Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D23
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein. 101 3e-21
BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, R... 101 3e-21
AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein. 101 3e-21
AF051322-1|AAC99295.1| 264|Homo sapiens Sam68-like phosphotyros... 101 3e-21
AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyros... 101 3e-21
Z93021-1|CAI21649.1| 349|Homo sapiens KH domain containing, RNA... 100 8e-21
BC034043-1|AAH34043.1| 349|Homo sapiens KH domain containing, R... 100 8e-21
AL391644-1|CAI15262.1| 349|Homo sapiens KH domain containing, R... 100 8e-21
AL360220-1|CAH70882.1| 349|Homo sapiens KH domain containing, R... 100 8e-21
AL355347-1|CAI14907.1| 349|Homo sapiens KH domain containing, R... 100 8e-21
AL138882-1|CAI19748.1| 349|Homo sapiens KH domain containing, R... 100 8e-21
AL049544-1|CAI19918.1| 349|Homo sapiens KH domain containing, R... 100 8e-21
M88108-1|AAA59990.1| 443|Homo sapiens p62 protein. 98 3e-20
BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, R... 98 3e-20
BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein. 98 3e-20
BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, R... 98 3e-20
AY077838-1|AAL77219.1| 349|Homo sapiens Sam68-like mammalian pr... 98 3e-20
AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, R... 98 3e-20
AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, R... 98 3e-20
AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens ... 98 3e-20
DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein. 79 2e-14
BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH dom... 79 2e-14
BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein. 79 2e-14
AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein. 79 2e-14
AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH dom... 79 2e-14
AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH dom... 79 2e-14
AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH dom... 79 2e-14
AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH dom... 79 2e-14
AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH dom... 79 2e-14
AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH dom... 79 2e-14
AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens ... 79 2e-14
AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein. 79 2e-14
AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein. 79 2e-14
AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein. 79 2e-14
AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein. 79 2e-14
AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein. 79 2e-14
AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein. 79 2e-14
AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK... 79 2e-14
AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK... 79 2e-14
AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK... 79 2e-14
AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK... 79 2e-14
AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK... 79 2e-14
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 54 7e-07
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 54 7e-07
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 54 7e-07
L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1... 54 7e-07
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 54 7e-07
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 54 7e-07
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 54 7e-07
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 54 7e-07
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 54 7e-07
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 54 7e-07
AJ000051-1|CAA03883.1| 295|Homo sapiens splicing factor SF1 pro... 54 7e-07
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 36 0.14
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 36 0.25
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 36 0.25
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 35 0.33
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 35 0.33
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 35 0.33
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 35 0.33
BC011788-1|AAH11788.1| 411|Homo sapiens PRPF40A protein protein. 31 7.1
AK024810-1|BAB15016.1| 323|Homo sapiens protein ( Homo sapiens ... 31 7.1
>BC068536-1|AAH68536.1| 345|Homo sapiens KHDRBS3 protein protein.
Length = 345
Score = 101 bits (243), Expect = 3e-21
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
K L+P+K+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KEEELR
Sbjct: 58 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 117
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXL 727
+ HV I APPA H L E+KK L
Sbjct: 118 KYFHLNDDLHVLIEVFAPPAEAYARMGHA-LEEIKKFL 154
>BC032606-1|AAH32606.1| 346|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 3 protein.
Length = 346
Score = 101 bits (243), Expect = 3e-21
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
K L+P+K+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KEEELR
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXL 727
+ HV I APPA H L E+KK L
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHA-LEEIKKFL 155
>AF069681-1|AAC24857.1| 346|Homo sapiens T-Star protein.
Length = 346
Score = 101 bits (243), Expect = 3e-21
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
K L+P+K+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KEEELR
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXL 727
+ HV I APPA H L E+KK L
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHA-LEEIKKFL 155
>AF051322-1|AAC99295.1| 264|Homo sapiens Sam68-like phosphotyrosine
protein beta protein.
Length = 264
Score = 101 bits (243), Expect = 3e-21
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
K L+P+K+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KEEELR
Sbjct: 52 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 111
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXL 727
+ HV I APPA H L E+KK L
Sbjct: 112 KYFHLNDDLHVLIEVFAPPAEAYARMGHA-LEEIKKFL 148
>AF051321-1|AAC99294.1| 346|Homo sapiens Sam68-like phosphotyrosine
protein alpha protein.
