Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D14
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 182 4e-46
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 182 4e-46
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 151 8e-37
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 151 8e-37
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 151 8e-37
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 36 0.028
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 4.2
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 4.2
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 29 4.2
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 28 7.3
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 28 7.3
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 28 7.3
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 28 7.3
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 9.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 182 bits (442), Expect = 4e-46
Identities = 85/123 (69%), Positives = 99/123 (80%)
Frame = +3
Query: 195 TMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLL 374
+M KRL IG+ENTEENRR+YRQLLF++ A L++ ISGVI+FHET YQK DDG P +LL
Sbjct: 39 SMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALL 98
Query: 375 GKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNT 554
++GIIPGIKVDKGVVP+ G+ E TTQGLDDL RCAQYKKDG FAKWRCV KI T
Sbjct: 99 QEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTT 158
Query: 555 PSL 563
PS+
Sbjct: 159 PSV 161
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 623 NASCQLSSPEVLPDGEHDLDRXQKVTEVVLAAVYKALNDHHVYLEGTLLXP 775
N + PE+LPDGEH L R QK+TE VL+ VY ALN+HHV+LEGTLL P
Sbjct: 181 NGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKP 231
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 80 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTG 193
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTG 38
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 538 RLAATPPRYQAIQENANVLARYASICQSQRIVPIVEP 648
++++T P A++E A+ LARYASICQ +VPIVEP
Sbjct: 153 KISSTTPSVTALKEIASNLARYASICQQNGLVPIVEP 189
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 182 bits (442), Expect = 4e-46
Identities = 85/123 (69%), Positives = 99/123 (80%)
Frame = +3
Query: 195 TMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLL 374
+M KRL IG+ENTEENRR+YRQLLF++ A L++ ISGVI+FHET YQK DDG P +LL
Sbjct: 39 SMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALL 98
Query: 375 GKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNT 554
++GIIPGIKVDKGVVP+ G+ E TTQGLDDL RCAQYKKDG FAKWRCV KI T
Sbjct: 99 QEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTT 158
Query: 555 PSL 563
PS+
Sbjct: 159 PSV 161
Score = 72.9 bits (171), Expect = 3e-13
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = +2
Query: 554 PLVTKLSRKTPMFSPATPPSVRANASCQLSSPEVLPDGEHDLDRXQKVTEVVLAAVYKAL 733
P VT L + N + PE+LPDGEH L R QK+TE VL+ VY AL
Sbjct: 159 PSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHAL 218
Query: 734 NDHHVYLEGTLLXP 775
N+HHV+LEGTLL P
Sbjct: 219 NEHHVFLEGTLLKP 232
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 80 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTG 193
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTG 38
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 151 bits (365), Expect = 8e-37
Identities = 73/122 (59%), Positives = 91/122 (74%)
Frame = +3
Query: 195 TMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLL 374
T+GKRL I +EN E NR++YRQLLF++ L+++ISGVIL+ ET +Q D G LL
Sbjct: 43 TIGKRLDAINLENNETNRQKYRQLLFTTPN-LNQHISGVILYEETFHQSTDKGEKFTDLL 101
Query: 375 GKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNT 554
K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRCVL IG +T
Sbjct: 102 IKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHT 161
Query: 555 PS 560
PS
Sbjct: 162 PS 163
