Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D05
         (833 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-5|AAD47120.1|  814|Caenorhabditis elegans Hypothetical ...    34   0.11 
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ...    34   0.11 
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ...    34   0.11 
Z81494-11|CAN99681.1|  455|Caenorhabditis elegans Hypothetical p...    28   9.5  
Z81494-7|CAI79161.1|  387|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z81494-6|CAC42275.1|  451|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>AF003140-5|AAD47120.1|  814|Caenorhabditis elegans Hypothetical
           protein C44E4.1b protein.
          Length = 814

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 23/80 (28%), Positives = 29/80 (36%)
 Frame = +3

Query: 276 PKPWAEYKPYVTFHAVVDLLYNVMFKSVSAATVEQWPVKLAEYIRHNDEANAKAAERVVT 455
           P  W  +KP +   A VD  +N + K      +E     L E I              V 
Sbjct: 727 PATWDGFKPTLMTWAFVDAYFNKVIKITGEDRLEWLREHLVETINKT--------RGFVD 778

Query: 456 TLTEELLPCASFAEFCDAAG 515
                +LPC   AEFCD  G
Sbjct: 779 DFDSNILPCEDVAEFCDVTG 798


>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
            protein C44E4.1a protein.
          Length = 2712

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 23/80 (28%), Positives = 29/80 (36%)
 Frame = +3

Query: 276  PKPWAEYKPYVTFHAVVDLLYNVMFKSVSAATVEQWPVKLAEYIRHNDEANAKAAERVVT 455
            P  W  +KP +   A VD  +N + K      +E     L E I              V 
Sbjct: 2625 PATWDGFKPTLMTWAFVDAYFNKVIKITGEDRLEWLREHLVETINKT--------RGFVD 2676

Query: 456  TLTEELLPCASFAEFCDAAG 515
                 +LPC   AEFCD  G
Sbjct: 2677 DFDSNILPCEDVAEFCDVTG 2696


>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
            protein C44E4.1c protein.
          Length = 2710

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 23/80 (28%), Positives = 29/80 (36%)
 Frame = +3

Query: 276  PKPWAEYKPYVTFHAVVDLLYNVMFKSVSAATVEQWPVKLAEYIRHNDEANAKAAERVVT 455
            P  W  +KP +   A VD  +N + K      +E     L E I              V 
Sbjct: 2623 PATWDGFKPTLMTWAFVDAYFNKVIKITGEDRLEWLREHLVETINKT--------RGFVD 2674

Query: 456  TLTEELLPCASFAEFCDAAG 515
                 +LPC   AEFCD  G
Sbjct: 2675 DFDSNILPCEDVAEFCDVTG 2694


>Z81494-11|CAN99681.1|  455|Caenorhabditis elegans Hypothetical
           protein F02E9.10c protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 617 HTSVVALRDPGPSSRHLLDGG 555
           HTS ++     P+SRHLL GG
Sbjct: 296 HTSTISALSFSPTSRHLLSGG 316


>Z81494-7|CAI79161.1|  387|Caenorhabditis elegans Hypothetical
           protein F02E9.10b protein.
          Length = 387

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 617 HTSVVALRDPGPSSRHLLDGG 555
           HTS ++     P+SRHLL GG
Sbjct: 232 HTSTISALSFSPTSRHLLSGG 252


>Z81494-6|CAC42275.1|  451|Caenorhabditis elegans Hypothetical
           protein F02E9.10a protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 617 HTSVVALRDPGPSSRHLLDGG 555
           HTS ++     P+SRHLL GG
Sbjct: 296 HTSTISALSFSPTSRHLLSGG 316


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,895,690
Number of Sequences: 27780
Number of extensions: 187155
Number of successful extensions: 553
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)