Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D16
(855 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55803| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_22269| Best HMM Match : Metallothionein (HMM E-Value=0.89) 36 0.042
SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2) 36 0.042
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 35 0.073
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.097
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 35 0.097
SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 34 0.17
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 33 0.30
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39) 31 0.90
SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_13431| Best HMM Match : Seryl_tRNA_N (HMM E-Value=2.3) 30 2.1
SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_26728| Best HMM Match : Disintegrin (HMM E-Value=1.9e-23) 30 2.8
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 29 3.6
SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) 29 3.6
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 29 3.6
SB_3276| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062) 29 4.8
SB_59527| Best HMM Match : DUF382 (HMM E-Value=4.1e-26) 29 4.8
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_14905| Best HMM Match : GIY-YIG (HMM E-Value=5.7) 29 4.8
SB_8281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_2622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_47374| Best HMM Match : RAMP (HMM E-Value=7.4) 29 6.4
SB_14853| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 6.4
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_34463| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_38320| Best HMM Match : SSDP (HMM E-Value=0.34) 28 8.4
SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074) 28 8.4
>SB_55803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 39.1 bits (87), Expect = 0.005
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 424 TLQITRHHNIVRHN---NTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNN 594
+L T HN RHN NT+R +S +T TT L+ T + T HN SL+N
Sbjct: 35 SLHNTTRHNTTRHNSLHNTTRHNSLNSTTRH--NTTRHNSLNSTTRHNTTRHN---SLHN 89
Query: 595 STKLSHNIKPSLSRNTNHN 651
+TK + SL T HN
Sbjct: 90 TTKHNTTRHNSLHNTTRHN 108
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 433 ITRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHN--RDISLNNSTKL 606
IT HN + HN T TT + + T + R LHN R SLN++T+
Sbjct: 11 ITTRHNSL-HNTTRHNSLHNTTRHNSLHNT----TRHNTTRHNSLHNTTRHNSLNSTTRH 65
Query: 607 SHNIKPSLSRNTNHN 651
+ SL+ T HN
Sbjct: 66 NTTRHNSLNSTTRHN 80
>SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Frame = +1
Query: 442 HHNIVRHNNTSRKHSPVTTAASPMKTTDSTIL-------SYTNKRTTQLHNRDISLNNST 600
H+N +NN S H+ TT + KTT +T+L S N HN + + NN+
Sbjct: 204 HNNNNSNNNNSNDHTATTTTPT-AKTTPATVLVQQNINSSNNNNDQNNDHNNNNNNNNNN 262
Query: 601 KLSHNIKPSLSRNTNHNLNTS 663
+HNI S N+N+N N +
Sbjct: 263 YNNHNINHS-HNNSNNNKNNN 282
>SB_22269| Best HMM Match : Metallothionein (HMM E-Value=0.89)
Length = 251
Score = 35.9 bits (79), Expect = 0.042
