Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D18
(839 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 33 0.18
At5g22560.1 68418.m02635 hypothetical protein contains Pfam prof... 33 0.24
At5g38190.1 68418.m04602 myosin heavy chain-related 32 0.55
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 32 0.55
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.95
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t... 31 0.95
At5g42905.1 68418.m05230 hypothetical protein 31 1.3
At4g32330.2 68417.m04600 expressed protein 31 1.3
At4g32330.1 68417.m04599 expressed protein 31 1.3
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 30 1.7
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 30 2.2
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 2.9
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 3.8
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 29 3.8
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 29 3.8
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 5.1
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 5.1
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 5.1
At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase fa... 29 5.1
At1g53370.1 68414.m06050 F-box family protein contains F-box dom... 29 5.1
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 29 5.1
At1g17060.1 68414.m02075 cytochrome P450, putative 41% identical... 29 5.1
At1g01530.1 68414.m00069 MADS-box protein (AGL28) similar to MAD... 29 5.1
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 28 6.7
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 6.7
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 28 6.7
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 28 6.7
At5g64400.1 68418.m08090 expressed protein contains Pfam domain,... 28 8.9
At4g03070.1 68417.m00415 2-oxoglutarate-dependent dioxygenase (A... 28 8.9
At3g58600.1 68416.m06531 expressed protein hypothetical protein ... 28 8.9
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 28 8.9
At1g32010.1 68414.m03938 myosin heavy chain-related 28 8.9
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 284 HTTLCPAASVQHLPWLNWLGTNNGHNSRSSKNTSYL 391
HT++C +SVQ +PW W G++ +NS N +++
Sbjct: 147 HTSIC--SSVQFIPWRPWEGSDTNNNSGQCLNPAFV 180
>At5g22560.1 68418.m02635 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 517
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Frame = -2
Query: 337 PVQPGKVLDGSRWAE-----RCMQSACKHADEDSLFPPDPEPVHRCLPPLPRQVYCLPHP 173
P QP K +G RW RC ++ P P+ PPLP L P
Sbjct: 261 PSQPKKA-EGERWTNMFCGSRCFNMLSPWKNKVQRETSTPPPIETKTPPLPPPPPTLTQP 319
Query: 172 KPSPLRP 152
P PL P
Sbjct: 320 HPKPLTP 326
>At5g38190.1 68418.m04602 myosin heavy chain-related
Length = 969
Score = 31.9 bits (69), Expect = 0.55
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = -2
Query: 262 DEDSLFPPDPEPVHRCLPPLPRQVYCLPHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKN 83
D + + P E + P +QV CL H K + +P K +++S +R +K+S +N
Sbjct: 270 DRNLVEDPSAETLREQAPIDWKQVPCLKHKKQNKRKPQK--QKSS-----ARPKKMSGEN 322
Query: 82 YNTDFCIRQK-AREMTETRQRLTKRDSS 2
N +R+K AR+ E++ RL D +
Sbjct: 323 VNLATLMREKRARKEAESKPRLAIVDKT 350
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = -2
Query: 253 SLFPPDPEPVHRCLPPLPRQVYCLPHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNT 74
SL PP P P PP P Y P P P P S PL + +KN+ T
Sbjct: 77 SLPPPSPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPPPPLHFSSPLIKKVYPVIKNFQT 136
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKP 167
PP P PVH PP P Y P P P
Sbjct: 661 PPPPPPVHYSSPPPPEVHYHSPPPSP 686
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 241 PDPEPVHRCLPPLPRQVYCLPHPKPSPL 158
P P PVH PP P C P P+P+
Sbjct: 682 PPPSPVHYSSPPPPPSAPCEESPPPAPV 709
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSP 161
PP P PV+ PP P VY P P PSP
Sbjct: 503 PPPPPPVYS--PP-PPPVYSSPPPPPSP 527
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = -2
Query: 250 LFPPDPEPVHRCLPP----LPRQVYCLPHPKPSPLRP 152
++ P P PV+ PP P VYC P P P P
