Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D05
(833 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC073905-1|AAH73905.1| 266|Homo sapiens UBR4 protein protein. 120 6e-27
BC063573-1|AAH63573.1| 394|Homo sapiens UBR4 protein protein. 120 6e-27
BC018694-1|AAH18694.2| 799|Homo sapiens ZUBR1 protein protein. 120 6e-27
AL357564-3|CAI20974.1| 5183|Homo sapiens ubiquitin protein ligas... 120 6e-27
AL137127-5|CAI19272.1| 5183|Homo sapiens ubiquitin protein ligas... 120 6e-27
AL137127-4|CAI19271.1| 890|Homo sapiens ubiquitin protein ligas... 120 6e-27
AJ505016-1|CAD43719.1| 588|Homo sapiens retinoblastoma-associat... 120 6e-27
AF348492-1|AAL83880.1| 5183|Homo sapiens p600 protein. 120 6e-27
AF055010-1|AAC09360.1| 475|Homo sapiens unknown protein. 120 6e-27
AB007931-1|BAA32307.1| 2276|Homo sapiens KIAA0462 protein protein. 120 6e-27
AL137127-3|CAI19270.1| 258|Homo sapiens ubiquitin protein ligas... 109 9e-24
BC096758-1|AAH96758.1| 809|Homo sapiens UBR4 protein protein. 102 2e-21
>BC073905-1|AAH73905.1| 266|Homo sapiens UBR4 protein protein.
Length = 266
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 80 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 139
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 140 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 194
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 195 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 254
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 255 ESFLKDLLNSVP 266
>BC063573-1|AAH63573.1| 394|Homo sapiens UBR4 protein protein.
Length = 394
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 208 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 267
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 268 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 322
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 323 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 382
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 383 ESFLKDLLNSVP 394
>BC018694-1|AAH18694.2| 799|Homo sapiens ZUBR1 protein protein.
Length = 799
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 613 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 672
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 673 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 727
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 728 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 787
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 788 ESFLKDLLNSVP 799
>AL357564-3|CAI20974.1| 5183|Homo sapiens ubiquitin protein ligase E3
component n-recognin 4 protein.
Length = 5183
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 4997 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 5056
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 5057 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 5111
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 5112 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 5171
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 5172 ESFLKDLLNSVP 5183
>AL137127-5|CAI19272.1| 5183|Homo sapiens ubiquitin protein ligase E3
component n-recognin 4 protein.
Length = 5183
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 4997 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 5056
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 5057 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 5111
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 5112 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 5171
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 5172 ESFLKDLLNSVP 5183
>AL137127-4|CAI19271.1| 890|Homo sapiens ubiquitin protein ligase E3
component n-recognin 4 protein.
Length = 890
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 704 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 763
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 764 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 818
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 819 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 878
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 879 ESFLKDLLNSVP 890
>AJ505016-1|CAD43719.1| 588|Homo sapiens retinoblastoma-associated
factor 600-like protein protein.
Length = 588
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 402 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 461
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 462 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 516
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 517 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 576
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 577 ESFLKDLLNSVP 588
>AF348492-1|AAL83880.1| 5183|Homo sapiens p600 protein.
Length = 5183
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 4997 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 5056
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 5057 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 5111
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 5112 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 5171
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 5172 ESFLKDLLNSVP 5183
>AF055010-1|AAC09360.1| 475|Homo sapiens unknown protein.
Length = 475
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 289 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 348
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 349 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 403
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 404 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 463
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 464 ESFLKDLLNSVP 475
>AB007931-1|BAA32307.1| 2276|Homo sapiens KIAA0462 protein protein.
Length = 2276
Score = 120 bits (289), Expect = 6e-27
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 2090 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 2149
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK V
Sbjct: 2150 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVP 2204
Query: 363 AATVEQ-WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDP 539
+ E W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP
Sbjct: 2205 TSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDP 2264
Query: 540 DAFIRATIEEMP 575
++F++ + +P
Sbjct: 2265 ESFLKDLLNSVP 2276
>AL137127-3|CAI19270.1| 258|Homo sapiens ubiquitin protein ligase
E3 component n-recognin 4 protein.
Length = 258
Score = 109 bits (263), Expect = 9e-24
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 1/185 (0%)
Frame = +3
Query: 24 SRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKIDQLKRMI 203
+R +RE L+ +L + +E E +GP P +WR +++ L+R++
Sbjct: 79 TRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRVEILRRLL 138
Query: 204 LLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVSAATVEQ- 380
+ Q D+ K ++ Y+ + F A+VDL+YN MFK V + E
Sbjct: 139 VTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKVPTSNTEGG 193
Query: 381 WPVKLAEYIRHNDEANAKAAERVVTTLTEELLPCASFAEFCDAAGLLRDLPDPDAFIRAT 560
W LAEYIRHND +AA++ + T EE +P +F+EF D AGLL ++ DP++F++
Sbjct: 194 WSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDPESFLKDL 253
Query: 561 IEEMP 575
+ +P
Sbjct: 254 LNSVP 258
>BC096758-1|AAH96758.1| 809|Homo sapiens UBR4 protein protein.
Length = 809
Score = 102 bits (244), Expect = 2e-21
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Frame = +3
Query: 3 LVYVINTSRVAAREVSALETYLGCAPSRLLEPCHEAEGPXXXXXXXXXXXPHSKWRTQKI 182
++YV+NT+R +RE L+ +L + +E E +GP P +WR ++
Sbjct: 602 VLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRV 661
Query: 183 DQLKRMILLGQVXXXXXXXXXXXXXXXEDREPKPWAEYKPYVTFHAVVDLLYNVMFKSVS 362
+ L+R+++ Q D+ K ++ Y+ + F A+VDL+YN MFK +
Sbjct: 662 EILRRLLVTSQARAVAPGGATRLT----DKAVKDYSAYRSSLLFWALVDLIYN-MFKKQT 716
Query: 363 AATV-------------EQ---------WPVKLAEYIRHNDEANAKAAERVVTTLTEELL 476
TV E+ W LAEYIRHND +AA++ + T EE +
Sbjct: 717 TPTVGGIDTGSLEPCVCEKVPTSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFM 776
Query: 477 PCASFAEFCDAAGLLRDLPDPDAFIRATIEEMP 575
P +F+EF D AGLL ++ DP++F++ + +P
Sbjct: 777 PVETFSEFLDVAGLLSEITDPESFLKDLLNSVP 809
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,180,881
Number of Sequences: 237096
Number of extensions: 1292913
Number of successful extensions: 3360
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3348
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -