Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D16
(855 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 43 4e-06
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.29
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 26 0.51
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 25 1.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 1.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.7
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 2.7
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 6.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 6.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.3
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 42.7 bits (96), Expect = 4e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Frame = +3
Query: 141 GDPKTAAIVQEARYLSGNGAFGAAYQQEDGINFKE-----ETDAEGN--RKGSYSYIDPS 299
G K A I + ++ +G + ++ +GI+ +E + D E +GS SY P
Sbjct: 22 GADKDAVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVDNETPVVSQGSDSYTAPD 81
Query: 300 GQRKTVNYIAGKNGFQAVGDHI 365
GQ+ ++ Y+A +NGFQ G HI
Sbjct: 82 GQQVSITYVADENGFQVQGSHI 103
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.29
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +1
Query: 439 RHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNI 618
R ++ N+ RK+ + S +T S K + L N+ I NN+ K ++N
Sbjct: 278 REQKSYKNENSYRKYRETSKERSRDRTERER--SREPKIISSLSNKTIHNNNNYKYNYNN 335
Query: 619 KPSLSRNTNHNLNTS 663
+ N N+N N +
Sbjct: 336 NNYNNNNYNNNYNNN 350
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 427 LQITRHHNIVRHNNTSRKHSPVTTAASPMK 516
LQ+T+HHN ++ + + + +T P+K
Sbjct: 123 LQMTKHHNFIKVCSVNDVNMTITELTDPVK 152
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 439 RHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNR 576
+ HN +S +HS + + SP T S++ Y + H++
Sbjct: 57 QQHNSPSPTGSSPQHSGSSASTSPAARTTSSMYPYVSAAAAHHHHQ 102
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 589 NNSTKLSHNIKPSLSRNTNHNLNTSLN 669
NNST + N + S N N+N N + N
Sbjct: 224 NNSTITAGNANTNASNNNNNNNNNNNN 250
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 550 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLN 657
+ T++ +RD +K H I SLS N N+N N
Sbjct: 60 RETSKERSRDRKEREKSK-EHKIISSLSNNYNYNNN 94
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 550 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLN 657
+ T++ +RD +K H I SLS N N+N N
Sbjct: 60 RETSKERSRDRKEREKSK-EHKIISSLSNNYNYNNN 94
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 550 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLN 657
+ T++ +RD +K H I SLS N N+N N
Sbjct: 60 RETSKERSRDRKEREKSK-EHKIISSLSNNYNYNNN 94
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +3
Query: 48 FKMYRLIVSAFVIVAVSCQQH 110
F+M+ L +S+FV+V +S ++
Sbjct: 117 FRMFGLYLSSFVLVCISMDRY 137
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 6.3
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 439 RHHNIVRHNNTSRKH-SPVTTAASPMKTTDSTILSYTN 549
R V + R H SP TTAA P T+ ++ + N
Sbjct: 431 RELEAVNLGSACRIHGSPATTAAPPQLPTEESVDALCN 468
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 6.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 484 SPVTTAASPMKTTDSTIL 537
S TT SPM +T STI+
Sbjct: 324 SSSTTTTSPMTSTKSTIV 341
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 598 TKLSHNIKPSLSRNTNHNLNTS 663
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 598 TKLSHNIKPSLSRNTNHNLNTS 663
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 598 TKLSHNIKPSLSRNTNHNLNTS 663
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 598 TKLSHNIKPSLSRNTNHNLNTS 663
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 598 TKLSHNIKPSLSRNTNHNLNTS 663
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 598 TKLSHNIKPSLSRNTNHNLNTS 663
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 598 TKLSHNIKPSLSRNTNHNLNTS 663
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,150
Number of Sequences: 438
Number of extensions: 4009
Number of successful extensions: 32
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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