.7 bits (158), Expect = 3e-10
Identities = 40/123 (32%), Positives = 66/123 (53%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+ AK +++
Sbjct: 45 EKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLI 104
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
V + TVP +V G G+ V + PA GTG+++ + ++ +AG+ D Y
Sbjct: 105 RVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVY 156
Query: 685 TSA 693
+
Sbjct: 157 AKS 159
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 67.7 bits (158), Expect = 3e-10
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 505 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGV 672
PV G T+P ++ G+ + V L PA GTG+++ VP+ + +AG+
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGI 126
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 67.3 bits (157), Expect = 5e-10
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 498
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 499 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+ + +G ++ +V G+ G+ V L PAP+GTGI++ + ++ +AG D
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSD 177
Query: 679 CYT 687
YT
Sbjct: 178 IYT 180
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 66.9 bits (156), Expect = 6e-10
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 501
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 502 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+PV G T+P +V G+ + V L PA GTGI++ + ++ +AG+Q+
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQN 126
Query: 679 CYTSA 693
T +
Sbjct: 127 ILTKS 131
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 66.9 bits (156), Expect = 6e-10
Identities = 36/118 (30%), Positives = 67/118 (56%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V + K T P + G G+ V L PA GTG+++ + +L MAGV++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 259
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/118 (30%), Positives = 65/118 (55%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V + K T P + G G+ V L PA GTG+++ + +L MAGV++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 296
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/118 (27%), Positives = 68/118 (57%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V + K +++P ++G G+ V L PA GTG+++ + +L +AG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKN 178
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/118 (29%), Positives = 66/118 (55%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A++ AK SV+
Sbjct: 515 ERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRALVDAKKSVV 574
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V + T+P +V K + ++PA GTG+++ + +L +AGVQ+
Sbjct: 575 RV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQN 625
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +1
Query: 604 PAPRGTGIVSAPVPKKLLXMAGVQDCYTSAR 696
PAPRGTGIVSAPVPKKLL MAG+ DCYTSAR
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSAR 31
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 64.1 bits (149), Expect = 4e-09
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Frame = +1
Query: 361 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNK 534
T+ G+R F V +GD GH+G G +KEV AI I AK +V+ P+ G
Sbjct: 42 TKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRVPIVDG----- 96
Query: 535 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYT 687
TVP V G G+ + ++PA RGTG+V+ K + +AG D T
Sbjct: 97 -----TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLT 142
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 62.5 bits (145), Expect = 1e-08
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK +
Sbjct: 17 EKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAKKQL- 75
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLXMAGVQDC 681
VR G T+P G+ G+ L PA +GTGIV+ + +L + G+ D
Sbjct: 76 -VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDV 128
Query: 682 YT 687
T
Sbjct: 129 LT 130
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/118 (27%), Positives = 66/118 (55%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V I K ++P V G G+ + + P+ G+G+++ + +L +AG+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKN 138
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 174 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 281
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 58.4 bits (135), Expect = 2e-07
Identities = 41/118 (34%), Positives = 58/118 (49%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V IG T P V G+ + V L PA GTG+++ + +L AGV D
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHD 153
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 57.2 bits (132), Expect = 5e-07
Identities = 45/157 (28%), Positives = 75/157 (47%)
Frame = +1
Query: 223 FAKEKSTNSRAFTCFLYQSKNSRSLISSSARPXNDEVLKIMPVQKQTRAGQRTRFKAFVA 402
F +K TNS+ F KN+ + ++++ I V + G+R F A V
Sbjct: 66 FKFKKKTNSQNF------KKNANK---KPEKEFEEKIVNIARVTNVVKGGRRFSFAAVVV 116
Query: 403 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCG 582
+GD G +G G + EV AI+ A+ A+ +++ V I TVP + K
Sbjct: 117 VGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV-------PIINKSTVPHEQWAKFL 169
Query: 583 SVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSA 693
+ V L PAP+G GI+++ + ++ +AG D YT +
Sbjct: 170 ASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKS 206
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 56.8 bits (131), Expect = 6e-07
Identities = 39/133 (29%), Positives = 65/133 (48%)
Frame = +1
Query: 289 RSLISSSARPXNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 468
RS +++ ++++ I V K + G+R F A V +GD NG +G G+ + +V AI
