Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D16
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024790-3|AAF60637.1|  446|Caenorhabditis elegans Hypothetical ...    35   0.085
Z81129-4|CAB03405.1|  330|Caenorhabditis elegans Hypothetical pr...    33   0.34 
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    31   0.79 
AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical...    30   2.4  
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    30   2.4  
AC006659-2|AAF39883.2|  977|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z92828-5|CAB07332.2|  586|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U88168-5|AAM98000.1|  112|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF468834-1|AAL77082.1|  586|Caenorhabditis elegans PRY-1 protein.      29   4.2  
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical p...    29   5.6  
U50312-1|AAA92318.1|  285|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>AC024790-3|AAF60637.1|  446|Caenorhabditis elegans Hypothetical
           protein Y47D7A.6 protein.
          Length = 446

 Score = 34.7 bits (76), Expect = 0.085
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 405 TPDPRYNSPDYKAPQYSAPQQYVSQAQPRNYGGKPN 512
           TP     +P Y  P Y+AP++Y   + P +Y  KP+
Sbjct: 336 TPSSYDTTPSYSVPSYTAPKKYPVASPPSDYAQKPS 371


>Z81129-4|CAB03405.1|  330|Caenorhabditis elegans Hypothetical
           protein T23F1.6 protein.
          Length = 330

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 399 GYTPDPRYNSPD-YKAPQYSAPQQYVSQAQPRNYGGKPNEDDGQYYPELYEQEN 557
           G T +  YN+ D Y   QY    Q  +Q Q +N    PN+   QY    Y+ +N
Sbjct: 153 GSTGNMMYNNQDPYNQMQYGGYNQQGNQYQNQNQYQNPNQIQNQYNQNQYQNQN 206


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +3

Query: 408 PDPRYNSPDYKAPQYSAPQQYVSQAQPRNYGGKPNEDDGQY 530
           P P Y SP Y +P Y +P      A       KP +  G Y
Sbjct: 373 PSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQPSGGY 413



 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 408 PDPRYNSPDYKAPQYSAPQQYVSQAQPR-NYGGKP 509
           P P Y SP Y +P Y +P  Y S + P  +Y  +P
Sbjct: 363 PSPSYPSPSYPSPSYPSP-SYPSPSYPSPSYPAEP 396


>AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32b protein.
          Length = 216

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 87  VAVSCQQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFG 206
           V  +  +H G  R P+Y+ DP + +   + R L  +GA+G
Sbjct: 39  VTSTSNEHVGQFRRPRYSADPTSNSTDLQLRPLDAHGAYG 78


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 87  VAVSCQQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFG 206
           V  +  +H G  R P+Y+ DP + +   + R L  +GA+G
Sbjct: 207 VTSTSNEHVGQFRRPRYSADPTSNSTDLQLRPLDAHGAYG 246


>AC006659-2|AAF39883.2|  977|Caenorhabditis elegans Hypothetical
           protein H16O14.1 protein.
          Length = 977

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 481 HSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTK 603
           H  +  A + ++ TDS I  YT +RT ++  R+  L N  K
Sbjct: 775 HLRIDAAVNVIEMTDSDISDYTYERTMKMEERNQYLKNLNK 815


>Z92828-5|CAB07332.2|  586|Caenorhabditis elegans Hypothetical
           protein C37A5.9 protein.
          Length = 586

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +1

Query: 472 SRKHSPVTTAASPMKTTD---STILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNT 642
           S   SP   A  P K+ +   +T LS TN+   QLHN  I +        +   SL  + 
Sbjct: 352 STNRSPKGPAGEPNKSGEGSKNTTLSPTNRAPAQLHN-TIRVPRRKDYPRDTSASLKSHR 410

Query: 643 NHNLNTS 663
           +H ++T+
Sbjct: 411 HHQIDTN 417


>U88168-5|AAM98000.1|  112|Caenorhabditis elegans Hypothetical
           protein K11H12.8b protein.
          Length = 112

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 168 QEARYLSGNGAFGAAYQQEDGINFKEETDAEGNRKGS 278
           + ARY  G   FG+   Q  GI     T+AEG   G+
Sbjct: 28  KSARYGGGQSGFGSRVNQSSGIRSSHWTNAEGATFGT 64


>AF468834-1|AAL77082.1|  586|Caenorhabditis elegans PRY-1 protein.
          Length = 586

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +1

Query: 472 SRKHSPVTTAASPMKTTD---STILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNT 642
           S   SP   A  P K+ +   +T LS TN+   QLHN  I +        +   SL  + 
Sbjct: 352 STNRSPKGPAGEPNKSGEGSKNTTLSPTNRAPAQLHN-TIRVPRRKDYPRDTSASLKSHR 410

Query: 643 NHNLNTS 663
           +H ++T+
Sbjct: 411 HHQIDTN 417


>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
            F29D11.2 protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 538  SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 636
            S TNKR   L + DI+++N   +  + KP  SR
Sbjct: 1049 SKTNKRNANLISTDIAVDNDVNMEEDDKPGPSR 1081


>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
            F29D11.2 protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 538  SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 636
            S TNKR   L + DI+++N   +  + KP  SR
Sbjct: 1049 SKTNKRNANLISTDIAVDNDVNMEEDDKPGPSR 1081


>Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical
           protein T09A5.2a protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +1

Query: 550 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNH 648
           ++  QLHN+ + LN + ++ + I+P L+  T++
Sbjct: 230 EKRKQLHNQLVELNGNIRVFYRIRPQLASETDN 262


>U50312-1|AAA92318.1|  285|Caenorhabditis elegans Hypothetical
           protein B0222.1 protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 429 PDYKAPQYSAPQQYVSQAQPRNYGGKP 509
           P   AP YSAP  Y +  Q   YGG+P
Sbjct: 247 PPPSAPVYSAPPPYNNFQQNSPYGGRP 273


>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
           protein M110.4b protein.
          Length = 1155

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +3

Query: 414 PRYNSPDYKAPQ---YSAPQQYVSQAQPRNYGGKPNEDDGQYYPELYEQE 554
           P+Y    Y  PQ   Y  PQ    Q Q   YGG    D G + P++Y Q+
Sbjct: 56  PQYGQQQYNQPQTNHYYPPQAPQHQQQ---YGGYQRPDYG-HQPQMYNQQ 101


>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
           protein M110.4a protein.
          Length = 1156

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +3

Query: 414 PRYNSPDYKAPQ---YSAPQQYVSQAQPRNYGGKPNEDDGQYYPELYEQE 554
           P+Y    Y  PQ   Y  PQ    Q Q   YGG    D G + P++Y Q+
Sbjct: 56  PQYGQQQYNQPQTNHYYPPQAPQHQQQ---YGGYQRPDYG-HQPQMYNQQ 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,026,665
Number of Sequences: 27780
Number of extensions: 316181
Number of successful extensions: 1276
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)