Sbjct: 509 VYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSP 545
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKP 167
PP P VH PP P Y P P P
Sbjct: 630 PPPPPVVHYSSPPPPPVYYSSPPPPP 655
>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 161
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 274 CKHADEDSLFP-PDPEPVHRCLPPLPRQVYCLPHPKPSPLRPAKVLRENSTSFPL 113
CK + + P P P+PV +C PP PR +P P P P+ P + + S P+
Sbjct: 30 CKPSPKPKPVPSPKPKPV-QCPPP-PRP--SVPSPNPRPVTPPRTPGSSGNSCPI 80
>At5g42905.1 68418.m05230 hypothetical protein
Length = 258
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 239 RRKQGIFVRVLTRRLHTTLCPAASVQHLPW 328
RR+QG F + L L+ LC +S + +PW
Sbjct: 48 RRQQGFFSKSLFEWLYDNLCDRSSCEDIPW 77
>At4g32330.2 68417.m04600 expressed protein
Length = 436
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -2
Query: 232 EPVHRCLPPLPRQVYCLPHPKPSPLR----PAKVLRE 134
+PV + LP LP Q LP KP+P + PAKV E
Sbjct: 338 QPVRKSLPRLPSQKTVLPDGKPAPAKAAIIPAKVRPE 374
>At4g32330.1 68417.m04599 expressed protein
Length = 437
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -2
Query: 232 EPVHRCLPPLPRQVYCLPHPKPSPLR----PAKVLRE 134
+PV + LP LP Q LP KP+P + PAKV E
Sbjct: 339 QPVRKSLPRLPSQKTVLPDGKPAPAKAAIIPAKVRPE 375
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 250 LFPPDPEPVHRCLPPLPRQVYCLPHPKPSP 161
++PP P P PP P VY P P P P
Sbjct: 424 VYPPPPPPYVYPPPPSPPYVYPPPPPSPQP 453
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSPLRP 152
PP P P PP P Y P P P P P
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPPPSP 420
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 241 PDPEPVHRCLPPLPRQVYCLPHPKPSPLRP 152
P+PEP PP P C P P P P P
Sbjct: 52 PEPEPEPADCPPPPPPPPCPPPPSPPPCPP 81
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = -2
Query: 244 PPDPEPVHRCLPPL---PRQVYCLPHPKPSPLRP 152
PP P PVH PP+ P VY P P SP P
Sbjct: 559 PPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPP 592
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSPLRP 152
PP P V PP P+ PHPKP ++P
Sbjct: 54 PPKPPAVK---PPTPKPPTVKPHPKPPTVKP 81
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 277 ACKHADEDSLFPPDPEPVHRCLPPLPRQVYCLPHPKPSPLRP 152
A K ++ PP P+P + P P+ PHPKP ++P
Sbjct: 51 AVKPPKPPAVKPPTPKPP--TVKPHPKPPTVKPHPKPPTVKP 90
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 148 KVLRENSTSFPLSRTEKLSVKNYNTDFCIRQK-AREMTETRQRLTKRDSS 2
K RE+S S P SRT KL +TD R ++ RL+ DSS
Sbjct: 700 KKSRESSPSTPTSRTRKLLNMRKSTDVSERDSLTQKFLSVNARLSSADSS 749
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 253 SLFPPDPE-PVHRCLPPLPRQVYCLPHPKPSPLRP 152
+L PP P P+ R LPP P LP P PS P
Sbjct: 544 ALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQYP 578
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2
Query: 235 PEPVHRCLPPLPRQVYCLPHPKPSPLRPAKVLRENSTSFPLSRTEK 98
P P R P PR+ P P P K +NSTS P+S +K
Sbjct: 161 PRPPTRPKSPPPRKSSFPPSRSPPPPPAKKNASKNSTSAPVSPAKK 206
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2
Query: 235 PEPVHRCLPPLPRQVYCLPHPKPSPLRPAKVLRENSTSFPLSRTEK 98
P P R P PR+ P P P K +NSTS P+S +K
Sbjct: 161 PRPPTRPKSPPPRKSSFPPSRSPPPPPAKKNASKNSTSAPVSPAKK 206
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -2
Query: 244 PPDPEPVHRCLPP-LPRQVYCLPHPKPSPL 158
P P P H LPP P Y P P P+P+
Sbjct: 713 PQPPPPPHYSLPPPTPTYHYISPPPPPTPI 742
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSP 161
PP P P H PP P VY P P P
Sbjct: 769 PPPPSPAHYSPPPSP-PVYYYNSPPPPP 795
>At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 4
WD-40 repeats (PF00400);similar to SP:Q01968 Inositol
polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.-)(Lowe's
oculocerebrorenal syndrome protein) (SP:Q01968) [Homo
sapiens]
Length = 1144
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 524 TRRRSPTVSLS-CSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSAR 679
TR S ++ + CS++ S +L + TT+T+NL ST +T ++ GS R
Sbjct: 1084 TRTISHSIKVRHCSSAAKSLSLVHSKTTTMTKNLEG--STRYQTDANRGGSTR 1134
>At1g53370.1 68414.m06050 F-box family protein contains F-box domain
Pfam:PF00646
Length = 355
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 574 FNCVGKQTGYYADEELXCE--VFHYCQDSVKHSW 669
