Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D16
(855 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g22420.2 68416.m02830 protein kinase family protein contains ... 32 0.42
At3g22420.1 68416.m02829 protein kinase family protein contains ... 32 0.42
At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family... 31 0.74
At4g04740.1 68417.m00695 calcium-dependent protein kinase, putat... 31 1.3
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 30 1.7
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 30 1.7
At5g13810.1 68418.m01613 glutaredoxin family protein 30 2.3
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 30 2.3
At4g37650.1 68417.m05325 short-root transcription factor (SHR) 29 3.9
At4g08410.1 68417.m01390 proline-rich extensin-like family prote... 29 3.9
At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to S... 29 3.9
At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to S... 29 3.9
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 29 5.2
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 29 5.2
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 29 5.2
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 29 5.2
At1g67220.1 68414.m07651 zinc finger protein-related similar to ... 28 6.9
At5g44780.1 68418.m05488 expressed protein low similarity to SP|... 28 9.1
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 28 9.1
At4g39840.1 68417.m05645 expressed protein 28 9.1
At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family... 28 9.1
>At3g22420.2 68416.m02830 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 627
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 308 EDSELHRRQKWIPSRWRSHSDCASSCRSYSWLHARSSIQLSRLQGTTI*CATTIRLAST 484
+D E +K RW + R WL AR IQL +++G TI C T I ++ T
Sbjct: 551 DDGEKQSSRKVRSGRWSENE----MRRELRWLKARHKIQLMKMRGQTI-CETPIEISLT 604
>At3g22420.1 68416.m02829 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 568
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 308 EDSELHRRQKWIPSRWRSHSDCASSCRSYSWLHARSSIQLSRLQGTTI*CATTIRLAST 484
+D E +K RW + R WL AR IQL +++G TI C T I ++ T
Sbjct: 492 DDGEKQSSRKVRSGRWSENE----MRRELRWLKARHKIQLMKMRGQTI-CETPIEISLT 545
>At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family
protein
Length = 846
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 399 GYTPDPRYNSPDYKAPQYSAPQQYVSQAQPRNYGGKPNEDDGQYY 533
GY+ P P Y P APQ Y QAQ + + P+ G YY
Sbjct: 776 GYSIPPYGPPPPYHTPHGQAPQPYPPQAQQQPH---PSWQQGSYY 817
>At4g04740.1 68417.m00695 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Lycopersicon esculentum]
gi|19171502|emb|CAC87494
Length = 520
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 429 PDYKAPQYSAPQQYVSQAQPRNYGGKPNEDDGQYY 533
PD++ PQ +P +S P GKP ED ++Y
Sbjct: 35 PDHRKPQIPSPSIPISVRDPETILGKPFEDIRKFY 69
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = +3
Query: 105 QHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFGAAYQQEDGINFKEETD---AEGNRKG 275
+HE RR P YA D + E + G A + DG E D +EG R+
Sbjct: 27 EHECNRRQPNYASDEAEGGVEPEGEGEAEVEVHGEAEAESDGEQGDVELDPGESEGEREQ 86
Query: 276 SYSYIDP 296
S DP
Sbjct: 87 SSQEADP 93
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = +3
Query: 105 QHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFGAAYQQEDGINFKEETD---AEGNRKG 275
+HE RR P YA D + E + G A + DG E D +EG R+
Sbjct: 27 EHECNRRQPNYASDEAEGGVEPEGEGEAEVEVHGEAEAESDGEQGDVELDPGESEGEREQ 86
Query: 276 SYSYIDP 296
S DP
Sbjct: 87 SSQEADP 93
>At5g13810.1 68418.m01613 glutaredoxin family protein
Length = 274
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 514 KTTDS-TILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTN 645
KTT S T S+ N+ T +H R + +S SHN+ PSL+R T+
Sbjct: 13 KTTKSATTTSFFNRSLT-IHGRTVV--DSGPKSHNLNPSLNRTTS 54
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 414 PRYNSPDYKAPQYSAPQQ--YVSQAQPRNYGGKPNEDDGQYYPE 539
P N P Y+APQ P Q Y S Q Y +P G Y PE
