Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D21
(860 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein. 122 2e-27
AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein. 122 2e-27
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein. 122 2e-27
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein. 122 2e-27
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 31 5.4
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 31 5.4
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 31 5.4
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 31 5.4
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 31 5.4
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 31 5.4
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 31 5.4
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 31 5.4
AK097971-1|BAC05207.1| 344|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 31 5.4
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 31 5.4
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 31 5.4
BC019319-1|AAH19319.1| 190|Homo sapiens RNA binding motif prote... 30 9.4
BC008942-1|AAH08942.1| 190|Homo sapiens RNA binding motif prote... 30 9.4
AL162424-7|CAI14706.1| 190|Homo sapiens RNA binding motif prote... 30 9.4
>AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein.
Length = 614
Score = 122 bits (294), Expect = 2e-27
Identities = 58/94 (61%), Positives = 68/94 (72%)
Frame = +2
Query: 35 ARPPSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETE 214
A+ PSPPR K SNI+ I+NLVRPFTL QLK LL RTG + E FWIDKIKS C+V Y T
Sbjct: 273 AQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTV 332
Query: 215 DQAVETRHALHGVTWPVSNPKTLHVDFSTTEAFD 316
++AV TR ALHGV WP SNPK L D++ + D
Sbjct: 333 EEAVATRTALHGVKWPQSNPKFLCADYAEQDELD 366
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 628 KNKTTPCIYWLPLSAETIAIKEEQR 702
K K PCIYWLPL+ I KE +R
Sbjct: 490 KTKAAPCIYWLPLTDSQIVQKEAER 514
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/84 (30%), Positives = 34/84 (40%)
Frame = +2
Query: 386 LREQDLKREAEVEKSWERKGTMREWDVGKNXXXXXXXXXXXXXXPSEKRRHRTPERSXXX 565
+REQ +RE E+E+ ER + REWD K ++RR +
Sbjct: 415 VREQWAEREREMERR-ERTRSEREWDRDK-----VREGPRSRSRSRDRRRKERAKSKEKK 468
Query: 566 XXXXXXXXXXXXXXLLDDLFRKTK 637
LLDDLFRKTK
Sbjct: 469 SEKKEKAQEEPPAKLLDDLFRKTK 492
>AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein.
Length = 583
Score = 122 bits (294), Expect = 2e-27
Identities = 58/94 (61%), Positives = 68/94 (72%)
Frame = +2
Query: 35 ARPPSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETE 214
A+ PSPPR K SNI+ I+NLVRPFTL QLK LL RTG + E FWIDKIKS C+V Y T
Sbjct: 242 AQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTV 301
Query: 215 DQAVETRHALHGVTWPVSNPKTLHVDFSTTEAFD 316
++AV TR ALHGV WP SNPK L D++ + D
Sbjct: 302 EEAVATRTALHGVKWPQSNPKFLCADYAEQDELD 335
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 628 KNKTTPCIYWLPLSAETIAIKEEQR 702
K K PCIYWLPL+ I KE +R
Sbjct: 459 KTKAAPCIYWLPLTDSQIVQKEAER 483
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/84 (30%), Positives = 34/84 (40%)
Frame = +2
Query: 386 LREQDLKREAEVEKSWERKGTMREWDVGKNXXXXXXXXXXXXXXPSEKRRHRTPERSXXX 565
+REQ +RE E+E+ ER + REWD K ++RR +
Sbjct: 384 VREQWAEREREMERR-ERTRSEREWDRDK-----VREGPRSRSRSRDRRRKERAKSKEKK 437
Query: 566 XXXXXXXXXXXXXXLLDDLFRKTK 637
LLDDLFRKTK
Sbjct: 438 SEKKEKAQEEPPAKLLDDLFRKTK 461
>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
Length = 1341
Score = 122 bits (294), Expect = 2e-27
Identities = 58/94 (61%), Positives = 68/94 (72%)
Frame = +2
Query: 35 ARPPSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETE 214
A+ PSPPR K SNI+ I+NLVRPFTL QLK LL RTG + E FWIDKIKS C+V Y T
Sbjct: 1000 AQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTV 1059
Query: 215 DQAVETRHALHGVTWPVSNPKTLHVDFSTTEAFD 316
++AV TR ALHGV WP SNPK L D++ + D
Sbjct: 1060 EEAVATRTALHGVKWPQSNPKFLCADYAEQDELD 1093
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 628 KNKTTPCIYWLPLSAETIAIKEEQR 702
K K PCIYWLPL+ I KE +R
Sbjct: 1217 KTKAAPCIYWLPLTDSQIVQKEAER 1241
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/84 (30%), Positives = 34/84 (40%)
Frame = +2
Query: 386 LREQDLKREAEVEKSWERKGTMREWDVGKNXXXXXXXXXXXXXXPSEKRRHRTPERSXXX 565
+REQ +RE E+E+ ER + REWD K ++RR +
Sbjct: 1142 VREQWAEREREMERR-ERTRSEREWDRDK-----VREGPRSRSRSRDRRRKERAKSKEKK 1195
Query: 566 XXXXXXXXXXXXXXLLDDLFRKTK 637
LLDDLFRKTK
Sbjct: 1196 SEKKEKAQEEPPAKLLDDLFRKTK 1219
>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
Length = 1286
Score = 122 bits (294), Expect = 2e-27
Identities = 58/94 (61%), Positives = 68/94 (72%)
Frame = +2
Query: 35 ARPPSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETE 214
