Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D15
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical pr...   320   8e-88
Z36238-5|CAA85277.1|  381|Caenorhabditis elegans Hypothetical pr...    28   9.7  
AL110485-25|CAB60373.1|  672|Caenorhabditis elegans Hypothetical...    28   9.7  
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ...    28   9.7  

>Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical protein
            T23D8.4 protein.
          Length = 898

 Score =  320 bits (786), Expect = 8e-88
 Identities = 145/244 (59%), Positives = 194/244 (79%)
 Frame = +3

Query: 3    LSHIYHHALHDNWFQARDLLLMSHLQETVQHSDPSTQILYNRTMANLGLCAFRRGNVKEA 182
            L H+Y+ A+HD W +ARDLLLMSH+Q  V HSD  TQILYNRT+  LGLCAFR G ++EA
Sbjct: 528  LCHVYYLAVHDKWHRARDLLLMSHMQAIVDHSDVDTQILYNRTICQLGLCAFRHGFIREA 587

Query: 183  HGCLAELMMTGKPKELLAQGLLPQRQHERSKEQEKIEKQRQMPFHMHINLELLECVYLVS 362
            H  L+E+  T + KELLAQ +   RQHE++ EQEKI++ RQ+P+HMHIN+EL+ECVYL+ 
Sbjct: 588  HQGLSEIQNTQRAKELLAQAV-GTRQHEKTAEQEKIDRSRQVPYHMHINVELMECVYLIC 646

Query: 363  AMLIEIPYMAAHEFDARRRMISKTFYQNLRASERQALVGPPESMREHAVAAARAMRRGDW 542
            +ML+EIP+MA+ EF+ RRRM+S++F+  L+ SE+ +L GPPE+ REH VAA++AM  GDW
Sbjct: 647  SMLLEIPHMASCEFEMRRRMLSRSFHYQLKQSEKASLTGPPENTREHVVAASKAMLNGDW 706

Query: 543  RACLNYIVNEKMNAKVWDLMVGADNVRAMLGRLIREESLRTYLXTYAHVYASLSLRPLAD 722
            + C +YIVN+KMN KVW+L   A+ V+ M+ R I+EESLRTYL TY+ VYA++SL+ LAD
Sbjct: 707  KKCQDYIVNDKMNQKVWNLFHNAETVKGMVVRRIQEESLRTYLLTYSTVYATVSLKKLAD 766

Query: 723  MFEL 734
            +FEL
Sbjct: 767  LFEL 770


>Z36238-5|CAA85277.1|  381|Caenorhabditis elegans Hypothetical
           protein R74.6 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 258 QHERSKEQEKIEKQRQMPFHMHINLELLECVYLVSAMLIEIPYM 389
           QHE  K  EK  +     F  H+NL++++CV + S   ++  +M
Sbjct: 177 QHE--KGLEKFYEAVSTAFMRHVNLQVVKCVIVASRGFVKDAFM 218


>AL110485-25|CAB60373.1|  672|Caenorhabditis elegans Hypothetical
           protein Y46G5A.31 protein.
          Length = 672

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = +3

Query: 171 VKEAHGCLAELMMTGKPKELLAQGL-------LPQRQHERSKEQEKIEKQRQMPFHMHIN 329
           V E  G  AE  +  KP  L   GL       L + Q+  ++ +EKI +  +  FH H++
Sbjct: 276 VSEITGLEAEHFLCRKPDVLTPNGLNVVKFAALHEFQNLHAQNKEKINQFIRGHFHGHLD 335

Query: 330 LELLECVYLVSA 365
            +L + +Y  +A
Sbjct: 336 FDLDKTLYFFTA 347


>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
           protein Y20F4.4 protein.
          Length = 1319

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
 Frame = +3

Query: 81  ETVQHSDPSTQILYNRTMANLGLCAFRRGNVKEAHGCLAELMMTGKPKELLAQGLLPQRQ 260
           E V+H  PST I+   T+ N+      R    EAH C   + + G  ++   + L  ++ 
Sbjct: 69  ELVEHRAPSTGIVCRGTVENMRQLRQDRMKTIEAHRC-RNIFIVGATRDEFDEYLKYKKA 127

Query: 261 HERSKEQ------EKIEKQRQMPFHMHINLELL 341
           +E+ +        E+ ++ R  P H   +  L+
Sbjct: 128 NEKHQSYGTPLYGEEEQQTRHQPQHRRASTPLV 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,356,799
Number of Sequences: 27780
Number of extensions: 352806
Number of successful extensions: 884
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)