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Frame = +1
Query: 436 TRH---HNIVRHN---NTSRKHS-PVTTAASPMKTTDSTILSYTNKRTTQLHN--RDISL 588
TRH HN RHN NT+R +S P TT + + T + R LHN R SL
Sbjct: 131 TRHNSLHNTTRHNSLHNTTRHNSLPNTTRHNSLHNTTRHNSLHNTTRHNSLHNTTRHNSL 190
Query: 589 NNSTKLSHNIKPSLSRNTNHNLNTS 663
N+T+ HN P+ +R+ N NT+
Sbjct: 191 PNTTR--HNSLPNTTRH-NSLTNTT 212
>SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2)
Length = 474
Score = 35.9 bits (79), Expect = 0.042
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 418 DTTLQITRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLH----NRDIS 585
+T L+ T+HH V HN +R+H+ T S + +T ++ TQ H RD
Sbjct: 36 NTRLRNTQHHEHVTHNYVTREHATSRTRDSRTRNIANT---QPHEHATQKHATSRTRDSQ 92
Query: 586 LNNSTKLSHNIKPSLSRNTNHN 651
L NS + N+ + RNT H+
Sbjct: 93 LWNSR--TRNVTNTRLRNTQHH 112
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 35.1 bits (77), Expect = 0.073
Identities = 37/147 (25%), Positives = 63/147 (42%)
Frame = +1
Query: 205 APLTNKKTASTLKKKPTLRATGKAATHISIRVARGRQ*TTSPAKMDSKPLAITFXXXXXX 384
+P T++KT+ +K +L A+ K + S++ + TSP M K L +
Sbjct: 65 SPKTSRKTSKKTSQKTSLNASRKTSRRTSLKRSLKTSPKTSPKTMRMKSLKTS------- 117
Query: 385 XXXXXXXXXXXDTTLQITRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQ 564
T+ +I + + TS K SP ++ + KT+ T L T+++T+
Sbjct: 118 ----------PKTSPEIGPRTSPKTSSKTSPKTSPKSSPKTSPKTSSKTSLK-TSQKTSL 166
Query: 565 LHNRDISLNNSTKLSHNIKPSLSRNTN 645
+R S S K S P SR T+
Sbjct: 167 NASRKTSRRTSLKRSLKTSPKTSRKTS 193
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 34.7 bits (76), Expect = 0.097
Identities = 15/71 (21%), Positives = 38/71 (53%)
Frame = +1
Query: 457 RHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 636
+HNN S ++ + + + +++S S N + N + + N+++ + N +++
Sbjct: 108 QHNNNSNSNNNINSNRNSNSSSNSNSNSNNNSNSNNNINSNSNSNSNSNSNSNSNNNINS 167
Query: 637 NTNHNLNTSLN 669
N+N N+N++ N
Sbjct: 168 NSNSNINSNSN 178
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 34.7 bits (76), Expect = 0.097
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +1
Query: 442 HHNIVRHNNTSRKHS-PVTTAASPM-KTTDSTILSYTN---KRTTQLHNRDISLNNSTKL 606
H R +++ S P TT A P+ KTT +T TN K TT +++ + NNS
Sbjct: 3088 HKKSTRPTTDNKQQSQPQTTTAEPITKTTSTTAKPTTNNNSKPTTNNNSKPTTNNNSKPT 3147
Query: 607 SHNIKPSLSRNTNHNLNTS 663
++N + N NLN +
Sbjct: 3148 TNNNSKPTTNNKKVNLNNT 3166
>SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1249
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 460 HNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRN 639
+NN + ++ + TT++ S N TT +N S NN+ + N + S N
Sbjct: 29 NNNNNNNNNNNNNNNNNNTTTNNNSNSSNNNNTTTNNNNSNSSNNNNNNNKNNNNNNSNN 88
Query: 640 TNHNLNTSLN 669
N+N NT+ N
Sbjct: 89 NNNNSNTNNN 98
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 445 HNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKP 624
+N +NN S +S + + ++ + N TT +N + S NN+T ++N
Sbjct: 11 NNNNNNNNNSSSNSS-SNNNNNNNNNNNNNNNNNNNNTTTNNNSNSSNNNNTTTNNNNSN 69
Query: 625 SLSRNTNHNLNTSLN 669
S + N N+N N + N
Sbjct: 70 SSNNNNNNNKNNNNN 84
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +1