Score = 77.8 bits (183), Expect = 9e-15
Identities = 39/58 (67%), Positives = 41/58 (70%)
Frame = +2
Query: 617 RANASCQLSSPEVLPDGEHDLDRXQKVTEVVLAAVYKALNDHHVYLEGTLLXPTW*RP 790
+AN + PEVL DGEHDL R QKVTE VLA VYKAL DHHVYLEGTLL P P
Sbjct: 182 QANGLVPIVEPEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTP 239
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 556 PRYQAIQENANVLARYASICQSQRIVPIVEP 648
P + + ENANVLARYASICQ+ +VPIVEP
Sbjct: 162 PSHLGMLENANVLARYASICQANGLVPIVEP 192
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 104 TPELQEELKKIAQAIVAPAKGILAADESTGYNGQ 205
T ++EL +IA IV KGILAADESTG G+
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGK 46
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 151 bits (365), Expect = 8e-37
Identities = 73/122 (59%), Positives = 91/122 (74%)
Frame = +3
Query: 195 TMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLL 374
T+GKRL I +EN E NR++YRQLLF++ L+++ISGVIL+ ET +Q D G LL
Sbjct: 43 TIGKRLDAINLENNETNRQKYRQLLFTTPN-LNQHISGVILYEETFHQSTDKGEKFTDLL 101
Query: 375 GKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNT 554
K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRCVL IG +T
Sbjct: 102 IKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHT 161
Query: 555 PS 560
PS
Sbjct: 162 PS 163
Score = 77.8 bits (183), Expect = 9e-15
Identities = 39/58 (67%), Positives = 41/58 (70%)
Frame = +2
Query: 617 RANASCQLSSPEVLPDGEHDLDRXQKVTEVVLAAVYKALNDHHVYLEGTLLXPTW*RP 790
+AN + PEVL DGEHDL R QKVTE VLA VYKAL DHHVYLEGTLL P P
Sbjct: 182 QANGLVPIVEPEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTP 239
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 556 PRYQAIQENANVLARYASICQSQRIVPIVEP 648
P + + ENANVLARYASICQ+ +VPIVEP
Sbjct: 162 PSHLGMLENANVLARYASICQANGLVPIVEP 192
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 104 TPELQEELKKIAQAIVAPAKGILAADESTGYNGQ 205
T ++EL +IA IV KGILAADESTG G+
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGK 46
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 151 bits (365), Expect = 8e-37
Identities = 73/122 (59%), Positives = 91/122 (74%)
Frame = +3
Query: 195 TMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLL 374
T+GKRL I +EN E NR++YRQLLF++ L+++ISGVIL+ ET +Q D G LL
Sbjct: 43 TIGKRLDAINLENNETNRQKYRQLLFTTPN-LNQHISGVILYEETFHQSTDKGEKFTDLL 101
Query: 375 GKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNT 554
K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRCVL IG +T
Sbjct: 102 IKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHT 161
Query: 555 PS 560
PS
Sbjct: 162 PS 163
Score = 77.8 bits (183), Expect = 9e-15
Identities = 39/58 (67%), Positives = 41/58 (70%)
Frame = +2
Query: 617 RANASCQLSSPEVLPDGEHDLDRXQKVTEVVLAAVYKALNDHHVYLEGTLLXPTW*RP 790
+AN + PEVL DGEHDL R QKVTE VLA VYKAL DHHVYLEGTLL P P
Sbjct: 182 QANGLVPIVEPEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTP 239
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 556 PRYQAIQENANVLARYASICQSQRIVPIVEP 648
P + + ENANVLARYASICQ+ +VPIVEP
Sbjct: 162 PSHLGMLENANVLARYASICQANGLVPIVEP 192
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 104 TPELQEELKKIAQAIVAPAKGILAADESTGYNGQ 205
T ++EL +IA IV KGILAADESTG G+
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGK 46
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 36.3 bits (80), Expect = 0.028
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 4/113 (3%)
Frame = +2
Query: 317 VPRDPLPEG*RWNPSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRP-- 490
+P +P G P G+ G G P H G QG P + M G P+P P
Sbjct: 587 MPPGMMPPG--MMPPGMHPGMAGMPPMHPGMQGMPPMHPGMQGMPGMPHGPPQPPQNPAL 644
Query: 491 -VQEGRLPLRQVALRAEDWPQHPLV-TKLSRKTPMFSPATPPSVRANASCQLS 643
V R + A P HP++ + + TP + P P S + A +S
Sbjct: 645 MVAGNRAGSAEAAAAQMGNPHHPMMGANMWQLTPHYPPPLPASSSSGAGTPVS 697
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 101 PTPELQEELKKIAQAIVAPAKGILAADESTGYNGQAFAGHRRGE--HRGEPSSLSPTAIQ 274