Sbjct: 296 PPSNPPPYQAPQTQTPHQPSYQSPPQQPQYPQQPPPSSG-YNPE 338
>At4g37650.1 68417.m05325 short-root transcription factor (SHR)
Length = 531
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 442 HHNIVRHNNTSRKHSPVTTAASPMKTTDST 531
HHN HNN + +SP TT T ST
Sbjct: 70 HHNHHNHNNPNTYYSPFTTPTQYHPATSST 99
>At4g08410.1 68417.m01390 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 707
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 405 TPDPRYNSPDYKAPQYSAPQQYVSQAQPRNY 497
+P P Y SP K S+P QYV + P Y
Sbjct: 659 SPPPPYYSPSPKVDYKSSPPQYVYSSPPTPY 689
>At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1050
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +3
Query: 399 GYTPDPR--------YNSPDYKAPQYSAPQQYVSQAQPRNYGGKPNE 515
GYTP P+ Y P + QY PQ+Y Q R GG P++
Sbjct: 49 GYTPQPQQGGRGGRGYGQPPQQQQQYGGPQEY----QGRGRGGPPHQ 91
>At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1048
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +3
Query: 399 GYTPDPR--------YNSPDYKAPQYSAPQQYVSQAQPRNYGGKPNE 515
GYTP P+ Y P + QY PQ+Y Q R GG P++
Sbjct: 49 GYTPQPQQGGRGGRGYGQPPQQQQQYGGPQEY----QGRGRGGPPHQ 91
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 408 PDPRYNSPDYKAPQYSAP--QQYVSQAQPR 491
P P Y++ Y AP YSAP Q Y S + R
Sbjct: 62 PPPLYSTQPYSAPSYSAPPSQSYGSDNKKR 91
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 408 PDPRYNSPDYKAPQYSAP--QQYVSQAQPR 491
P P Y++ Y AP YSAP Q Y S + R
Sbjct: 62 PPPLYSTQPYSAPSYSAPPSQSYGSDNKKR 91
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 408 PDPRYNSPDYKAPQYSAP--QQYVSQAQPR 491
P P Y++ Y AP YSAP Q Y S + R
Sbjct: 62 PPPLYSTQPYSAPSYSAPPSQSYGSDNKKR 91
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 408 PDPRYNSPDYKAPQYSAP--QQYVSQAQPR 491
P P Y++ Y AP YSAP Q Y S + R
Sbjct: 62 PPPLYSTQPYSAPSYSAPPSQSYGSDNKKR 91
>At1g67220.1 68414.m07651 zinc finger protein-related similar to
SP|Q09472 E1A-associated protein p300 {Homo sapiens},
SP|Q92793 CREB-binding protein {Homo sapiens}; contains
Pfam profiles PF00569: Zinc finger ZZ type, PF00628:
PHD-finger, PF02135: TAZ zinc finger
Length = 1357
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 466 NTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKL 606
N +K V PMK + T T ++H + SLN+ KL
Sbjct: 373 NHEKKLGTVVDIVEPMKCDEGTKCEVTTTNKGKIHTEERSLNHEKKL 419
>At5g44780.1 68418.m05488 expressed protein low similarity to
SP|Q38732 DAG protein, chloroplast precursor
{Antirrhinum majus}
Length = 723
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = +3
Query: 93 VSCQQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFGAAYQQEDGINFKEETDAEGNRK 272
V Q +GA+ P + G QE+ G GAF Q N + T + N+
Sbjct: 356 VGYNQGQGAQTPPYHQGQGAQTPPYQESPNNYGQGAFVQYNQGPPQGNVVQTTQEKYNQM 415
Query: 273 GSYSYIDPSG 302
G +Y SG
Sbjct: 416 GQGNYAPQSG 425
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 126 VPKYAGDPKTAAIVQEARYLSGNGAFGAAYQQEDGINFKEETDAEGN 266
+P Y DPK A +QE+R A + + + TDAE N
Sbjct: 116 MPIYVKDPKVLAALQESRRRQAPYAGAFLLKDDPSADSSSSTDAEKN 162
>At4g39840.1 68417.m05645 expressed protein
Length = 451
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 466 NTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 636
N+++ S T +S +K +S S TN ++ + D+S ++S+K IKP S+
Sbjct: 126 NSTKSSSNTTKTSSELKKLNSGTKS-TNSTSSIKKSADLSKSSSSKNKTTIKPPSSK 181
>At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family
protein
Length = 466
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = -1
Query: 660 GIEVVVGIAAEAGLDIVA--ELGTVVE--ADISVVELRSSLVRIAQD 532
G+ V +G+AA AGL + A E+ T+++ ++V+L + A+D
Sbjct: 276 GVSVALGVAAAAGLSVFAFTEIETILQLLGSAALVQLAGKKLLFAED 322
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,133,867
Number of Sequences: 28952
Number of extensions: 293058
Number of successful extensions: 1080
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1989897600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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