Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D15
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,127... 271 5e-73
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 266 2e-71
07_01_0003 + 16711-17016,17107-17177,17269-17461,17929-17984,185... 31 0.88
03_01_0055 + 466834-467147,467521-467590,467669-467713,467801-46... 30 2.0
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 30 2.7
01_01_0277 + 2274383-2274465,2274889-2274955,2275040-2275110,227... 29 3.6
01_01_0367 + 2872650-2873045,2873800-2873940,2874255-2874364,287... 29 6.2
07_01_0345 + 2497910-2498114,2498311-2498458,2498551-2498742,249... 28 8.2
01_07_0059 + 40805196-40805381,40805593-40805925 28 8.2
>07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,
1278314-1278367
Length = 944
Score = 271 bits (664), Expect = 5e-73
Identities = 133/244 (54%), Positives = 180/244 (73%)
Frame = +3
Query: 3 LSHIYHHALHDNWFQARDLLLMSHLQETVQHSDPSTQILYNRTMANLGLCAFRRGNVKEA 182
L IYHHA+ D + ARDLLLMSHLQ+ VQ D S+QIL+NR MA LGLCAFR G + EA
Sbjct: 525 LCDIYHHAISDKFSVARDLLLMSHLQDGVQLMDISSQILFNRVMAQLGLCAFRAGLIIEA 584
Query: 183 HGCLAELMMTGKPKELLAQGLLPQRQHERSKEQEKIEKQRQMPFHMHINLELLECVYLVS 362
HGCL+EL TG+ KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE +L+
Sbjct: 585 HGCLSELYSTGRVKELLAQGVQQSRYHEKTPEQERLERRRQMPYHMHINLELLEATHLIC 644
Query: 363 AMLIEIPYMAAHEFDARRRMISKTFYQNLRASERQALVGPPESMREHAVAAARAMRRGDW 542
AMLIE+P MAA +D RR+ +++TF + L SERQ VGPPE++R+H +AA RA+R+GD+
Sbjct: 645 AMLIEVPNMAASTYD-RRKSMNRTFRRLLEISERQTFVGPPENVRDHVMAATRALRKGDY 703
Query: 543 RACLNYIVNEKMNAKVWDLMVGADNVRAMLGRLIREESLRTYLXTYAHVYASLSLRPLAD 722
+ + ++N + ++W L+ ++V ML I+EE+LRTYL +Y+ Y SLSL L
Sbjct: 704 QKAFD-VIN---SLEIWKLLRNKEHVLEMLKLKIKEEALRTYLLSYSSCYESLSLDQLTT 759
Query: 723 MFEL 734
MF+L
Sbjct: 760 MFDL 763
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 266 bits (652), Expect = 2e-71
Identities = 131/244 (53%), Positives = 178/244 (72%)
Frame = +3
Query: 3 LSHIYHHALHDNWFQARDLLLMSHLQETVQHSDPSTQILYNRTMANLGLCAFRRGNVKEA 182
L IYHHA+ D + ARDLLLMSHLQ+ VQ D S+QIL+NR MA LGLCAFR G + EA
Sbjct: 839 LCDIYHHAISDEFSVARDLLLMSHLQDGVQLMDISSQILFNRVMAQLGLCAFRAGLIIEA 898
Query: 183 HGCLAELMMTGKPKELLAQGLLPQRQHERSKEQEKIEKQRQMPFHMHINLELLECVYLVS 362
HGCL+EL TG+ KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE +L+
Sbjct: 899 HGCLSELYSTGRVKELLAQGVQQSRYHEKTPEQERLERRRQMPYHMHINLELLEATHLIC 958
Query: 363 AMLIEIPYMAAHEFDARRRMISKTFYQNLRASERQALVGPPESMREHAVAAARAMRRGDW 542
AMLIE+P MAA +D +R+ +++TF + L SERQ VGPPE++R+H +AA RA+ +GD
Sbjct: 959 AMLIEVPNMAASTYD-KRKFMNRTFRRLLEISERQTFVGPPENVRDHVMAATRALSKGDH 1017
Query: 543 RACLNYIVNEKMNAKVWDLMVGADNVRAMLGRLIREESLRTYLXTYAHVYASLSLRPLAD 722
+ + ++N + ++W L+ ++V ML I+EE+LRTYL +Y+ Y SLSL L
Sbjct: 1018 QKAFD-VIN---SLEIWKLLRNKEHVLEMLKLKIKEEALRTYLFSYSSCYQSLSLDQLTT 1073
Query: 723 MFEL 734