FNC GK + D + E VFH +D+ KH W
Sbjct: 245 FNCKGKLGVHQYDVQSRNEKLVFHVLEDAEKHKW 278
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSPLRPAKV 143
PP+P+P PP P+ V C PKP P V
Sbjct: 82 PPEPKPAP---PPAPKPVPCPSPPKPPAPTPKPV 112
>At1g17060.1 68414.m02075 cytochrome P450, putative 41% identical to
Cytochrome P450 [Catharanthus roseus] (gi|404690)
Length = 476
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 194 LTWEWRKTAMNWLWIRRKQ 250
L W WR A+NW+W+R K+
Sbjct: 20 LNWVWR--AVNWVWLRPKR 36
>At1g01530.1 68414.m00069 MADS-box protein (AGL28) similar to
MADS-box transcription factor GI:6580943 from [Picea
abies]; contains Pfam profile PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain)
Length = 247
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -2
Query: 196 QVYCLPHPKPSPLRP---AKVLRENSTSFPLSRTE-KLSVKNYNTDFCIRQKAREMTETR 29
+ Y HP + L +V+R N+T+F SRT+ ++ + N + + +K +E ET+
Sbjct: 58 KAYSFGHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQ-ETK 116
Query: 28 QRLTKRD 8
Q + + +
Sbjct: 117 QSIVQNE 123
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSPLRPA 149
PP P+P PP P+ PKP P +PA
Sbjct: 28 PPKPKPAPAPTPPKPKPTPAPTPPKPKP-KPA 58
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSPLRPA 149
PP P+P PP P+ PKP P +PA
Sbjct: 61 PPKPKPAPAPTPPKPKPAPAPTPPKPKP-KPA 91
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -2
Query: 268 HADEDSLFPPDPEPVHRCLPPL---PRQVYCLPHPKPSPLRPAKV 143
H+ ++ P P PVH PP+ P V+ P P SP P V
Sbjct: 578 HSPPPPVYSPPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPPV 622
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 244 PPDPEPVHRCLPPLPRQVYCLPHPKPSPLRPAKV 143
PP P PV+ PP P VY P P P P V
Sbjct: 518 PPPPPPVYS--PPPPPPVYSPPPPPPVHSPPPPV 549
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 530 RRSPTVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSARTVHIPPXAP 706
RRSP+VS S S S S + + P+ +++R+ + +R+ SS+ +R+V +P
Sbjct: 8 RRSPSVSGSSSRSSSRSRSGSSPSRSISRS-----RSRSRSLSSSSSPSRSVSSGSRSP 61
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 530 RRSPTVSLSCSNSQSSTALANRPATTLTRNLXAKCSTTARTASSTPGSARTVHIPPXAP 706
RRSP+VS S S S S + + P+ +++R+ + +R+ SS+ +R+V +P
Sbjct: 8 RRSPSVSGSSSRSSSRSRSGSSPSRSISRS-----RSRSRSLSSSSSPSRSVSSGSRSP 61
>At5g64400.1 68418.m08090 expressed protein contains Pfam domain,
PF04933: Protein of unknown function (DUF657)
Length = 144
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 241 PDPEPVHRCLPPLPRQ 194
P P+PVHR PP P Q
Sbjct: 22 PAPQPVHRAPPPAPAQ 37
>At4g03070.1 68417.m00415 2-oxoglutarate-dependent dioxygenase
(AOP1.2) identical to GI:16118887; contains PF03171:
2OG-Fe(II) oxygenase superfamily domain
Length = 322
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 187 SIPDVGVEEDSDELALDQEETRNLRPRAYT 276
SIP GV DS E +D+E R +P YT
Sbjct: 269 SIPKTGVIIDSPEELVDKEHPRIFKPFEYT 298
>At3g58600.1 68416.m06531 expressed protein hypothetical protein
F21M11.17 - Arabidopsis thaliana, EMBL:AC003027
Length = 302
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = -2
Query: 184 LPHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTDFCIRQKAREMTETRQRLTKRD 8
LP P P PL P +++ +S P S + + S + + D ++ E E ++ L +D
Sbjct: 229 LPPPPPGPLSPVTTAQKSPSSLPPSLSLQRSSEQQDLD---TKREEEEEEKKEDLKAKD 284
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 256 DSLFPPDPEPVHRCLPPLPRQVYCLPHPKP 167
+ L PP P P H+ PP P P P P
Sbjct: 227 NGLPPPPPPPPHQAQPPPPPPSGLFPPPPP 256
>At1g32010.1 68414.m03938 myosin heavy chain-related
Length = 835
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 199 RQVYCLPHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTDFCIRQK-AREMTETRQR 23
+QV CL H K + +P K +R +K+S +N N +R+K AR+ E++ R
Sbjct: 319 KQVPCLKHKKQNKRKPQK---------SSARPKKMSGENVNLATLMREKRARKEAESKAR 369
Query: 22 LTKRDSS 2
L D +
Sbjct: 370 LAIVDKT 376
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,988,908
Number of Sequences: 28952
Number of extensions: 302523
Number of successful extensions: 1568
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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