PTP ++++KK+A+ ++ + G+ + + YN + + ++ G+ HRG ++P I+
Sbjct: 2 PTPSTKKKVKKVAEDPLS-SSGVSSLSGISSYNIRKISIYKNGDRYHRGVKFVINPRVIK 60
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 101 PTPELQEELKKIAQAIVAPAKGILAADESTGYNGQAFAGHRRGE--HRGEPSSLSPTAIQ 274
PTP ++++KK+A+ ++ + G+ + + YN + + ++ G+ HRG ++P I+
Sbjct: 2 PTPSTKKKVKKVAEDPLS-SSGVSSLSGISSYNIRKISIYKNGDRYHRGVKFVINPRVIK 60
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 465 DDLAQRCAQYKKDGCHFAKWRC-VLKIGRNTPSLPSYPGKRQ-CSRPLRLHLSEPTHRAN 638
DD + +Y GC++ ++ C ++IG TP G S PL +L+
Sbjct: 649 DDASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLA------- 701
Query: 639 CRAPKFYLMASTT 677
CR K+ L++ST+
Sbjct: 702 CRDKKWVLLSSTS 714
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 465 DDLAQRCAQYKKDGCHFAKWRC-VLKIGRNTPSLPSYPGKRQ-CSRPLRLHLSEPTHRAN 638
DD + +Y GC++ ++ C ++IG TP G S PL +L+
Sbjct: 649 DDASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLA------- 701
Query: 639 CRAPKFYLMASTT 677
CR K+ L++ST+
Sbjct: 702 CRDKKWVLLSSTS 714
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 465 DDLAQRCAQYKKDGCHFAKWRC-VLKIGRNTPSLPSYPGKRQ-CSRPLRLHLSEPTHRAN 638
DD + +Y GC++ ++ C ++IG TP G S PL +L+
Sbjct: 649 DDASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLA------- 701
Query: 639 CRAPKFYLMASTT 677
CR K+ L++ST+
Sbjct: 702 CRDKKWVLLSSTS 714
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 465 DDLAQRCAQYKKDGCHFAKWRC-VLKIGRNTPSLPSYPGKRQ-CSRPLRLHLSEPTHRAN 638
DD + +Y GC++ ++ C ++IG TP G S PL +L+
Sbjct: 649 DDASSVLNRYSASGCYYVQFFCRPIEIGDTTPVSTILSGDTSYLSAPLSANLA------- 701
Query: 639 CRAPKFYLMASTT 677
CR K+ L++ST+
Sbjct: 702 CRDKKWVLLSSTS 714
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 341 G*RWNPSGLPAGEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 478
G R P P G GHH P H G P+ R G HH RP P
Sbjct: 382 GGRHGPPHCP-GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 348 DGTPLVSLLGKKGIIPGIKVDKGVVPLFGSEDECT 452
D +PLVS+LG P + + VPLF ED CT
Sbjct: 10 DPSPLVSVLGLIKS-PDLMIGSTEVPLFEEEDMCT 43
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 183 NPPXTMGKRLQ-DIGV-----ENTEENRRRYRQLLFSSDA 284
N + + LQ D+GV E TEEN +RY QL+ SD+
Sbjct: 777 NAKLKLAEDLQTDVGVIQQLYEQTEENEKRYEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 183 NPPXTMGKRLQ-DIGV-----ENTEENRRRYRQLLFSSDA 284
N + + LQ D+GV E TEEN +RY QL+ SD+
Sbjct: 763 NAKLKLAEDLQTDVGVIQQLYEQTEENEKRYEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 183 NPPXTMGKRLQ-DIGV-----ENTEENRRRYRQLLFSSDA 284
N + + LQ D+GV E TEEN +RY QL+ SD+
Sbjct: 763 NAKLKLAEDLQTDVGVIQQLYEQTEENEKRYEQLVSESDS 802
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = -2
Query: 684 RSRSCSPSGKTSGLDNWHDALALTDGGVAGENIGVFLDSLVTRGCCGQSSARNATWRSGS 505
++ S + S T+ + W D G+ E++ + ++++T G ++ W S +
Sbjct: 709 KNSSTAASASTTPVSKWTDRQLKRQLGLTREDLNRYREAMLTTGERNRNKNVKINWES-A 767
Query: 504 RPSCTGRSAGRGRPDPG 454
+ + GR G G + G
Sbjct: 768 QVNRAGRVKGAGASEDG 784
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = -2
Query: 684 RSRSCSPSGKTSGLDNWHDALALTDGGVAGENIGVFLDSLVTRGCCGQSSARNATWRSGS 505
++ S + S T+ + W D G+ E++ + ++++T G ++ W S +
Sbjct: 663 KNSSTAASASTTPVSKWTDRQLKRQLGLTREDLNRYREAMLTTGERNRNKNVKINWES-A 721
Query: 504 RPSCTGRSAGRGRPDPG 454
+ + GR G G + G
Sbjct: 722 QVNRAGRVKGAGASEDG 738
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -2
Query: 528 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 439
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 422 PAVRIGRRMHHPGSGR-PRPALRPVQEGR-LPLRQVALRAEDWPQHPLVTKLSRKTPMFS 595
PA RI R ++P RP RP + R P Q + + PQ P + + + P
Sbjct: 2010 PAPRIQPRPYNPQPVVVQRPQFRPQPQPRPQPQPQPQPQPQPQPQQPYIQRPALTLPFQQ 2069
Query: 596 PATPPSV 616
P PP +
Sbjct: 2070 PQYPPPI 2076
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,543,135
Number of Sequences: 27780
Number of extensions: 454512
Number of successful extensions: 1438
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -