Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D18
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 33 0.25
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 33 0.25
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 33 0.33
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 33 0.33
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.58
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 31 0.77
AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical ... 31 0.77
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 31 1.3
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 31 1.3
Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA ... 30 1.8
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 30 2.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 3.1
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 5.4
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 5.4
U41557-4|AAA83305.1| 298|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 7.2
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 7.2
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 28 7.2
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 28 9.5
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 28 9.5
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 28 9.5
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 9.5
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 28 9.5
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 524 TRRRSPTVSLSCSNSQSSTALANRPATTLTRNLX---AKCSTTARTASSTPGSARTVHIP 694
T PT + + + S S+T + + TT+T STT +T +STP S +T
Sbjct: 518 TTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTH 577
Query: 695 PXAP 706
AP
Sbjct: 578 VGAP 581
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 524 TRRRSPTVSLSCSNSQSSTALANRPATTLTRNLX---AKCSTTARTASSTPGSARTVHIP 694
T PT + + + S S+T + + TT+T STT +T +STP S +T
Sbjct: 359 TTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTH 418
Query: 695 PXAP 706
AP
Sbjct: 419 VGAP 422
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 524 TRRRSPTVSLSCSNSQSSTALANRPATTLTRNLX---AKCSTTARTASSTPGSARTVHIP 694
T PT + + + S S+T + + TT+T STT +T +STP S +T
Sbjct: 399 TTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTH 458
Query: 695 PXAP 706
AP
Sbjct: 459 VGAP 462
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 536 SPTVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSARTVHIPPXAPD 709
S + S SN ++++ A RPAT L A ST A A++T G PD
Sbjct: 166 SASSEASTSNGVATSSSARRPATAKRDTLAAPTSTAAAAAAATAGGTPAAGAEEQLPD 223
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 536 SPTVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSARTVHIPPXAPD 709
S + S SN ++++ A RPAT L A ST A A++T G PD
Sbjct: 166 SASSEASTSNGVATSSSARRPATAKRDTLAAPTSTAAAAAAATAGGTPAAGAEEQLPD 223
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -2
Query: 298 AERCMQSACKHADEDSLFPPDPEPVHRCLPPLPRQVYCLPHPKPSPLRP 152
A R S C + L PP P P C P P C P P P+P P
Sbjct: 73 APRPSPSCCPYVPPAPL-PPPPPPASPCCGPSPVPAPCCP-PPPAPAAP 119
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 536 SPTVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSARTVHIPPXAPDL 712
SP+ S S S S S++ +R +T+T + +TTA + ++ A T P++
Sbjct: 96 SPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTTTATSTPTSSSKATTTSAQITQPEI 154
>AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical
protein H27M09.5 protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 202 PRQVYCLPHPKPSPLRPAKVLRENSTSFPLSRTEKLSVK 86
P+ Y LP PS +P K + N + PLS +K S K
Sbjct: 239 PKSYYSLPPTSPSKEKPTKKISRNYLADPLSPGDKKSAK 277
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +2
Query: 539 PTVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSARTVHIPPXAPDLHA 718
P+ + S + + ++T P TT + ST+ T + S T H P + +L
Sbjct: 158 PSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTTTETPTTSEATTHEPTASTELPP 217
Query: 719 XDXXN 733
D N
Sbjct: 218 PDAPN 222
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +2
Query: 539 PTVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSARTVHIPPXAPDLHA 718
P+ + S + + ++T P TT + ST+ T + S T H P + +L
Sbjct: 108 PSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTTTETPTTSEATTHEPTASTELPP 167
Query: 719 XDXXN 733
D N
Sbjct: 168 PDAPN 172
>Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 271 KHADEDSLFPPDPEPVHRCLPPL-PRQVYCLPHP 173
+H +F PEP+ L PL R C+PHP
Sbjct: 76 EHPTSSYIFTKGPEPIRHVLIPLFARNELCVPHP 109
>Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 271 KHADEDSLFPPDPEPVHRCLPPL-PRQVYCLPHP 173
+H +F PEP+ L PL R C+PHP
Sbjct: 76 EHPTSSYIFTKGPEPIRHVLIPLFARNELCVPHP 109
>AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA
binding protein SYM-2 protein.
Length = 618
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 271 KHADEDSLFPPDPEPVHRCLPPL-PRQVYCLPHP 173
+H +F PEP+ L PL R C+PHP
Sbjct: 76 EHPTSSYIFTKGPEPIRHVLIPLFARNELCVPHP 109
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 577 NCVGKQTGYYADEELXC-EVFHYCQDSVKHSWICP 678
NCVG+ +G YA ++ C E ++ C + + + CP
Sbjct: 111 NCVGRLSGDYALDKTVCNENYYQCANGISYMRKCP 145
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = -2
Query: 217 CLPPLPRQVYCLPHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTDF-CIRQKAREM 41
C PP P C P P P P P + S + V N ++D C ++ RE+
Sbjct: 39 CAPPPPPMCGCAPPPPPPP--PPPMCGCGCGRKKRSVDDVEGVINMDSDVECNNEELREV 96
Query: 40 TETRQRLTKRDS 5
E + T DS
Sbjct: 97 LENNMKSTPSDS 108
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 542 TVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTP 667
T + + S +ST P TT T STT+ T ++TP
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 542 TVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSARTVH 688
T + + S+S SST +N +T+ T+A + SSTP + T +
Sbjct: 444 TATSTSSSSDSSTQSSNAQTSTIENGSTTTNFTSAPSTSSTPATPTTTY 492
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 241 PDPEPVHRCLPPLPRQVYCLPHPKPSPLRP 152
P P P + LP +P++V P P+P+ + P
Sbjct: 263 PPPPPPNIPLPTIPQEVQSPPSPRPTSVPP 292
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 241 PDPEPVHRCLPPLPRQVYCLPHPKPSPLRP 152
P P P + LP +P++V P P+P+ + P
Sbjct: 263 PPPPPPNIPLPTIPQEVQSPPSPRPTSVPP 292
>U41557-4|AAA83305.1| 298|Caenorhabditis elegans Hypothetical
protein C50F7.9 protein.
Length = 298
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 305 ASVQHLPWLNWLGTNNGHNSRS 370
+S Q++ WLNWL NN H S
Sbjct: 87 SSKQYILWLNWLVDNNEHMCNS 108
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 536 SPTVSLSCSNSQSSTALANRPATTL--TRNLXAKCSTTARTASSTPGSARTVHIPP 697
S T S + S + ST + P TT + STT T SST R IPP
Sbjct: 873 STTASSTGSTTSESTTSSTEPPTTQEESNTTTTLSSTTPFTTSSTESFTRGGFIPP 928
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSP 161
PP P+PV+R P P+ V P P PSP
Sbjct: 487 PPSPQPVYRL--PSPKPV--TPEPLPSP 510
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 238 DPEPVHRCLPPLPRQVYCLPHPKPSPLRP 152
DP P PP P+ VY LP PKP P
Sbjct: 481 DPTPTP---PPSPQPVYRLPSPKPVTPEP 506
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSPLRPAKVLRENSTSFPLSRTEKLS 92
PP P P+ PP + LP P PSP + T P+ T S
Sbjct: 582 PPTPAPI---TPPKSQSPPALPSPSPSPHGASGAAHAPVTESPIKSTSTAS 629
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 166 MASDEEDSIPDVGVEEDSDELALDQEE 246
M +EE+ + G +ED DE+ +D EE
Sbjct: 35 MEDEEEEMEENEGDDEDEDEMVMDDEE 61
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -2
Query: 295 ERCMQSA--CKHADEDSLFPPDPEPVHRCLPPLPRQVYCLPHPKPSP 161
++C + A CK +L P P P R LPP P P PSP
Sbjct: 212 QQCQKIADLCKPTPAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAPSP 258
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -2
Query: 295 ERCMQSA--CKHADEDSLFPPDPEPVHRCLPPLPRQVYCLPHPKPSP 161
++C + A CK +L P P P R LPP P P PSP
Sbjct: 210 QQCQKIADLCKPTPAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAPSP 256
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 232 EPVHRCLPPLPRQVYCLPHPKPSPLRPAKVLRENSTSFPLSR 107
E V + +PP P +V + PKPS +P +V N T+ P ++
Sbjct: 434 EVVKKSVPPKPVEVKKVETPKPS--QPPQVKPTNHTAVPATK 473
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 244 PPDPEPVHRC-LPPLPRQVYCLPHPKPSP 161
PP PEP+ C PP P Q LP P P P
Sbjct: 27 PPCPEPMPVCATPPCPPQYAPLP-PPPMP 54
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 154 VGVAMASDEEDSIPDVGVE--EDSDELALDQEETRNLRPRAYTPTAYNALPS 303
+G++ SDE IP +G+E +DS + +E + ++P T A P+
Sbjct: 859 LGLSQKSDESGEIPGLGMEKLDDSVKEKEKEEMMKKIKPAESTTPTVKASPA 910
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 521 KTRRRSPTVSLSCSNSQSS-TALANRPATTLTRNLXAKCSTTARTASSTPGSARTVHIPP 697
K+ +PT + ++ ++ T + + P T T TT T STP + T+ P
Sbjct: 384 KSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSP 443
Query: 698 XAP 706
P
Sbjct: 444 TTP 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,932,784
Number of Sequences: 27780
Number of extensions: 325643
Number of successful extensions: 1597
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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