MF+L
Sbjct: 1074 MFDL 1077
>07_01_0003 +
16711-17016,17107-17177,17269-17461,17929-17984,
18511-18588,18873-18929,19396-19903
Length = 422
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 486 ESMREHAVAAARA-MRRGDWRACLNYIVNEKMNAKVW 593
E +RE AAR M + DWRA I NE+ +A +W
Sbjct: 353 EELRETMRKAARKEMEKFDWRAATRKIRNEQYSAAIW 389
>03_01_0055 +
466834-467147,467521-467590,467669-467713,467801-467869,
468006-468059,469010-469120,469225-469358,469438-469477,
469790-469849,469934-470115,470290-470785
Length = 524
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 30 HDNWFQARDLLLMSHLQETVQHSDPSTQILYNRTMA-NLGLCAFRRGN-VKEAHGCLAEL 203
H WF+ +D+ + + V ++D ++LY R A +LG + ++E + L EL
Sbjct: 102 HRIWFRPKDITNLYAPEVAVPNNDLEKEVLYLRGKAESLGETVMKHEKLIEEMNERLVEL 161
Query: 204 MMTGKPKELLAQGLLPQRQHERSKE 278
K + L Q L+ +R KE
Sbjct: 162 TSAQKRQILSEQRLMNVGSSKRQKE 186
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 51 GLGTSCHAGHGDRYEKV 1
G+ HAGHGDRY+KV
Sbjct: 531 GVSDIIHAGHGDRYQKV 547
>01_01_0277 +
2274383-2274465,2274889-2274955,2275040-2275110,
2275550-2275667,2275755-2275828,2276094-2276149,
2276237-2276320,2276422-2276509,2276602-2276679,
2276814-2276870,2277074-2277578
Length = 426
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 486 ESMREHAVAAARA-MRRGDWRACLNYIVNEKMNAKVW 593
+ R++ ARA M + DWRA I NE NA +W
Sbjct: 358 KEFRDNMGMTARAEMEKCDWRAASKKIRNEFYNAAIW 394
>01_01_0367 +
2872650-2873045,2873800-2873940,2874255-2874364,
2875279-2875390,2875959-2876030,2876605-2876696,
2877116-2877236,2877712-2877834,2877935-2878130,
2878221-2878408,2878553-2878624,2879336-2879434,
2880027-2880107,2880337-2880405,2880730-2880787,
2881181-2881347
Length = 698
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 612 QLRPLNPKPWHSFFHSRCNLGKLSNHLCAWPLQPPLRALASTQEGRQAPD 463
+L+PLNP P S L S+ A PLR LA+T P+
Sbjct: 16 RLKPLNPSPTASHLRRLLLLSTASSTSSASCSPSPLRTLAATDAATPPPE 65
>07_01_0345 +
2497910-2498114,2498311-2498458,2498551-2498742,
2498918-2499046,2499304-2499473,2499659-2499789,
2500007-2500090
Length = 352
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 535 PLRMALAAATACSRIDSGGPTSA*RSLARRF**KVLLIMRRRASNSCAAMYGIS 374
PL + A CS +S G A R R + LL RRR SN CA ++
Sbjct: 50 PLPVLSRAVAGCSNHNSVGEDKA-RETLERVMAQALLKARRRRSNVCAVCLAVA 102
>01_07_0059 + 40805196-40805381,40805593-40805925
Length = 172
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 147 LCAFRRGNVKEAHGCLAELMMTGKPKELLAQGLLPQRQHERSKEQEK 287
LCA R V + H C A+L++ G P LL+ +++ +SKE+E+
Sbjct: 29 LCAPRPRRV-QVHPCSADLIL-GPPPFLLSSNNTNKQREGKSKEEEE 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,877,201
Number of Sequences: 37544
Number of extensions: 430539
Number of successful extensions: 1070
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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