Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D22
(844 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 263 9e-71
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 260 8e-70
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 260 8e-70
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 258 3e-69
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 258 3e-69
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 258 3e-69
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 257 8e-69
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 256 1e-68
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 256 2e-68
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 132 3e-31
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 132 3e-31
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 131 6e-31
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 131 6e-31
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 130 1e-30
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 129 3e-30
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 129 3e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 108 4e-24
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 108 5e-24
At4g37190.1 68417.m05265 expressed protein 31 0.96
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.9
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 29 5.1
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 29 5.1
At2g45490.1 68415.m05658 protein kinase, putative contains prote... 28 6.8
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 8.9
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 263 bits (645), Expect = 9e-71
Identities = 114/133 (85%), Positives = 128/133 (96%), Gaps = 1/133 (0%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 270
M EI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 271 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 450
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 451 VRKEAESCDCLQG 489
VRKEAE+CDCLQG
Sbjct: 121 VRKEAENCDCLQG 133
Score = 113 bits (272), Expect = 1e-25
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
Query: 734 TLNYPHP 754
TL P
Sbjct: 215 TLKLSTP 221
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KLSTP++GDLNHL+S TMSGVT LR PG N+DL
Sbjct: 217 KLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDL 251
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 260 bits (637), Expect = 8e-70
Identities = 113/132 (85%), Positives = 126/132 (95%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M EI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 453
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 454 RKEAESCDCLQG 489
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 113 bits (272), Expect = 1e-25
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 734 TLNYPHP 754
TL P
Sbjct: 214 TLKLTTP 220
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KL+TP++GDLNHL+S TMSGVT CLR PG N+DL
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 250
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 260 bits (637), Expect = 8e-70
Identities = 115/133 (86%), Positives = 126/133 (94%), Gaps = 1/133 (0%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 270
M EI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 271 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 450
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 451 VRKEAESCDCLQG 489
VRKEAE+CDCLQG
Sbjct: 121 VRKEAENCDCLQG 133
Score = 113 bits (272), Expect = 1e-25
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
Query: 734 TLNYPHP 754
TL P
Sbjct: 215 TLKLSTP 221
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KLSTP++GDLNHL+S TMSGVT LR PG N+DL
Sbjct: 217 KLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDL 251
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 258 bits (633), Expect = 3e-69
Identities = 115/132 (87%), Positives = 124/132 (93%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M EI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 453
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 454 RKEAESCDCLQG 489
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 115 bits (276), Expect = 5e-26
Identities = 53/67 (79%), Positives = 57/67 (85%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 734 TLNYPHP 754
TL +P
Sbjct: 214 TLKLANP 220
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KL+ PT+GDLNHL+S TMSGVT CLR PG N+DL
Sbjct: 216 KLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDL 250
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 258 bits (632), Expect = 3e-69
Identities = 113/132 (85%), Positives = 124/132 (93%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M EI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 453
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 454 RKEAESCDCLQG 489
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 113 bits (272), Expect = 1e-25
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 734 TLNYPHP 754
TL P
Sbjct: 214 TLKLTTP 220
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KL+TP++GDLNHL+S TMSGVT CLR PG N+DL
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 250
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 258 bits (632), Expect = 3e-69
Identities = 113/132 (85%), Positives = 124/132 (93%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M EI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 453
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 454 RKEAESCDCLQG 489
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 113 bits (272), Expect = 1e-25
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 734 TLNYPHP 754
TL P
Sbjct: 214 TLKLTTP 220
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KL+TP++GDLNHL+S TMSGVT CLR PG N+DL
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 250
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 257 bits (629), Expect = 8e-69
Identities = 115/132 (87%), Positives = 124/132 (93%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M EI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 453
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 454 RKEAESCDCLQG 489
RKEAE+ DCLQG
Sbjct: 121 RKEAENSDCLQG 132
Score = 115 bits (276), Expect = 5e-26
Identities = 53/67 (79%), Positives = 57/67 (85%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 734 TLNYPHP 754
TL +P
Sbjct: 214 TLKLANP 220
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KL+ PT+GDLNHL+S TMSGVT CLR PG N+DL
Sbjct: 216 KLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDL 250
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 256 bits (627), Expect = 1e-68
Identities = 112/132 (84%), Positives = 125/132 (94%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M EI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 453
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 454 RKEAESCDCLQG 489
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 113 bits (273), Expect = 1e-25
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 734 TLNYPHP 754
TL P
Sbjct: 214 TLKLSTP 220
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KLSTP++GDLNHL+S TMSGVT CLR PG N+DL
Sbjct: 216 KLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 250
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 256 bits (626), Expect = 2e-68
Identities = 111/132 (84%), Positives = 124/132 (93%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M EI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 453
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 454 RKEAESCDCLQG 489
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 113 bits (272), Expect = 1e-25
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 734 TLNYPHP 754
TL P
Sbjct: 214 TLKLTTP 220
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 739 KLSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
KL+TP++GDLNHL+S TMSGVT CLR PG N+DL
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 250
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 132 bits (319), Expect = 3e-31
Identities = 61/134 (45%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 267
M EI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 447
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 448 VVRKEAESCDCLQG 489
VRK A++C LQG
Sbjct: 121 RVRKLADNCTGLQG 134
Score = 67.7 bits (158), Expect = 9e-12
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 734 TLNYPHP 754
