Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D11
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin...    34   0.11 
Z81542-9|CAI79191.1|  400|Caenorhabditis elegans Hypothetical pr...    34   0.14 
Z81542-8|CAB04417.2|  402|Caenorhabditis elegans Hypothetical pr...    34   0.14 
Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z82052-9|CAB04825.2|  338|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical ...    29   4.1  
AF040651-4|AAB95014.1|  234|Caenorhabditis elegans Hypothetical ...    29   4.1  
U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U40937-1|AAA81693.1|  396|Caenorhabditis elegans Collagen protei...    29   5.4  
M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AF026210-1|ABA54418.1|  116|Caenorhabditis elegans Hypothetical ...    29   5.4  
Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z81478-2|CAB03933.1|  195|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    28   9.4  

>AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin
           protein 3 protein.
          Length = 409

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
 Frame = +1

Query: 178 DVPQGSTAPQRTARHGTEHVMTNGCIALKAPTFHWEPQHCGEIKDFICEQTRCY----YY 345
           D   GSTA       G   V T  C+  +  +  W    C E + ++CE    +    YY
Sbjct: 95  DDNSGSTAAYDNFSPGNPKVTTGSCVYFETSSGRWLSAPCTEPRSYVCETPSTHEDPCYY 154

Query: 346 NYGS 357
           NY +
Sbjct: 155 NYNN 158


>Z81542-9|CAI79191.1|  400|Caenorhabditis elegans Hypothetical
           protein F49A5.5b protein.
          Length = 400

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
 Frame = +1

Query: 178 DVPQGSTAPQRTARHGTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICEQTRCYY-- 342
           DV  G+T+       G  + M  GCI  K        W    C EI  F+CE     Y  
Sbjct: 221 DVKSGTTSAYNNFADGYPNNMAGGCIYYKTTGTQAGQWSSGSCNEIMSFVCELPATIYDS 280

Query: 343 ---YNYGS 357
              YNY +
Sbjct: 281 TCKYNYNN 288


>Z81542-8|CAB04417.2|  402|Caenorhabditis elegans Hypothetical
           protein F49A5.5a protein.
          Length = 402

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
 Frame = +1

Query: 178 DVPQGSTAPQRTARHGTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICEQTRCYY-- 342
           DV  G+T+       G  + M  GCI  K        W    C EI  F+CE     Y  
Sbjct: 223 DVKSGTTSAYNNFADGYPNNMAGGCIYYKTTGTQAGQWSSGSCNEIMSFVCELPATIYDS 282

Query: 343 ---YNYGS 357
              YNY +
Sbjct: 283 TCKYNYNN 290


>Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical
           protein D1054.7 protein.
          Length = 113

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 37  WTSGNNLGTDMFLWMSTGLPFNAT 108
           WT G+  GTD F+W  TG P NA+
Sbjct: 57  WTDGSTTGTDGFIW-ETGEPNNAS 79


>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 37  WTSGNNLGTDMFLWMSTGLPFNATFN 114
           WT G+  GTD F+W  TG P N  +N
Sbjct: 119 WTDGSTTGTDGFIW-KTGDPNNYLYN 143


>Z82052-9|CAB04825.2|  338|Caenorhabditis elegans Hypothetical
           protein T25E12.7 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = +1

Query: 178 DVPQGSTAPQRTARHGTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICE 324
           D+  GSTA       G  +++   C+           W  + CG++ +F+CE
Sbjct: 152 DIENGSTANYSNFADGFPNIVYGNCVYFITSGDEAGQWGNEQCGQVMNFVCE 203


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
            C46C2.1b protein.
          Length = 1677

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 706  AAYLTNEAHDAPVGHXIASTAEPDATEHS 792
            A  +T+ A  +PV H ++S + P AT HS
Sbjct: 1176 AQVITHLATPSPVSHSLSSNSSPSATTHS 1204


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
            C46C2.1a protein.
          Length = 1838

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 706  AAYLTNEAHDAPVGHXIASTAEPDATEHS 792
            A  +T+ A  +PV H ++S + P AT HS
Sbjct: 1176 AQVITHLATPSPVSHSLSSNSSPSATTHS 1204


>AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical
           protein Y68A4B.1 protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 26/72 (36%), Positives = 30/72 (41%)
 Frame = +1

Query: 37  WTSGNNLGTDMFLWMSTGLPFNATFNYMRRLPIDAPAQHADDSMDPLDVPQGSTAPQRTA 216
           WT G+  GTD FLW + G P N    Y        PA    D+   +D   G  A Q   
Sbjct: 87  WTDGSTTGTDGFLWRN-GDPNNGGIYY--------PAY--KDNCLAVDARVGLLADQPC- 134

Query: 217 RHGTEHVMTNGC 252
             GT H M  GC
Sbjct: 135 --GTAHYMGYGC 144


>AF040651-4|AAB95014.1|  234|Caenorhabditis elegans Hypothetical
           protein W04H10.4 protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 37  WTSGNNLGTDMFLWMSTGLPFNATFN 114
           WT G+  GTD F+W   G P N  +N
Sbjct: 177 WTDGSTTGTDGFIW-KAGDPNNYQYN 201


>U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical
           protein C50F7.5 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +1

Query: 469 TCRPTSTLTISSASCDLLPLXGLQSAHLKTSALFQIPTANRLPLFA---SCGRSFPRSRP 639
           T R  +T T +  S DL P+ G  SA +  S+   I   + +P  +   S G   P   P
Sbjct: 41  TSRGIATTTFAPTSSDL-PIAGSSSAPVIASSADPILPTSVVPQPSNEPSPGTVAPSDEP 99

Query: 640 GPEGRTTQGPYEDDE 684
            P G  + GP    E
Sbjct: 100 SPSGPPSPGPVNPSE 114


>U40937-1|AAA81693.1|  396|Caenorhabditis elegans Collagen protein
           164 protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 613 GRSFPRSRPGPEGRTTQGPYEDDEGMVGD 699
           G+ F +  PGP+G T       DEG+ G+
Sbjct: 213 GKGFAKGAPGPKGPTGMDGLAGDEGLPGE 241


>M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical
           protein B0303.4 protein.
          Length = 616

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
 Frame = +1

Query: 475 RPTSTLTISSASCDLLPLXGL-------QSAHLKTSALFQI 576
           RP + LTIS   C+LL   GL       Q  HL+TS LF I
Sbjct: 507 RPATLLTISQWVCNLLVDNGLLEQDDDDQETHLQTSTLFWI 547


>AF026210-1|ABA54418.1|  116|Caenorhabditis elegans Hypothetical
           protein F48A11.2 protein.
          Length = 116

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 590 DSHYSRAADAHSRDHDQDQKEEPLRVRTKMMR 685
           + HYS + +   ++ D++ +E   RVRT+M R
Sbjct: 66  EQHYSSSQEVAKKEEDKEYEEPKRRVRTEMDR 97


>Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical
           protein F35C5.8 protein.
          Length = 372

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = +1

Query: 244 NGCIA---LKAPTFHWEPQHCGEIKDFICEQTRCYYYNY 351
           N C+A       T  W P  C     FICEQ  C   NY
Sbjct: 330 NACVADMKYSDGTTAWTPVSCANNFRFICEQVACDTDNY 368


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 497  SHRQAATFFPXTASSLHTSRLAPCFKSPPQIDSHYSRAADAHSRDHDQDQKEEPLRVRT 673
            S   ++ FF   A++L  S    C    P+I+   S   +  S  HD+   +  LR+ T
Sbjct: 1293 SSSSSSEFFVPRAAALEVSETKICEGYNPEIERSLSADEEEESTSHDELSAQPELRLPT 1351


>Z81478-2|CAB03933.1|  195|Caenorhabditis elegans Hypothetical
           protein C31G12.2 protein.
          Length = 195

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 37  WTSGNNLGTDMFLWMSTGLPFNA 105
           WT G+  GTD ++W S G P NA
Sbjct: 138 WTDGSTTGTDGWIWRS-GEPNNA 159


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 37  WTSGNNLGTDMFLWMSTGLPFNATFN 114
           WT G+  G+D F+W     P N + N
Sbjct: 143 WTDGSATGSDAFIWNVATEPNNGSLN 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,363,276
Number of Sequences: 27780
Number of extensions: 382011
Number of successful extensions: 1247
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)