BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_D23 (858 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna bin... 79 4e-15 AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 79 4e-15 AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna bin... 79 4e-15 AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 76 4e-14 AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 76 4e-14 Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical pr... 72 5e-13 U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. 72 5e-13 AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 59 3e-09 Z99281-18|CAD56258.1| 380|Caenorhabditis elegans Hypothetical p... 55 6e-08 AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical ... 52 4e-07 AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 52 5e-07 AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 52 5e-07 U10438-13|ABB88243.1| 235|Caenorhabditis elegans Hypothetical p... 51 9e-07 Z77132-1|CAB00859.1| 278|Caenorhabditis elegans Hypothetical pr... 37 0.021 Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 31 1.1 Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 31 1.1 Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 31 1.1 U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 2.4 AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 2.4 AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 2.4 Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 29 4.2 AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 4.2 U80453-5|AAK31443.1| 378|Caenorhabditis elegans Hypothetical pr... 28 9.8 >AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna binding protein) familyprotein 2, isoform a protein. Length = 328 Score = 79.0 bits (186), Expect = 4e-15 Identities = 33/52 (63%), Positives = 43/52 (82%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEE 589 K VP KEHP +NFVG++LGP+G T KQL+++T CK+ V GRGSMRD++KEE Sbjct: 91 KVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEE 142 >AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna binding protein) familyprotein 2, isoform c protein. Length = 445 Score = 79.0 bits (186), Expect = 4e-15 Identities = 33/52 (63%), Positives = 43/52 (82%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEE 589 K VP KEHP +NFVG++LGP+G T KQL+++T CK+ V GRGSMRD++KEE Sbjct: 133 KVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEE 184 >AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna binding protein) familyprotein 2, isoform b protein. Length = 403 Score = 79.0 bits (186), Expect = 4e-15 Identities = 33/52 (63%), Positives = 43/52 (82%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEE 589 K VP KEHP +NFVG++LGP+G T KQL+++T CK+ V GRGSMRD++KEE Sbjct: 91 KVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEE 142 >AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical protein E02D9.1b protein. Length = 315 Score = 75.8 bits (178), Expect = 4e-14 Identities = 37/78 (47%), Positives = 49/78 (62%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613 K LVPI HP FNF+GK+LGPKG T++ L + C + +LGRGS +DR+KE EL P Sbjct: 132 KILVPIYRHPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDP 191 Query: 614 *VLSSS*RSHVEISAIAP 667 S HV++ +AP Sbjct: 192 QHAHFSGPLHVKVETVAP 209 >AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical protein E02D9.1c protein. Length = 317 Score = 75.8 bits (178), Expect = 4e-14 Identities = 37/78 (47%), Positives = 49/78 (62%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRXVIRP 613 K LVPI HP FNF+GK+LGPKG T++ L + C + +LGRGS +DR+KE EL P Sbjct: 132 KILVPIYRHPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDP 191 Query: 614 *VLSSS*RSHVEISAIAP 667 S HV++ +AP Sbjct: 192 QHAHFSGPLHVKVETVAP 209 >Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical protein T23G11.3 protein. Length = 463 Score = 72.1 bits (169), Expect = 5e-13 Identities = 31/55 (56%), Positives = 41/55 (74%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598 K VP E+P +NFVG++LGP+G T KQL++DT CK+ V G+GSMRD+ KE R Sbjct: 208 KIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR 262 >U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. Length = 463 Score = 72.1 bits (169), Expect = 5e-13 Identities = 31/55 (56%), Positives = 41/55 (74%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598 K VP E+P +NFVG++LGP+G T KQL++DT CK+ V G+GSMRD+ KE R Sbjct: 208 KIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR 262 >AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical protein Y69A2AR.32a protein. Length = 384 Score = 59.3 bits (137), Expect = 3e-09 Identities = 22/42 (52%), Positives = 37/42 (88%) Frame = +2 Query: 440 LVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGS 565 +VP++++PK+NFVG++LGP+G T+KQL+++T C++ V GR S Sbjct: 76 MVPVEKYPKYNFVGRILGPRGMTVKQLEKETGCRIFVRGRAS 117 >Z99281-18|CAD56258.1| 380|Caenorhabditis elegans Hypothetical protein Y57G11C.36 protein. Length = 380 Score = 55.2 bits (127), Expect = 6e-08 Identities = 21/40 (52%), Positives = 32/40 (80%) Frame = +2 Query: 440 LVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGR 559 +VP+++ P +NFVG+LLGP+G T KQL+ T C++ +LGR Sbjct: 117 MVPVEKFPDYNFVGRLLGPRGTTAKQLEVTTGCRITILGR 156 >AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical protein K07H8.9 protein. Length = 254 Score = 52.4 bits (120), Expect = 4e-07 Identities = 17/41 (41%), Positives = 32/41 (78%) Frame = +2 Query: 443 VPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGS 565 +P++ +P +NF+G+++GP+G T KQL++DT C++ + G S Sbjct: 127 IPVETYPTYNFIGRIIGPRGTTAKQLEKDTGCRIMIRGNHS 167 >AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical protein Y116A8C.32 protein. Length = 699 Score = 52.0 bits (119), Expect = 5e-07 Identities = 20/47 (42%), Positives = 34/47 (72%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574 K +P ++ P NFVG L+GP+GNT+K L+ +T K+ + G+GS+++ Sbjct: 306 KVWIPQEQFPDLNFVGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352 >AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein protein. Length = 699 Score = 52.0 bits (119), Expect = 5e-07 Identities = 20/47 (42%), Positives = 34/47 (72%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 574 K +P ++ P NFVG L+GP+GNT+K L+ +T K+ + G+GS+++ Sbjct: 306 KVWIPQEQFPDLNFVGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352 >U10438-13|ABB88243.1| 235|Caenorhabditis elegans Hypothetical protein B0280.17 protein. Length = 235 Score = 51.2 bits (117), Expect = 9e-07 Identities = 23/55 (41%), Positives = 35/55 (63%) Frame = +2 Query: 434 KFLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598 K P + N VG+L+GP+G T++QL++D CK+ + G+G +D KEE LR Sbjct: 117 KVFFPPETANNTNPVGRLIGPRGMTIRQLEKDLGCKLFIRGKGCTKDDAKEERLR 171 >Z77132-1|CAB00859.1| 278|Caenorhabditis elegans Hypothetical protein F54D1.1 protein. Length = 278 Score = 36.7 bits (81), Expect = 0.021 Identities = 13/45 (28%), Positives = 28/45 (62%) Frame = +2 Query: 464 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELR 598 K N++G++LGP G + + ++ + + G GS+R++ +E +R Sbjct: 151 KCNYIGRILGPSGMSARMIENQYDVTLLIRGAGSVRNKAMDERVR 195 >Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical protein C12D8.1c protein. Length = 548 Score = 31.1 bits (67), Expect = 1.1 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +2 Query: 470 NFVGKLLGPKGNTMKQLQEDTLCKM-AVLGRGSMRDRQK 583 N G ++G G+T++QLQE + CKM V S+ D+ K Sbjct: 101 NRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSK 139 >Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical protein C12D8.1b protein. Length = 611 Score = 31.1 bits (67), Expect = 1.1 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +2 Query: 470 NFVGKLLGPKGNTMKQLQEDTLCKM-AVLGRGSMRDRQK 583 N G ++G G+T++QLQE + CKM V S+ D+ K Sbjct: 164 NRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSK 202 >Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical protein C12D8.1a protein. Length = 589 Score = 31.1 bits (67), Expect = 1.1 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +2 Query: 470 NFVGKLLGPKGNTMKQLQEDTLCKM-AVLGRGSMRDRQK 583 N G ++G G+T++QLQE + CKM V S+ D+ K Sbjct: 142 NRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSK 180 >U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. Length = 415 Score = 29.9 bits (64), Expect = 2.4 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = +2 Query: 476 VGKLLGPKGNTMKQLQEDT 532 VG ++GPKG T+K++Q+DT Sbjct: 148 VGLVVGPKGATIKRIQQDT 166 >AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess protein 3, isoform a protein. Length = 415 Score = 29.9 bits (64), Expect = 2.4 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = +2 Query: 476 VGKLLGPKGNTMKQLQEDT 532 VG ++GPKG T+K++Q+DT Sbjct: 148 VGLVVGPKGATIKRIQQDT 166 >AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess protein 3, isoform b protein. Length = 443 Score = 29.9 bits (64), Expect = 2.4 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = +2 Query: 476 VGKLLGPKGNTMKQLQEDT 532 VG ++GPKG T+K++Q+DT Sbjct: 176 VGLVVGPKGATIKRIQQDT 194 >Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical protein C14B1.6 protein. Length = 793 Score = 29.1 bits (62), Expect = 4.2 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 570 LIEPLPSTAILHSVSSCNCFIVFPF 496 L+EP+ I H V CNC++ PF Sbjct: 746 LLEPIYRAYINHFVDECNCYLKGPF 770 >AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome regulatory particle,non-atpase-like protein 1 protein. Length = 981 Score = 29.1 bits (62), Expect = 4.2 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +3 Query: 189 TTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQAS 365 TTQ P+E D+ + K+ EKA E+ E KL L +L + + T + S Sbjct: 4 TTQQTPKEADKKKADDKKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPS 62 >U80453-5|AAK31443.1| 378|Caenorhabditis elegans Hypothetical protein C23H3.3 protein. Length = 378 Score = 27.9 bits (59), Expect = 9.8 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = +2 Query: 473 FVGKLLGPKGNTMKQLQEDTLCKM 544 F+GKL+G T+ L+ +T C++ Sbjct: 111 FIGKLIGTNRRTLNSLENETQCRV 134 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,745,640 Number of Sequences: 27780 Number of extensions: 300806 Number of successful extensions: 692 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 682 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 692 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2139963672 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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