Sbjct: 6 RSKANNNTEELIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAI 65
Query: 469 RGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPK 648
R + A+ + V + PH +V G G+ V L PA GTG+++ +
Sbjct: 66 RKGVERARKDMALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIAGGPVR 117
Query: 649 KLLXMAGVQDCYT 687
+L AGV + T
Sbjct: 118 AVLEAAGVSNILT 130
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 8e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 192 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 305
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 56.0 bits (129), Expect = 1e-06
Identities = 39/123 (31%), Positives = 58/123 (47%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + AK +
Sbjct: 47 DRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMF 106
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
V R T+ V G + TV L PA GTG+++ + ++ AG+ D
Sbjct: 107 SVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVL 158
Query: 685 TSA 693
T +
Sbjct: 159 TKS 161
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 55.6 bits (128), Expect = 1e-06
Identities = 36/119 (30%), Positives = 58/119 (48%)
Frame = +1
Query: 322 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 501
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 502 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+ V T+P +V K G V L PA GTG+++ + +L +AGV+D
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVED 126
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/118 (26%), Positives = 61/118 (51%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
V + K +++ G G V + PA GTG+++ + +L +AGV++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKN 129
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +1
Query: 316 PXNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 495
P D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ +
Sbjct: 162 PLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSII 221
Query: 496 SV 501
V
Sbjct: 222 LV 223
Score = 39.9 bits (89), Expect = 0.079
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 222 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSL 320
V++ K+ L+ +YLFSLPIKEFE+ DF LG L
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPL 163
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 54.4 bits (125), Expect = 3e-06
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
++++ I V K + G+R F A V +GD G +G G ++EV AI A AK +++
Sbjct: 61 EKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAAKKTMI 120
Query: 505 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
P+R G + G+ G+ G+ V L AP GTGI++ + + GV D
Sbjct: 121 RVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFESLGVAD 171
Query: 679 CYTSA 693
T +
Sbjct: 172 VVTKS 176
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
D V+KI + G+R F A V +G+ +G +G G + EV +++ A A S++
Sbjct: 23 DRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQASRSMI 82
Query: 505 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
P+ G ++P +V G+ G+ V LIPA GTGI++ + + G+ D
Sbjct: 83 HVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHD 132
Query: 679 CYTSA 693
T +
Sbjct: 133 ILTKS 137
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 53.6 bits (123), Expect = 6e-06
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = -1
Query: 692 ADV*QSCTPAX*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLP 525
A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +CG LLP
Sbjct: 22 AHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP 76
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 52.8 bits (121), Expect = 1e-05
Identities = 36/123 (29%), Positives = 59/123 (47%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+ ++
Sbjct: 73 EKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKRMV 132
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCY 684
V K T+P +V G V L PA GTG+++ + +L AGV++
Sbjct: 133 SVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVL 184
Query: 685 TSA 693
T +
Sbjct: 185 TKS 187
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/104 (27%), Positives = 47/104 (45%)
Frame = +1
Query: 385 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 564
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 565 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSAR 696
+TG+ + + P P G P +L + G+ C R
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHCSFKVR 283
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 52.4 bits (120), Expect = 1e-05
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 498
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 499 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+P+R G T+ V G+ G+ V L A GTGI++ + + GV D
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHD 134
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 52.0 bits (119), Expect = 2e-05
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +++
Sbjct: 18 DRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKNLI 77
Query: 505 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
PV G T+P + G +V L PA GTG+ + + +L GV D
Sbjct: 78 RVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTD 127
Query: 679 CYTSAR 696
++
Sbjct: 128 VLAKSK 133
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 50.8 bits (116), Expect = 4e-05
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +1
Query: 331 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 510
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 511 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+R + HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKN 112
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 50.4 bits (115), Expect = 6e-05