Query: 442 HHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIK 621
++N +NN + ++ T S ++T + N ++ +N + NN+ ++N
Sbjct: 32 NNNNNNNNNNNNNNNTTTNNNSNSSNNNNTTTNNNNSNSSNNNNNNNKNNNNNNSNNNNN 91
Query: 622 PSLSRNTNHNLNTSLN 669
S + N N N + + N
Sbjct: 92 NSNTNNNNSNNSNNNN 107
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/76 (19%), Positives = 38/76 (50%)
Frame = +1
Query: 442 HHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIK 621
++N +NN + ++ TT + + ++ + N + +N + + NN+ S+N
Sbjct: 31 NNNNNNNNNNNNNNNNTTTNNNSNSSNNNNTTTNNNNSNSSNNNNNNNKNNNNNNSNNNN 90
Query: 622 PSLSRNTNHNLNTSLN 669
+ + N N++ N++ N
Sbjct: 91 NNSNTNNNNSNNSNNN 106
>SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +1
Query: 442 HHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIK 621
H+N ++N+ + K + + +S K +D+ ++ N N+D + NN +N
Sbjct: 25 HNNSDKNNSNNNKRN--SKDSSNNKASDNNSINGNNNNNKSNDNKDSNNNNDRNKKNNNN 82
Query: 622 PSLSRNTNHNLNTSLN 669
+ S N N+N N + N
Sbjct: 83 NNNSNNNNNNNNRNQN 98
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 460 HNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRN 639
+NN++ +S + +S +ST S +N T +N + NNST S+N + + +
Sbjct: 121 NNNSNNNNSTSNSNSSTRNNNNST--SNSNNSTRNNNNSTSNSNNSTSNSNNSTSNSNNS 178
Query: 640 TNHNLNTS 663
+N+N +TS
Sbjct: 179 SNNNNSTS 186
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/76 (23%), Positives = 44/76 (57%)
Frame = +1
Query: 442 HHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIK 621
++N ++N S +++ +T+ S T++S + + ++ +N + NNST S+N
Sbjct: 140 NNNSTSNSNNSTRNNNNSTSNSNNSTSNSNNSTSNSNNSSNNNNSTSNSNNSTSNSNNST 199
Query: 622 PSLSRNTNHNLNTSLN 669
+ + ++N+N N+++N
Sbjct: 200 RNNNSSSNNN-NSTIN 214
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 33.1 bits (72), Expect = 0.30
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 3/154 (1%)
Frame = +1
Query: 214 TNKKTASTLKKKPTLRATGKAATHISIRVARGRQ*TTS---PAKMDSKPLAITFXXXXXX 384
T KT+ +K +L A+ K + S++ + TS K D K T
Sbjct: 96 TTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKRSPK 155
Query: 385 XXXXXXXXXXXDTTLQITRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQ 564
T+L+ + + NTSRK S T+ +KT+ T L TN T+
Sbjct: 156 TSSKSSPKTSPKTSLKTSSKTSPKTSLNTSRKTSRKTSLKRSLKTSTKTSLK-TNPTTSP 214
Query: 565 LHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSL 666
+ISL K S P S T +L TSL
Sbjct: 215 ----EISLKTRWKTSRKTSPKTSLKT--SLKTSL 242
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 469 TSRKHSPVTTAASPMKTTDSTILS---YTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRN 639
TSRK SP T+ + +KT+ T L T+ +T+ +R SL K S K SL +
Sbjct: 224 TSRKTSPKTSLKTSLKTSLKTSLKASLKTSLKTSLETSRKTSLKTGPKTS--TKTSLETS 281
Query: 640 TNHNLNTSL 666
L TSL
Sbjct: 282 LKTRLKTSL 290
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 469 TSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNH 648
T+ P TT + +T +TI+ + N+RT +NR+ + NN+ K + N RN N+
Sbjct: 70 TTTTEEPTTTTTTAAETP-TTIMRHNNRRTDN-NNRNNNNNNNNKRTDN----NYRNNNN 123
Query: 649 NLNTSLN 669
N T N
Sbjct: 124 NRRTDNN 130
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/76 (19%), Positives = 41/76 (53%)
Frame = +1
