Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D23
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1593 + 38502884-38502993,38503580-38503665,38504352-385044...    69   5e-12
05_04_0342 - 20425141-20425311,20425415-20425558,20426506-204266...    69   6e-12
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285...    68   1e-11
07_01_0861 + 7152976-7153061,7153222-7153310,7154862-7155013,715...    67   1e-11
02_05_0567 + 30029862-30030136,30030299-30030384,30031663-300318...    66   3e-11
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     62   6e-10
01_06_1141 + 34845834-34845931,34846110-34846198,34846535-348466...    57   2e-08
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750...    53   3e-07
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496...    43   4e-04
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133...    35   0.096

>01_06_1593 +
           38502884-38502993,38503580-38503665,38504352-38504497,
           38504817-38504933,38505028-38505144,38505858-38506001,
           38506099-38506251
          Length = 290

 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 26/59 (44%), Positives = 46/59 (77%)
 Frame = +2

Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
           K  ++  VP+ ++P +NFVG+LLGP+GN++K+++  T C++ + GRGS++D  KE++LR
Sbjct: 139 KKVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRGRGSVKDSVKEDKLR 197


>05_04_0342 -
           20425141-20425311,20425415-20425558,20426506-20426622,
           20426719-20426835,20427533-20427678,20428208-20428293,
           20428780-20428889
          Length = 296

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 26/59 (44%), Positives = 46/59 (77%)
 Frame = +2

Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
           K  ++  VP+ ++P +NFVG+LLGP+GN++K+++  T C++ + GRGS++D  KE++LR
Sbjct: 139 KKVVRIDVPVDKYPNYNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEDKLR 197


>05_05_0237 -
           23526613-23527178,23527979-23528066,23528384-23528527,
           23528674-23528790,23528860-23528970,23530911-23531062,
           23531362-23531450,23531664-23531761
          Length = 454

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
 Frame = +2

Query: 368 SYHQGLKICGCVPCPNQ--PKSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCK 541
           S+ QG    G    P+    K  L+  +P   +P FNF+G+LLGP+GN++K+++  T C+
Sbjct: 116 SFSQGPGWQGAPQSPSSYIVKKILRLEIPTDAYPNFNFIGRLLGPRGNSLKRIEASTGCR 175

Query: 542 MAVLGRGSMRDRQKEEELR 598
           + + G+GS++D  KEE+L+
Sbjct: 176 VFIRGKGSIKDPNKEEQLK 194


>07_01_0861 +
           7152976-7153061,7153222-7153310,7154862-7155013,
           7155254-7155382,7155465-7155581,7156353-7156496,
           7156749-7156851,7157471-7157565,7157953-7158096
          Length = 352

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 25/59 (42%), Positives = 45/59 (76%)
 Frame = +2

Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
           K  ++  VP+  +P FNFVG++LGP+GN++K+++  T C++ + G+GS++D  KEE+L+
Sbjct: 138 KKIVRMEVPVDAYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDADKEEKLK 196


>02_05_0567 +
           30029862-30030136,30030299-30030384,30031663-30031811,
           30032581-30032685,30032779-30032895,30033251-30033394,
           30033519-30033668
          Length = 341

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 24/59 (40%), Positives = 45/59 (76%)
 Frame = +2

Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
           K  +K  +P+ ++P FNFVG++LGP+GN++K+++  T C++ + GRGS++D  +E+ +R
Sbjct: 191 KKTMKVDIPVDKYPTFNFVGRILGPRGNSLKRVEATTDCRVLIRGRGSIKDPAREDMMR 249


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 62.1 bits (144), Expect = 6e-10
 Identities = 22/52 (42%), Positives = 40/52 (76%)
 Frame = +2

Query: 419 PKSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
           PK Q K  +P+KE P +NF+G ++GP+GNT K+++++T  K+ + G+GS+++
Sbjct: 93  PKLQKKLYIPMKEFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKE 144


>01_06_1141 +
           34845834-34845931,34846110-34846198,34846535-34846686,
           34847473-34847583,34847702-34847818,34847989-34848156,
           34848563-34848703
          Length = 291

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 21/51 (41%), Positives = 38/51 (74%)
 Frame = +2

Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
           K  ++  VP   +P FNF+G+LLGP+GN++K+++  T C++ + G+GS++D
Sbjct: 136 KKIVRLEVPTDAYPHFNFIGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKD 186


>03_06_0443 +
           33973229-33973311,33973422-33973510,33974873-33975024,
           33975463-33975579,33975729-33975776,33976169-33976312,
           33976715-33976858
          Length = 258

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 19/42 (45%), Positives = 34/42 (80%)
 Frame = +2

Query: 458 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQK 583
           H +FNFVG++LGP+GN++K+++  T C++ + G+GS++D  K
Sbjct: 106 HQEFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGK 147


>08_01_0005 +
           47929-48201,48663-48788,49009-49054,49188-49270,
           49651-49728,49831-49884,50004-50138,50222-51691
          Length = 754

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 18/43 (41%), Positives = 27/43 (62%)
 Frame = +2

Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLG 556
           + K  +P K +P  N +G L+GP+ N  K+LQE+T  K+ V G
Sbjct: 170 ETKIPLPTKTYPGHNIIGVLMGPESNAQKRLQEETGAKIRVYG 212


>02_01_0198 +
           1334563-1334994,1335872-1335919,1336096-1336351,
           1336733-1336881,1336969-1337097,1337425-1337592,
           1338416-1338610
          Length = 458

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +2

Query: 476 VGKLLGPKGNTMKQLQEDTLCKMAVL--GRGSMRDRQKEEELRXVIRP*VLSSS*RSHVE 649
           VG L+G +G+T+K+L EDT  ++ VL     +  +R  + +    I          S  E
Sbjct: 108 VGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFIAKVTFEMVLISATE 167

Query: 650 IS-AIAPPAXGSRXELHMHLAEVKK 721
            S A  PPA  +  ++ MH+ +++K
Sbjct: 168 ESQAELPPAMDAAIKIFMHINDIEK 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,685,373
Number of Sequences: 37544
Number of extensions: 315837
Number of successful extensions: 648
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)