Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D09
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0052 + 7788655-7789850,7789921-7790011                           29   3.6  
10_08_0818 + 20801061-20801298,20801409-20801509,20801600-208018...    29   3.6  
02_05_0015 - 24992253-24993993,24995331-24995695                       29   4.7  
08_02_1075 + 24149570-24149833,24150008-24150307                       29   6.3  

>11_02_0052 + 7788655-7789850,7789921-7790011
          Length = 428

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -2

Query: 632 VKQNFEFVQCVTFV-EHFVSRHLDEH 558
           +K + ++  CV F  EHFV+R++D H
Sbjct: 339 IKNDVDYYSCVCFGNEHFVARYIDRH 364


>10_08_0818 +
           20801061-20801298,20801409-20801509,20801600-20801817,
           20802461-20802824
          Length = 306

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +1

Query: 376 PGCACSPGL---LQSLYAHPSAARPNPGH 453
           PG AC P L   L  L  HPS A+P+PG+
Sbjct: 10  PGSACIPLLILLLLLLLLHPSEAQPSPGY 38


>02_05_0015 - 24992253-24993993,24995331-24995695
          Length = 701

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 213 AKYVVGDHRNGDAKIELDANKRQFTGMTREEVLKYADDPFWVN 341
           AK V+  +  GD      + K   T + RE V  YADDP   N
Sbjct: 531 AKKVLTMNPTGDLSSARFSEKNLLTAIDREAVFSYADDPCSAN 573


>08_02_1075 + 24149570-24149833,24150008-24150307
          Length = 187

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 125 LRFAEVRFGRPEFRNQLVND 66
           LRFA V+FG PEF    +ND
Sbjct: 60  LRFAIVKFGHPEFAGLALND 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,764,028
Number of Sequences: 37544
Number of extensions: 445528
Number of successful extensions: 1308
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)