Query: 442 HHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIK 621
+++I+ +N+ + +S + ++ +++I + N + N + S+NN ++N
Sbjct: 1717 NNSIINNNSINNNNSSINNRSNNHNNNNNSINNCNNNNSINNRNNNNSINNRNNTNNNSI 1776
Query: 622 PSLSRNTNHNLNTSLN 669
+ + + N+N N+S+N
Sbjct: 1777 NNNNSSINNN-NSSIN 1791
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 439 RHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNI 618
R++N +N + ++ + S + +S+I N + + N + S+NN+ +N
Sbjct: 1759 RNNNNSINNRNNTNNNSINNNNSSINNNNSSI----NNNNSSIINNNSSINNNNSSINNN 1814
Query: 619 KPSLSRN--TNHNLNTSLN 669
S+ N +N+N N+S+N
Sbjct: 1815 NSSIINNNSSNNNNNSSIN 1833
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Frame = +1
Query: 433 ITRHHNIVRHNNTS--RKHSPVTTAASPMKTTDSTIL---SYTNKRTTQLHNRDIS--LN 591
I +++ + +NN+S +S + S + +S+I+ S N + ++N + S N
Sbjct: 1783 INNNNSSINNNNSSIINNNSSINNNNSSINNNNSSIINNNSSNNNNNSSINNNNSSIINN 1842
Query: 592 NSTKLSHNIKPSLSRNTNHN 651
NS+ +++N + NTN+N
Sbjct: 1843 NSSIINNNSSINNRNNTNNN 1862
>SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39)
Length = 1060
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 421 TTLQITRHHNIVRHNNTSRKH--SPVTTAASPMKTTDSTILSY-TNKRTTQLHNRDISLN 591
TT Q T H+I TS H +P TT+ + T +T + T +TT H+
Sbjct: 803 TTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQT 862
Query: 592 NSTKLSHNIKPSLSRNTNH 648
ST H+I + +T+H
Sbjct: 863 TST---HHITTPQTTSTHH 878
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 421 TTLQITRHHNIVRHNNTSRKH--SPVTTAASPMKTTDSTILSY-TNKRTTQLHNRDISLN 591
TT Q T H+I TS H +P TT+ + T +T + T +TT H+
Sbjct: 814 TTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQT 873
Query: 592 NSTKLSHNIKPSLSRNTNH 648
ST H+I + +T+H
Sbjct: 874 TST---HHITTPQTTSTHH 889
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 421 TTLQITRHHNIVRHNNTSRKH--SPVTTAASPMKTTDSTILSY-TNKRTTQLHNRDISLN 591
TT Q T H+I TS H +P TT+ + T +T + T +TT H+
Sbjct: 825 TTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQT 884
Query: 592 NSTKLSHNIKPSLSRNTNH 648
ST H+I + +T+H
Sbjct: 885 TST---HHITTPQTTSTHH 900
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 421 TTLQITRHHNIVRHNNTSRKH--SPVTTAASPMKTTDSTILSY-TNKRTTQLHNRDISLN 591
+T Q T H+I TS H +P TT+ + T +T + T +TT H+
Sbjct: 792 STPQTTGTHHITTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQTTSTHHITTPQT 851
Query: 592 NSTKLSHNIKPSLSRNTNH 648
ST H+I + +T+H
Sbjct: 852 TST---HHITTPQTTSTHH 867
>SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +1
Query: 421 TTLQIT---RHHNIVRHNNTSRKHSPVTT-AASPMKTTDSTILSYTNKRTTQLHNRD-IS 585
TTLQIT RH+ I + +H P +T P TTD YT+ T H D I+
Sbjct: 11 TTLQITLTTRHYTITLTTRSHSRHHPTSTFTVRPHNTTD-----YTHDTTLHDHTHDTIT 65
Query: 586 LNNSTKLSH 612
L H
Sbjct: 66 LTTPAHTLH 74
>SB_13431| Best HMM Match : Seryl_tRNA_N (HMM E-Value=2.3)
Length = 743
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 435 NLESCIEDRACSQE*ERQLEAQSECDRQRLGIHFCRRC 322
N C++DR C QE E + + + C+R+ L RC
Sbjct: 701 NASDCLDDRTCRQETEARPKFERCCERKHLRNVIVLRC 738
>SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +1
Query: 436 TRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHN 615
T+H ++ RH+ T H+ T M T + N T H+ +LN T+ +H+
