Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D17
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -2

Query: 693 QDHIVFVSGFSRTSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLE 532
           ++ I  VSG    +L D       ++ + A   +SPF S   S N   T S LE
Sbjct: 206 EERISVVSGLHEATLTDLALGENYTVQIMAKSESSPFESLKKSLN-FRTPSCLE 258


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 374 CPDILH*KYSEKESFLPSTM 433
           CP+  +  Y+++  ++PSTM
Sbjct: 606 CPEGFNEFYNQRRRWMPSTM 625


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 374 CPDILH*KYSEKESFLPSTM 433
           CP+  +  Y+++  ++PSTM
Sbjct: 839 CPEGFNEFYNQRRRWMPSTM 858


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 374 CPDILH*KYSEKESFLPSTM 433
           CP+  +  Y+++  ++PSTM
Sbjct: 839 CPEGFNEFYNQRRRWMPSTM 858


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 632 FAHSSANEVLEKPDTKTMWSCYXSQAT 712
           F  +S++  LE PD  +  SC  S  +
Sbjct: 219 FPTTSSSSALESPDPASRSSCLGSNTS 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,714
Number of Sequences: 336
Number of extensions: 4080
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)