Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D21
         (860 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   3.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   3.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   8.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.4  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 291 TFQQQKHLTKHYPVRKQRVLHLRQFQEQLRI 383
           T + Q   T H  + K R  HLR   E+L++
Sbjct: 43  TKKSQGSRTTHNELEKNRRAHLRNCLEKLKV 73


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 272 DLIQAMSPHARHVLFQQLDLQFHISHS 192
           DLI+A+    RH   +++  + H+SH+
Sbjct: 72  DLIKAIIDSDRHSTTREIAEKLHVSHT 98


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 60  TNSQIYSLSPI*SGHLHYCNSKTYCKELAG 149
           TN+  YS  P+ S  L+Y N+K + K   G
Sbjct: 263 TNNLYYS--PLSSRSLYYVNTKPFMKSEYG 290


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 54   QGTNSQIYSLSPI*SGHLHYCNSKTYCKEL 143
            Q   SQIY +     GH + C   T  +++
Sbjct: 1052 QAEASQIYDMLVYEGGHFYVCGDCTMAEDV 1081


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,793
Number of Sequences: 438
Number of extensions: 4104
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)