Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D09
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    55   7e-10
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    46   3e-07
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    46   3e-07
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    44   2e-06
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    26   0.51 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   2.7  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   2.7  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   3.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   3.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   3.6  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.3  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   8.3  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 55.2 bits (127), Expect = 7e-10
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
 Frame = +3

Query: 603 TLDEFKILFNKIXKIGIRVIVDLIPNYVFTNHTWFVQSENSTXPYTDYFIWTXEHLLXGF 782
           TL +F  L  +   +G++VI+D +PN+    H WF +S     PY +Y++W    ++ G 
Sbjct: 98  TLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYVWRDARIVNGT 157

Query: 783 K---NXHASVY------XXXKRXMXYLHQF 845
           +   N   SV+         +R   YLHQF
Sbjct: 158 RQPPNNWLSVFWGSAWQWNEERKQYYLHQF 187


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 46.4 bits (105), Expect = 3e-07
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = +3

Query: 603 TLDEFKILFNKIXKIGIRVIVDLIPNYVFTNHTWFVQSENSTXPYTDYFIWTXEHLLXG 779
           T+ +   L +   + G+++I+D +PN+    H WF  S  +  PY +Y+IW    ++ G
Sbjct: 98  TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNG 156


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 46.4 bits (105), Expect = 3e-07
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = +3

Query: 603 TLDEFKILFNKIXKIGIRVIVDLIPNYVFTNHTWFVQSENSTXPYTDYFIWTXEHLLXG 779
           T+ +   L +   + G+++I+D +PN+    H WF  S  +  PY +Y+IW    ++ G
Sbjct: 98  TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNG 156


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = +3

Query: 603 TLDEFKILFNKIXKIGIRVIVDLIPNYVFTNHTWFVQS-----ENSTXPYTDYFIW 755
           T+ + + L  +  K  ++VI+DL+PN+    H WF  S      N+T  Y DY+IW
Sbjct: 96  TIKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIW 151


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 25.8 bits (54), Expect = 0.51
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 369 WVAWLCMLAGAIAVIVRAPKCGPPEPRTWY-ELGPLVGLDLVD 494
           WV   C     I VI++ P CGP     ++ +L PL  L   D
Sbjct: 9   WVGGFCHSIIQIPVIIQLPFCGPNVIDHYFRDLQPLFKLACTD 51


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +1

Query: 358 SCCSGWPGCA-CSPGLLQSLYAHPSA 432
           S CS  P  A  S G L  +Y HPSA
Sbjct: 118 STCSSHPTAAFISYGTLFFIYVHPSA 143


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 316 YFSTSSLVIPVNCRLLASSSIFASPFLWSPTTYFASDMST 197
           Y+    L       +L  S  FA   +W P T+FA+D ++
Sbjct: 91  YWKDERLAFSQEEEVLTLSGDFAEK-IWVPDTFFANDKNS 129


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 300 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 425
           E+  K  +D  W  +   L  LF W+  L +L G   +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 300 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 425
           E+  K  +D  W  +   L  LF W+  L +L G   +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = -3

Query: 427 LGARTMTAIAPASMHSQATQNNTNSDQRKFT---QKGSSAYFSTSSLVIPVNCRLLASSS 257
           LG  T     P    S  + NN     R  T    K S A+   SS +  +  R      
Sbjct: 451 LGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARR---EGI 507

Query: 256 IFASPFLWSPTTYFASDM 203
             A+PF  SPTT+  +D+
Sbjct: 508 RLAAPFNASPTTWSPADL 525


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -3

Query: 253 FASPFLWSPTTYFASDMSTRV 191
           F    +W+PT Y +++ S+ +
Sbjct: 92  FVRDLIWTPTVYVSNEPSSAI 112


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 469 PWSDWTWSMPSN 504
           P+ DWTW+   N
Sbjct: 104 PYPDWTWAKNEN 115


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 360 VLFWVAWLCMLAGAIAVIVRAP 425
           +  WV  L   AG + +I +AP
Sbjct: 484 LFLWVFTLACTAGTLGIIFQAP 505


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,591
Number of Sequences: 438
Number of extensions: 4482
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)