Sbjct: 128 TQHAHLTRHSTTRALHTHTQTRTLNMHTQHAHSARTLNTLTQHAHS-TCTLNMHTQHAHS 186
Query: 616 IKPSLSRNTNHNLNT 660
+ +L+ T H +T
Sbjct: 187 AR-TLNTLTQHAHST 200
>SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 179 SCFLHYSRRFRIACVFGDTSGPFVLLARHGHY 84
+C + R RI + D + PF L ARHGH+
Sbjct: 673 NCAIGLPRGARIDAIDNDGNTPFSLAARHGHH 704
>SB_26728| Best HMM Match : Disintegrin (HMM E-Value=1.9e-23)
Length = 1531
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 457 RHNNTSRKHSPVTTAASPMKTTDSTILSYTNK 552
RHNN R+ P+ P D +IL Y NK
Sbjct: 1115 RHNNWRREQVPMRNQMRPSLNDDYSILQYANK 1146
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -1
Query: 711 VDWXLRLRLIXGAGVQAGIEVVVGIAAEAGLDIVAELGTVVEADISV 571
+D + + + G GV G+ V VG+ G+ + +G V+ D+ V
Sbjct: 1418 IDIDIDIDIDIGVGVGVGVGVGVGVGVGVGVGVGVGVGVDVDVDVDV 1464
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 678 GAGVQAGIEVVVGIAAEAGLDIVAELGTVVEADISV 571
G GV G+ V VG+ G+D+ ++ V+ D+ +
Sbjct: 1437 GVGVGVGVGVGVGVGVGVGVDVDVDVDVDVDVDVDI 1472
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 290 RSEWPEEDSELHRRQKW-IPSRWRSHSDCASSCRSYS 397
RS W E+++ R KW +PS RS SD +S + +S
Sbjct: 295 RSSWEEDENSTPSRSKWEMPSPARSISDYIASEKRHS 331
>SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12)
Length = 567
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 GYTPDPRY--NSPDYKAPQYSA-PQQYVSQAQPRNYGGKPNEDDGQYY 533
G+TPDPRY ++PD + ++ P+ + + PR +G + +YY
Sbjct: 515 GHTPDPRYYGHTPDPRYHGHTPDPRYHGNPPDPRYHGNPRYHEHPRYY 562
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 190 EMARLAPLTNKKTASTLKKKPTLRATGKAATHISIRVARGRQ*TTSPAKMDSKPLAI 360
E R P K +T+K++PT R T K + V + +P +KP I
Sbjct: 361 EEERATPRPTKAKPTTIKRRPTERPTKKPTKPLLPEVESAEEERATPGPTKAKPTTI 417
>SB_3276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 460 HNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPS 627
H N + TTA + TT + SY +N DIS NN +++I S
Sbjct: 21 HYNGYKTSVTTTTAITTTATTTTLANSYNTYNNDISYNNDISYNNDISYNNDINYS 76
>SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062)
Length = 238
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/79 (27%), Positives = 32/79 (40%)
Frame = +1
Query: 421 TTLQITRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNST 600
TT T+ TS K TT P TT +T + NK+ N + + N+S
Sbjct: 157 TTSTTTKTSKATTTTKTSVKAEATTT--KPEATTPTTTTTTNNKKADDDRNDEDNNNDSN 214
Query: 601 KLSHNIKPSLSRNTNHNLN 657
++N NTN + N
Sbjct: 215 HNNNNNNDYKDSNTNDSHN 233
>SB_59527| Best HMM Match : DUF382 (HMM E-Value=4.1e-26)
Length = 800
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 402 YTPDPRYNSPDYKAPQYSAPQQYVSQAQPR--NYGGKPNEDDGQYYPELYEQE 554
Y P Y +PQ + QY++ +P+ Y + QY P L E+E
Sbjct: 373 YIAPQETQEPQYISPQETQEPQYIAPQEPQEPQYIALQETQEQQYVPPLREEE 425
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 511 MKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSLN 669
M TT + + Y N +H+ + +T + + N +HN NT N
Sbjct: 1 MTTTTTALSRYVNNNNNNIHHNKTPMTTTTTALSRYVNNNNNNIHHNKNTDDN 53
>SB_14905| Best HMM Match : GIY-YIG (HMM E-Value=5.7)
Length = 373
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 127 TRLAPSCCWHDTATMTKADT 68
T P CCWH T+T T +T