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
+ V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +++
Sbjct: 13 ESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGAMI 72
Query: 505 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
P+R G T+ K G+ + + PAP GTGIV+ +K M GV D
Sbjct: 73 RFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSD 123
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 49.6 bits (113), Expect = 1e-04
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 498
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 499 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+P+R G T+ V GK G+ + L AP+GTGI++ + + + G++D
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKD 123
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 49.2 bits (112), Expect = 1e-04
Identities = 35/118 (29%), Positives = 58/118 (49%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 504
++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +++
Sbjct: 15 EKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKNLI 74
Query: 505 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+ G+ I PH V G + L PA GTGIV+ + +L MAGV++
Sbjct: 75 TI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVAGSRIRLILEMAGVKN 125
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 48.8 bits (111), Expect = 2e-04
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +3
Query: 198 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL 308
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLL 72
Score = 43.6 bits (98), Expect = 0.006
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 325 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 432
+EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 77 EEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +1
Query: 316 PXNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 486
P D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+ A+ IIL
Sbjct: 28 PLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAVCRTIIL 84
Score = 33.9 bits (74), Expect = 5.2
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 234 KIDKLESIYLFSLPIKEFEIIDFFL 308
KI L+ +YLFS PIKEFE+ DF L
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLL 25
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 47.6 bits (108), Expect = 4e-04
Identities = 34/135 (25%), Positives = 65/135 (48%)
Frame = +1
Query: 274 QSKNSRSLISSSARPXNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 453
+S N+++ ++++ + V K + G+ F A +GD G +G+G S+E
Sbjct: 6 KSANTKTPDEVKTDGLKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSRE 65
Query: 454 VATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 633
V A++ A+ A+ ++ V N I T+ V G+ G+ V + PA GTGI++
Sbjct: 66 VPLAVQKAMDEARQRMVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIA 117
Query: 634 APVPKKLLXMAGVQD 678
+ + + GV +
Sbjct: 118 GGPMRAIFEVMGVHN 132
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 45.6 bits (103), Expect = 0.002
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -2
Query: 304 KKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 179
K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 12 KVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 45.6 bits (103), Expect = 0.002
Identities = 36/133 (27%), Positives = 62/133 (46%)
Frame = +1
Query: 280 KNSRSLISSSARPXNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 459
K SR+ S+ ++ ++ + V K + G+R F V IGD G +G G+ EV+
Sbjct: 5 KKSRNTHGSN--DFSELIVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVS 62
Query: 460 TAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 639
A A+ A+ +++ V + + T+ + K S V L A GTGI++
Sbjct: 63 EAKVKAVNAARKNMIRVH-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIAGG 115
Query: 640 VPKKLLXMAGVQD 678
+ + + GVQD
Sbjct: 116 SIRLIFEVLGVQD 128
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 44.8 bits (101), Expect = 0.003
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +1
Query: 349 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 525
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 526 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
N+ T+ VT K V L+ P G G+ ++ AG+ D
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGLRCPHRIFEMCRAAGIHD 452
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 44.8 bits (101), Expect = 0.003
Identities = 34/115 (29%), Positives = 54/115 (46%)
Frame = +1
Query: 334 LKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR 513
L I V QTR G+ G+ NG +G+G+ S E+ A + A A ++ PV
Sbjct: 260 LVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVKNMQPVP 319
Query: 514 RGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
R Y + T+ V GK G+V ++L+ P G G+ + ++ AG+ D
Sbjct: 320 R-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGLRCQHLIFEMCRAAGIHD 367
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 43.6 bits (98), Expect = 0.006
Identities = 36/85 (42%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 418 GHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK--PHTVPCKVTGKCGSV 588
GH GL CS EVATAI+ I + L S P+ R GN GK P P ++ S+
Sbjct: 98 GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSLPSVCPMQIRDYHSSM 155
Query: 589 TVRLIPAPRGTGIVSAPVPKKLLXM 663
LI AP T I+S VPK LL +
Sbjct: 156 LACLITAP-STCIISGLVPKNLLLL 179
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 43.2 bits (97), Expect = 0.008
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +1
Query: 349 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 528
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 529 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