Length = 346
Score = 101 bits (243), Expect = 3e-21
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
K L+P+K+ PKFNFVGKLLGP+GN++K+LQE+TL KM++LG+GSMRD+ KEEELR
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXL 727
+ HV I APPA H L E+KK L
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHA-LEEIKKFL 155
>Z93021-1|CAI21649.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 100 bits (239), Expect = 8e-21
Identities = 52/109 (47%), Positives = 67/109 (61%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
+ L+P+K++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KEEELR
Sbjct: 63 RVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEA 122
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXME 760
S HV I APP H L E+KK L E E
Sbjct: 123 KYAHLSDELHVLIEVFAPPGEAYSRMSHA-LEEIKKFLVPDYNDEIRQE 170
>BC034043-1|AAH34043.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 100 bits (239), Expect = 8e-21
Identities = 52/109 (47%), Positives = 67/109 (61%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
+ L+P+K++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KEEELR
Sbjct: 63 RVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEA 122
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXME 760
S HV I APP H L E+KK L E E
Sbjct: 123 KYAHLSDELHVLIEVFAPPGEAYSRMSHA-LEEIKKFLVPDYNDEIRQE 170
>AL391644-1|CAI15262.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 100 bits (239), Expect = 8e-21
Identities = 52/109 (47%), Positives = 67/109 (61%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
+ L+P+K++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KEEELR
Sbjct: 63 RVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEA 122
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXME 760
S HV I APP H L E+KK L E E
Sbjct: 123 KYAHLSDELHVLIEVFAPPGEAYSRMSHA-LEEIKKFLVPDYNDEIRQE 170
>AL360220-1|CAH70882.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 100 bits (239), Expect = 8e-21
Identities = 52/109 (47%), Positives = 67/109 (61%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
+ L+P+K++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KEEELR
Sbjct: 63 RVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEA 122
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXME 760
S HV I APP H L E+KK L E E
Sbjct: 123 KYAHLSDELHVLIEVFAPPGEAYSRMSHA-LEEIKKFLVPDYNDEIRQE 170
>AL355347-1|CAI14907.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 100 bits (239), Expect = 8e-21
Identities = 52/109 (47%), Positives = 67/109 (61%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
+ L+P+K++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KEEELR
Sbjct: 63 RVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEA 122
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXME 760
S HV I APP H L E+KK L E E
Sbjct: 123 KYAHLSDELHVLIEVFAPPGEAYSRMSHA-LEEIKKFLVPDYNDEIRQE 170
>AL138882-1|CAI19748.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 100 bits (239), Expect = 8e-21
Identities = 52/109 (47%), Positives = 67/109 (61%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
+ L+P+K++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KEEELR
Sbjct: 63 RVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEA 122
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXME 760
S HV I APP H L E+KK L E E
Sbjct: 123 KYAHLSDELHVLIEVFAPPGEAYSRMSHA-LEEIKKFLVPDYNDEIRQE 170
>AL049544-1|CAI19918.1| 349|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 2 protein.
Length = 349
Score = 100 bits (239), Expect = 8e-21
Identities = 52/109 (47%), Positives = 67/109 (61%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613
+ L+P+K++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KEEELR
Sbjct: 63 RVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEA 122
Query: 614 *VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXME 760
S HV I APP H L E+KK L E E
Sbjct: 123 KYAHLSDELHVLIEVFAPPGEAYSRMSHA-LEEIKKFLVPDYNDEIRQE 170
>M88108-1|AAA59990.1| 443|Homo sapiens p62 protein.
Length = 443
Score = 98.3 bits (234), Expect = 3e-20
Identities = 53/127 (41%), Positives = 74/127 (58%)
Frame = +2
Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRX 601
K + + L+P+K++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KEEELR
Sbjct: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRK 214
Query: 602 VIRP*VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXMEXXIXXIX 781
P + HV I PP H + EVKK L + + E +
Sbjct: 215 GGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHA-MEEVKKFLVPDMMDDICQEQFLELSY 273
Query: 782 XSGECTP 802
+G P
Sbjct: 274 LNGVPEP 280
>BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 98.3 bits (234), Expect = 3e-20
Identities = 53/127 (41%), Positives = 74/127 (58%)
Frame = +2
Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRX 601
K + + L+P+K++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KEEELR
Sbjct: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRK 214
Query: 602 VIRP*VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXMEXXIXXIX 781
P + HV I PP H + EVKK L + + E +
Sbjct: 215 GGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHA-MEEVKKFLVPDMMDDICQEQFLELSY 273
Query: 782 XSGECTP 802
+G P
Sbjct: 274 LNGVPEP 280
>BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein.
Length = 381
Score = 98.3 bits (234), Expect = 3e-20
Identities = 53/127 (41%), Positives = 74/127 (58%)
Frame = +2
Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRX 601
K + + L+P+K++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KEEELR
Sbjct: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRK 214
Query: 602 VIRP*VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXMEXXIXXIX 781
P + HV I PP H + EVKK L + + E +
Sbjct: 215 GGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHA-MEEVKKFLVPDMMDDICQEQFLELSY 273
Query: 782 XSGECTP 802
+G P
Sbjct: 274 LNGVPEP 280
>BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 98.3 bits (234), Expect = 3e-20
Identities = 53/127 (41%), Positives = 74/127 (58%)
Frame = +2
Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRX 601
K + + L+P+K++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KEEELR
Sbjct: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRK 214
Query: 602 VIRP*VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXMEXXIXXIX 781
P + HV I PP H + EVKK L + + E +
Sbjct: 215 GGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHA-MEEVKKFLVPDMMDDICQEQFLELSY 273
Query: 782 XSGECTP 802
+G P
Sbjct: 274 LNGVPEP 280
>AY077838-1|AAL77219.1| 349|Homo sapiens Sam68-like mammalian
protein 1 protein.
Length = 349
Score = 98.3 bits (234), Expect = 3e-20
Identities = 51/106 (48%), Positives = 65/106 (61%)
Frame = +2
Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP*VL 622
+P+K++PKFNFVGKLLGP+GN++K+LQE+T KM++LG+GSMRD+ KEEELR
Sbjct: 66 IPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYA 125
Query: 623 SSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXME 760
S HV I APP H L E+KK L E E
Sbjct: 126 HLSDELHVLIEVFAPPGEAYSRMSHA-LEEIKKFLVPDYNDEIRQE 170
>AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 98.3 bits (234), Expect = 3e-20
Identities = 53/127 (41%), Positives = 74/127 (58%)
Frame = +2
Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRX 601
K + + L+P+K++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KEEELR
Sbjct: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRK 214
Query: 602 VIRP*VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXMEXXIXXIX 781
P + HV I PP H + EVKK L + + E +
Sbjct: 215 GGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHA-MEEVKKFLVPDMMDDICQEQFLELSY 273
Query: 782 XSGECTP 802
+G P
Sbjct: 274 LNGVPEP 280
>AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 98.3 bits (234), Expect = 3e-20
Identities = 53/127 (41%), Positives = 74/127 (58%)
Frame = +2
Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRX 601
K + + L+P+K++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KEEELR
Sbjct: 155 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRK 214
Query: 602 VIRP*VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXMEXXIXXIX 781
P + HV I PP H + EVKK L + + E +
Sbjct: 215 GGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHA-MEEVKKFLVPDMMDDICQEQFLELSY 273
Query: 782 XSGECTP 802
+G P
Sbjct: 274 LNGVPEP 280
>AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ34027 fis, clone FCBBF2003549, highly similar to
GAP-associated tyrosine phosphoprotein p62 (Sam68). ).
Length = 418
Score = 98.3 bits (234), Expect = 3e-20
Identities = 53/127 (41%), Positives = 74/127 (58%)
Frame = +2
Query: 422 KSQLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRX 601
K + + L+P+K++PKFNFVGK+LGP+GNT+K+LQE+T K++VLG+GSMRD+ KEEELR
Sbjct: 130 KLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRK 189
Query: 602 VIRP*VLSSS*RSHVEISAIAPPAXGSRXELHMHLAEVKKXLSAGIXXETXMEXXIXXIX 781
P + HV I PP H + EVKK L + + E +
Sbjct: 190 GGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHA-MEEVKKFLVPDMMDDICQEQFLELSY 248
Query: 782 XSGECTP 802
+G P
Sbjct: 249 LNGVPEP 255
>DQ323998-1|ABC88600.1| 333|Homo sapiens QKI protein.
Length = 333
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>BC019917-1|AAH19917.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>BC012222-1|AAH12222.1| 293|Homo sapiens QKI protein protein.
Length = 293
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 35 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 91
>AY780788-1|AAV98358.1| 313|Homo sapiens quaking isoform protein.
Length = 313
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 79 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 135
>AL356119-3|CAI23024.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AL356119-2|CAI23023.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AL356119-1|CAI23022.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AL031781-3|CAI21653.1| 325|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 325
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AL031781-2|CAI21652.1| 319|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 319
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AL031781-1|CAI21651.1| 341|Homo sapiens quaking homolog, KH domain
RNA binding (mouse) protein.