Sbjct: 129 TPTGPHCCWHYTSTKTTRET 148
>SB_8281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -1
Query: 669 VQAGIEVVVGIAAEAGLDIVAELGTVVEADISVV 568
V G++V VG+ + G+D+ ++ V+ D+ VV
Sbjct: 26 VGVGVDVDVGVDVDVGVDVDVDVDVGVDVDVDVV 59
>SB_2622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +1
Query: 424 TLQITRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTK 603
TL T H IV H S + S V +A + T+ + N +N + + NN+
Sbjct: 3 TLLATDCHGIV-HIEVSVEVSNVLSAFGFIFLVSETLDNNNNNNNNNNNNNNNNNNNNNN 61
Query: 604 LSHNIKPSLSRNTNHNLNTSLN 669
++N + + N N+N N + N
Sbjct: 62 NNNNNNNNNNNNNNNNNNNNNN 83
>SB_47374| Best HMM Match : RAMP (HMM E-Value=7.4)
Length = 158
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 460 HNNTSRKHSPVTTAASPMKT-TDSTIL-SYTNKRTTQ 564
++ TS HSP T A PMKT T+S L S T+++ Q
Sbjct: 99 YSKTSSDHSPTTGAPLPMKTWTNSRCLPSLTDRKDEQ 135
>SB_14853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 436 TRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDI-SLNNSTKLSH 612
TRH + V + N K + V T+ ++ NKRT H + ++NN K +
Sbjct: 160 TRHTSGVGNMNNGNKRTKVLDNTQTRHTSGVGNMNNGNKRTKTRHTSGVDNMNNGNKRTK 219
Query: 613 NIKPSLSRNTN--HNLNTS 663
+ + +R+T+ N+N S
Sbjct: 220 VLCNTQTRHTSGVGNMNNS 238
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 445 HNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKP 624
H++ NTSR + + + T +T T R T +RD++L +T S +
Sbjct: 1044 HDVTLIRNTSRGVTLTCNTSRVVTLTCNTSRGVTLTRNT---SRDVALTCNT--SRGV-- 1096
Query: 625 SLSRNTNHNLNTSLN 669
+L+RNT+H + +LN
Sbjct: 1097 TLTRNTSHGVTLTLN 1111
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1
Query: 433 ITRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSH 612
I+ ++NI+ +NN+ ++ S + N + +N D NN+T ++
Sbjct: 215 ISDNNNIIDNNNSDNNNTSDNNNTSDNNNISDNNNTSDNNNISDNNNSD---NNNTSDNN 271
Query: 613 NIKP---SLSRNTNHNLNTSLN 669
NI S + NT+ N NTS N
Sbjct: 272 NISDNNNSDNNNTSDNNNTSDN 293
>SB_34463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 439 RHHNIVRHNNTSRKHSPVTTAA---SPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLS 609
+H ++H T+ +P TT A + TT + + + T TT N D + ++ +
Sbjct: 12 QHQRRLQHQTTTT--TPATTTALTTTTALTTTTALATNTAPTTTTTPNNDYNTSDDYSTN 69
Query: 610 HNIKPSLSRNTNHNLNT 660
++ S +TN + NT
Sbjct: 70 NDYSTSDDYSTNDDYNT 86
>SB_38320| Best HMM Match : SSDP (HMM E-Value=0.34)
Length = 273
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 433 ITRHHNIVRHNNTSRKHSPVTTAASPMKTT-DSTILSYTNKRTTQL--HNRDISLNNSTK 603
IT+ ++ + N + + S KTT ++T + T + TT NRD + NN++
Sbjct: 137 ITKRSLMILNGNAKKIFQNCKSTTSATKTTTETTAATITREATTVTTNSNRDNNRNNNSD 196
Query: 604 LSHNIKPSLSRNTNHN 651
++N + +N N +
Sbjct: 197 NNNNRSNNSDKNDNRS 212
>SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074)
Length = 996
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 317 ELHRRQKWIPSRWRSHSDCASSCRS-YSWLHARSSIQLSRL 436
EL RR+ W P + D SSC S S+ R+++Q R+
Sbjct: 723 ELLRRKYWFPRMNKRIEDIVSSCFSCQSYKRQRTTVQFHRI 763
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,117,229
Number of Sequences: 59808
Number of extensions: 436248
Number of successful extensions: 2679
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -