Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D05
         (833 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049     29   3.5  
06_01_0399 - 2860692-2861241,2861330-2862171                           29   4.6  
10_01_0274 - 2901033-2901778,2902475-2902634                           28   8.0  

>07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049
          Length = 444

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 505 TRPACCATCPTLTPSYGPPSRRCLE-EGPGSRSATTDV*PANL 630
           T P+C    P   PS GP      E  G GS SATT   PA L
Sbjct: 40  TPPSCTPGTPAALPSPGPDKEPEREAAGSGSGSATTPRSPAQL 82


>06_01_0399 - 2860692-2861241,2861330-2862171
          Length = 463

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -1

Query: 557 GPY--EGVRVGQVAQQAGRVTELRERSTRQQLLGESG 453
           GPY   G   GQ+A++   V++ R    R QL GE+G
Sbjct: 228 GPYGAAGDAQGQIARECFHVSDARVEELRAQLAGEAG 264


>10_01_0274 - 2901033-2901778,2902475-2902634
          Length = 301

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 511 PACCATCPTLTPSYGPPSRRCLEEGPG 591
           P C  + P+  P YG P+  C    PG
Sbjct: 185 PGCSCSPPSTPPGYGQPAPECPPADPG 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,427,013
Number of Sequences: 37544
Number of extensions: 259094
Number of successful extensions: 712
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)