+L+ P
Sbjct: 216 SLDIERP 222
Score = 35.1 bits (77), Expect = 0.059
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 742 LSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
+ PTY +LN L+S +S +TT LR G N D+
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDI 252
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 132 bits (319), Expect = 3e-31
Identities = 61/134 (45%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 267
M EI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 447
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 448 VVRKEAESCDCLQG 489
VRK A++C LQG
Sbjct: 121 RVRKLADNCTGLQG 134
Score = 67.7 bits (158), Expect = 9e-12
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 734 TLNYPHP 754
+L+ P
Sbjct: 216 SLDIERP 222
Score = 35.1 bits (77), Expect = 0.059
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 742 LSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
+ PTY +LN L+S +S +TT LR G N D+
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDI 252
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 131 bits (316), Expect = 6e-31
Identities = 86/255 (33%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 267
M E + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 447
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 448 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGH 627
+RK A++C LQG G L +R + T+ S
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLG---SLLLERLSVDYGKKSKLGFTVYPSPQV 177
Query: 628 SSRTVQRH-TFSSSIS*KHRRNLLYRQRGSLXYLLPHAKLS--TPTYGDLNHLVSLTMSG 798
S+ V+ + + S+ S ++ Y + LS PTY +LN LVS +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISS 237
Query: 799 VTTCLRXPGXXNADL 843
+T LR G N D+
Sbjct: 238 LTASLRFDGALNVDV 252
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 734 TLNYPHP 754
+L+ P
Sbjct: 216 SLSIERP 222
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 131 bits (316), Expect = 6e-31
Identities = 86/255 (33%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 267
M E + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 447
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 448 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGH 627
+RK A++C LQG G L +R + T+ S
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLG---SLLLERLSVDYGKKSKLGFTVYPSPQV 177
Query: 628 SSRTVQRH-TFSSSIS*KHRRNLLYRQRGSLXYLLPHAKLS--TPTYGDLNHLVSLTMSG 798
S+ V+ + + S+ S ++ Y + LS PTY +LN LVS +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISS 237
Query: 799 VTTCLRXPGXXNADL 843
+T LR G N D+
Sbjct: 238 LTASLRFDGALNVDV 252
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 734 TLNYPHP 754
+L+ P
Sbjct: 216 SLSIERP 222
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 130 bits (314), Expect = 1e-30
Identities = 59/134 (44%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 267
M EI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 447
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 448 VVRKEAESCDCLQG 489
+RK A++C LQG
Sbjct: 121 RLRKLADNCTGLQG 134
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +2
Query: 593 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFRTLNYPHP 754
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+Y IC R+L+ P
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERP 222
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 742 LSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
+ PTY +LN L+S T+S +TT LR G N D+
Sbjct: 219 IERPTYSNLNRLISQTISSLTTSLRFDGAINVDI 252
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 129 bits (311), Expect = 3e-30
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 267
M E + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 447
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 448 VVRKEAESCDCLQG 489
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 734 TLNYPHP 754
+LN P
Sbjct: 216 SLNIERP 222
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 742 LSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
+ PTY +LN LVS +S +T LR G N D+
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 252
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 129 bits (311), Expect = 3e-30
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 267
M E + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 447
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 448 VVRKEAESCDCLQG 489
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +2
Query: 554 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 734 TLNYPHP 754
+LN P
Sbjct: 216 SLNIERP 222
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 742 LSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
+ PTY +LN LVS +S +T LR G N D+
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 252
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 108 bits (260), Expect = 4e-24
Identities = 48/132 (36%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Frame = +1
Query: 100 EIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 279
EI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+PR
Sbjct: 4 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPR 63
Query: 280 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 453
A+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++
Sbjct: 64 ALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMI 122
Query: 454 RKEAESCDCLQG 489
+EA+ D L+G
Sbjct: 123 DREADGSDSLEG 134
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 557 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVE 216
Query: 734 TLNYPHP 754
L+ +P
Sbjct: 217 RLHLTNP 223
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +1
Query: 742 LSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
L+ PT+ N LVS MS TT LR PG N DL
Sbjct: 220 LTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 108 bits (259), Expect = 5e-24
Identities = 48/132 (36%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Frame = +1
Query: 100 EIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 279
EI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+PR
Sbjct: 4 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPR 63
Query: 280 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 453
A+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++
Sbjct: 64 ALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMI 122
Query: 454 RKEAESCDCLQG 489
+EA+ D L+G
Sbjct: 123 DREADGSDSLEG 134
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 557 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYXICFR 733
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVE 216
Query: 734 TLNYPHP 754
L+ +P
Sbjct: 217 RLHLTNP 223
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +1
Query: 742 LSTPTYGDLNHLVSLTMSGVTTCLRXPGXXNADL 843
L+ PT+ N LVS MS TT LR PG N DL
Sbjct: 220 LTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.1 bits (67), Expect = 0.96
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +1
Query: 94 MGEIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 261
M EIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 262 GKYVPRAILVDLEP--GTMDS 318
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 427 LVDSVLDVVRKEAESCDCLQ 486
+++SV VVRKEAE+C+CLQ
Sbjct: 1 MINSV-GVVRKEAENCNCLQ 19
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -2
Query: 399 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 232
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 231 ALQLQVRVPMVGTG 190
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -2
Query: 399 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 232
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 231 ALQLQVRVPMVGTG 190
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At2g45490.1 68415.m05658 protein kinase, putative contains protein
kinase domain, Pfam:PF00069; similar to protein kinase
p46XlEg22 [Xenopus laevis] gi|609280|emb|CAA78914
Length = 288
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 665 QLVENTDETYCIDNEALYXICFRTLNYPHP 754
++VEN D Y +DN L +C+ L Y +P
Sbjct: 187 EMVENRDHDYAVDNWTLGILCYEFL-YGNP 215
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -2
Query: 264 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 85
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,213,261
Number of Sequences: 28952
Number of extensions: 353012
Number of successful extensions: 1071
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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