Length = 341
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AK027309-1|BAB55032.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ14403 fis, clone HEMBA1003805, highly similar to
Mus musculus KH domain RNA binding protein QKI-5A mRNA.
).
Length = 323
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 65 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 121
>AF142422-1|AAF63417.1| 341|Homo sapiens QUAKING isoform 3 protein.
Length = 341
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 105 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 161
>AF142421-1|AAF63416.1| 337|Homo sapiens QUAKING isoform 5 protein.
Length = 337
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 79 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 135
>AF142420-1|AAF63415.1| 315|Homo sapiens QUAKING isoform 4 protein.
Length = 315
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 79 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 135
>AF142419-1|AAF63414.1| 363|Homo sapiens QUAKING isoform 6 protein.
Length = 363
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 105 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 161
>AF142418-1|AAF63413.1| 347|Homo sapiens QUAKING isoform 2 protein.
Length = 347
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 105 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 161
>AF142417-1|AAF63412.1| 321|Homo sapiens QUAKING isoform 1 protein.
Length = 321
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 79 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 135
>AB067808-1|BAB69681.1| 325|Homo sapiens RNA binding protein HQK
protein.
Length = 325
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AB067801-1|BAB69499.1| 319|Homo sapiens RNA binding protein HQK-7B
protein.
Length = 319
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AB067800-1|BAB69498.1| 325|Homo sapiens RNA binding protein HQK-7
protein.
Length = 325
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AB067799-1|BAB69497.1| 319|Homo sapiens RNA binding protein HQK-6
protein.
Length = 319
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>AB067798-1|BAB69496.1| 341|Homo sapiens RNA binding protein HQK-5
protein.
Length = 341
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +2
Query: 428 QLKFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598
Q K VP+KE+P FNFVG++LGP+G T KQL+ +T CK+ V G+GSMRD++KEE+ R
Sbjct: 83 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1
protein.
Length = 571
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 264 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 310
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>AJ000051-1|CAA03883.1| 295|Homo sapiens splicing factor SF1
protein.
Length = 295
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574
K ++P E+P+ NFVG L+GP+GNT+K ++++ K+ + G+GS+++
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 185
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAV 550
VP+K NFVG+L+G +G +K++++DT K+ +
Sbjct: 277 VPLKTLAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAV 550
VP+K NFVG+L+G +G +K++++DT K+ +
Sbjct: 138 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITI 173
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAV 550
VP+K NFVG+L+G +G +K++++DT K+ +
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 35.1 bits (77), Expect = 0.33
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAV 550
+P+K NFVG+L+G +G +K++++DT K+ +
Sbjct: 277 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITI 312
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 35.1 bits (77), Expect = 0.33
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAV 550
+P+K NFVG+L+G +G +K++++DT K+ +
Sbjct: 277 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITI 312
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 35.1 bits (77), Expect = 0.33
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAV 550
+P+K NFVG+L+G +G +K++++DT K+ +
Sbjct: 277 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITI 312
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 35.1 bits (77), Expect = 0.33
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAV 550
+P+K NFVG+L+G +G +K++++DT K+ +
Sbjct: 277 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITI 312
>BC011788-1|AAH11788.1| 411|Homo sapiens PRPF40A protein protein.
Length = 411
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 192 TQGKPEELDQNGEEGIKIN--EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQAS 365
T K EE Q ++ N E+A + +ELL EK +N+ + +MK+I + + A
Sbjct: 331 TPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIIND-PRYSAL 389
Query: 366 GRITKDSKYVDVFRVQTNQ 422
++++ + + ++VQT +
Sbjct: 390 AKLSEKKQAFNAYKVQTKK 408
>AK024810-1|BAB15016.1| 323|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21157 fis, clone CAS09937. ).
Length = 323
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 192 TQGKPEELDQNGEEGIKIN--EKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQAS 365
T K EE Q ++ N E+A + +ELL EK +N+ + +MK+I + + A
Sbjct: 242 TPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIIND-PRYSAL 300
Query: 366 GRITKDSKYVDVFRVQTNQ 422
++++ + + ++VQT +
Sbjct: 301 AKLSEKKQAFNAYKVQTEK 319
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,733,188
Number of Sequences: 237096
Number of extensions: 1764342
Number of successful extensions: 7221
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 7096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7206
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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