N+ T+ +VT K VRL P G G+ + ++ AG++D
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGLRVSHRIFEMCRAAGIRD 425
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 43.2 bits (97), Expect = 0.008
Identities = 32/114 (28%), Positives = 54/114 (47%)
Frame = +1
Query: 349 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 528
V QTR G+ + +G+ NG IGLG S + A+ A ++A +++P+RR Y
Sbjct: 260 VTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKNMVPIRR-Y-- 316
Query: 529 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTS 690
+ T+ KV K V + P G G+ + ++ +AG++D S
Sbjct: 317 ----EDRTIYGKVKVKIAGTVVEMAARPPGFGLRISHRLFEICRLAGIKDLSAS 366
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 42.3 bits (95), Expect = 0.015
Identities = 32/110 (29%), Positives = 52/110 (47%)
Frame = +1
Query: 349 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 528
V QTR G+ + +G+ NG +G+G S E + A A +LA ++ P+RR Y
Sbjct: 253 VANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIRNMRPIRR-Y-- 309
Query: 529 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+ T+ VT K V++ P G G+ + ++ AG+QD
Sbjct: 310 ----EDRTIYGSVTAKVSGTVVKMNARPPGFGLRVSHRIFEMCRAAGIQD 355
>UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces
cerevisiae YBR251w MRPS5 ribosomal protein S5; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P33759
Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein
S5 - Yarrowia lipolytica (Candida lipolytica)
Length = 312
Score = 39.1 bits (87), Expect = 0.14
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +1
Query: 322 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLS 498
N +L V+ QT G++ +F VA GD G +GLG K A+ A+ A S
Sbjct: 148 NTRLLLNRIVKSQTGKGKKMQFCVLVATGDGKGMLGLGEGKDPLSFPVALEKAMWKATRS 207
Query: 499 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+ V R + N+ T+ +V K +V + + AP G G+ P+ ++ M G+ D
Sbjct: 208 MKMVPR--YQNR-----TIYGEVYKKFHAVHLTMRSAPAGHGLRVNPIVSQMCSMVGITD 260
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 38.3 bits (85), Expect = 0.24
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 265 FLYQSKNSRSLISSSARPXNDEVLKIMPVQKQT---RAGQRTRFKAFVAIGDNNGHIGLG 435
++Y+ N+ L +S + N+ + KI+ ++K + + G+ R+K + +G+ G IGLG
Sbjct: 77 YIYKYNNNIKLNNSIIKLNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLG 136
Query: 436 VKCSKEVATAIRGAIILAKLSVL 504
V SK + I AII AK+ L
Sbjct: 137 V--SKNI--NINKAIISAKIKAL 155
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.55
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 480 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 382
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 34.7 bits (76), Expect = 3.0
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 616 GTGIVSAPVPKKLLXMAGVQDCYTSAR 696
G+ +V+ VPKK+L AG++D +TS+R
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSR 28
>UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S ribosomal
protein S5; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to 28S ribosomal protein S5 - Nasonia
vitripennis
Length = 405
Score = 34.3 bits (75), Expect = 3.9
Identities = 28/112 (25%), Positives = 48/112 (42%)
Frame = +1
Query: 370 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 549
G++ + +FV G+ NG G+ + S E TA+R A A ++ V + K H
Sbjct: 162 GRKRSYSSFVITGNKNGLCGIALGKSAEGRTALRLARNRAGFKLMHV-------PLYKNH 214
Query: 550 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQDCYTSARXQL 705
TV + GS + + P G G+V K + G++D + +
Sbjct: 215 TVFHDFFTQFGSTKLFVTKKPEGYGLVCHRAIKCACEVIGIKDLHVKVEGSI 266
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.3 bits (75), Expect = 3.9
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 349 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 468
V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 154 VSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 33.9 bits (74), Expect = 5.2
Identities = 29/110 (26%), Positives = 45/110 (40%)
Frame = +1
Query: 349 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 528
V QTR G+ G+ G +G+G +E A I A ++ PV R Y
Sbjct: 258 VVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKNMQPVPR-Y-- 314
Query: 529 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLXMAGVQD 678
+ T+ V GK +V V+L+ P G G+ + + G+ D
Sbjct: 315 ----EERTIYGDVEGKVSAVEVKLMARPPGFGLRCQKLIFDMAKAVGIHD 360
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 9.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 388 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 540
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q8WRW5 Cluster: Odorant binding protein ASP1; n=2; Apis
mellifera|Rep: Odorant binding protein ASP1 - Apis
mellifera (Honeybee)
Length = 144
Score = 33.1 bits (72), Expect = 9.0
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 229 KEKSTNSRAFTCFLYQSKNSRSLISSSARPXNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 408
K N + TC++Y + SL+ A D +L ++P Q Q RA Q K G
Sbjct: 61 KGNLVNEPSITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQLQERA-QSVMGKCLPTSG 119
Query: 409 -DNNGHIGLGVKCSKEVA 459
DN I KC +E A
Sbjct: 120 SDNCNKIYNLAKCVQESA 137
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 9.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 331 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 477
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,463,748
Number of Sequences: 1657284
Number of extensions: 15421002
Number of successful extensions: 43818
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 40719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43517
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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