Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E01
(861 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 33 0.069
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.21
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.28
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.28
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 7.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 7.9
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 32.7 bits (71), Expect = 0.069
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 769 PPXXFXKKKXXXPPPPPPPXXXPPPKK 849
PP KK PP PPPP PP+K
Sbjct: 214 PPKFRHKKVPRGPPSPPPPVLHSPPRK 240
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.21
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 752 GRXPPPPPXXXXKKNXXXPPPPPXP 826
G PPPPP PPPPP P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.64
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 742 IFXGAGXPPPPXXFXKKKXXXPPPPPP 822
I G PPPP PPPPPP
Sbjct: 757 IMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 761 PPPPPXXXXKKNXXXPPPPPXPXXG 835
PPPPP PPPPP G
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = +2
Query: 755 RXPPPPPXXXXKKNXXXPP---PPPXPXXGXPXKKP 853
+ PPPPP P PPP P G P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 769 PPXXFXKKKXXXPPPPPPPXXXPPPKKT 852
PP K+ P PPPPP PP+ T
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQST 251
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 805 PPPPPPPXXXPPPKKT 852
PPPPPPP P T
Sbjct: 238 PPPPPPPTLPPQSTNT 253
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.28
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 752 GRXPPPPPXXXXKKNXXXPPPPP 820
G PPPPP + PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 761 PPPPPXXXXKKNXXXPPPPPXP 826
PPPPP + PPPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 763 PPPPXXFXKKKXXXPPPPPPPXXXPPP 843
P P + P PPPPP PPP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 754 AGXPPPPXXFXKKKXXXPPPPPPPXXXPPP 843
A PPPP PP P P PPP
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 763 PPPPXXFXKKKXXXPPPPPPPXXXPPP 843
PPPP P P PP PPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +2
Query: 761 PPPPPXXXXKKNXXXPPPPPXPXXGXP 841
PPPP PPPP P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 770 PPXXXXKKNXXXPPPPPXP 826
PP N PPPPP P
Sbjct: 325 PPIGNGSSNSSLPPPPPPP 343
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 754 AGXPPPPXXFXKKKXXXPPPPPPPXXXPPPK 846
+G PP P K PP PPP P PK
Sbjct: 1176 SGIPPVP----KPAAGVPPVPPPSEAPPVPK 1202
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,312,324
Number of Sequences: 5004
Number of extensions: 36983
Number of successful extensions: 293
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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