A+ PSPPR K SNI+ I+NLVRPFTL QLK LL RTG + E FWIDKIKS C+V Y T
Sbjct: 945 AQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTV 1004
Query: 215 DQAVETRHALHGVTWPVSNPKTLHVDFSTTEAFD 316
++AV TR ALHGV WP SNPK L D++ + D
Sbjct: 1005 EEAVATRTALHGVKWPQSNPKFLCADYAEQDELD 1038
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 628 KNKTTPCIYWLPLSAETIAIKEEQR 702
K K PCIYWLPL+ I KE +R
Sbjct: 1162 KTKAAPCIYWLPLTDSQIVQKEAER 1186
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/84 (30%), Positives = 34/84 (40%)
Frame = +2
Query: 386 LREQDLKREAEVEKSWERKGTMREWDVGKNXXXXXXXXXXXXXXPSEKRRHRTPERSXXX 565
+REQ +RE E+E+ ER + REWD K ++RR +
Sbjct: 1087 VREQWAEREREMERR-ERTRSEREWDRDK-----VREGPRSRSRSRDRRRKERAKSKEKK 1140
Query: 566 XXXXXXXXXXXXXXLLDDLFRKTK 637
LLDDLFRKTK
Sbjct: 1141 SEKKEKAQEEPPAKLLDDLFRKTK 1164
>BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein.
Length = 410
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 177 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 232
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 233 VKAMEEMNG 241
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 365 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 420
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 421 VKAMEEMNG 429
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 384
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 385 VKAMEEMNG 393
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 384
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 385 VKAMEEMNG 393
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 384
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 385 VKAMEEMNG 393
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 384
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 385 VKAMEEMNG 393
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 384
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 385 VKAMEEMNG 393
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 384
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 385 VKAMEEMNG 393
>AK097971-1|BAC05207.1| 344|Homo sapiens protein ( Homo sapiens
cDNA FLJ40652 fis, clone THYMU2018639. ).
Length = 344
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 422 PLLPLFSDLAPEANPQLFLELPKVEHSLLPH-WIMLCQMLLLLKSPHVKSLDLI 264
PLL FS PQL L LPKVE +P W +LC + SP SL I
Sbjct: 67 PLLQAFST----TGPQLSLLLPKVESPKVPSVWPILCPPPVASSSPPPLSLSAI 116
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 384
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 385 VKAMEEMNG 393
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 329 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 384
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 385 VKAMEEMNG 393
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 44 PSPPRHKQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKIKSKCYVKYETEDQA 223
P P + +LF+ NL T L+ + G++E + K+K ++ ++ D A
Sbjct: 301 PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----VKKLKDYAFIHFDERDGA 356
Query: 224 VETRHALHG 250
V+ ++G
Sbjct: 357 VKAMEEMNG 365
>BC019319-1|AAH19319.1| 190|Homo sapiens RNA binding motif protein
18 protein.
Length = 190
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +2
Query: 62 KQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKI-------KSKCYVKYETEDQ 220
++ + L+I NL T L LLQ+ G++++ F K + C+V +ET+ +
Sbjct: 22 QEGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQE 81
Query: 221 AVETRHALHG 250
A + L+G
Sbjct: 82 AEQAIQCLNG 91
>BC008942-1|AAH08942.1| 190|Homo sapiens RNA binding motif protein
18 protein.
Length = 190
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +2
Query: 62 KQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKI-------KSKCYVKYETEDQ 220
++ + L+I NL T L LLQ+ G++++ F K + C+V +ET+ +
Sbjct: 22 QEGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQE 81
Query: 221 AVETRHALHG 250
A + L+G
Sbjct: 82 AEQAIQCLNG 91
>AL162424-7|CAI14706.1| 190|Homo sapiens RNA binding motif protein
18 protein.
Length = 190
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +2
Query: 62 KQSNILFITNLVRPFTLLQLKNLLQRTGRIEENGFWIDKI-------KSKCYVKYETEDQ 220
++ + L+I NL T L LLQ+ G++++ F K + C+V +ET+ +
Sbjct: 22 QEGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQE 81
Query: 221 AVETRHALHG 250
A + L+G
Sbjct: 82 AEQAIQCLNG 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,083,946
Number of Sequences: 237096
Number of extensions: 2237610
Number of successful extensions: 4545
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4542
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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