Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D03
(858 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 136 3e-32
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 101 7e-22
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 95 9e-20
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 88 1e-17
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 60 2e-09
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 60 2e-09
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) 31 1.6
SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 29 3.7
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 29 4.8
SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24) 29 6.4
SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1) 28 8.5
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 136 bits (328), Expect = 3e-32
Identities = 79/185 (42%), Positives = 105/185 (56%)
Frame = +3
Query: 156 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 335
TL A G D KA++ +LC R QR I+ +KT +G+DLI +LKSE+ G E+ ++
Sbjct: 92 TLDIASNKPGCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVI 151
Query: 336 ALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 515
ALMTP + A L A+ G+GTDE +IE+L T +N I I Y L+ + LE D+
Sbjct: 152 ALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIA 211
Query: 516 GDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXRWGTDESIFNSILITRS 695
GDTSG FK+ +SLC A +G RWGTDES FNSIL +RS
Sbjct: 212 GDTSGKFKKFLISLCNALYKAGEG-------------------RWGTDESKFNSILASRS 252
Query: 696 YQQLR 710
+ QLR
Sbjct: 253 FDQLR 257
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 101 bits (242), Expect = 7e-22
Identities = 53/167 (31%), Positives = 86/167 (51%)
Frame = +3
Query: 243 EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAII 422
++ + + Y KDL+ +L ++ ++ + +L+ P + L+ A+ G+GT E +I
Sbjct: 477 KLNDEYNKRYKKDLVEQLDGKVAIDVHEAVTSLLLPATKADVRSLYYAMKGLGTKEAQLI 536
Query: 423 EILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXX 602
EILCT SN I+ I Y + YG+SL D+K +TSG F+ L +L +RDE+ ++
Sbjct: 537 EILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLETLLKGSRDESTDVNKEL 596
Query: 603 XXXXXXXXXXXXXXRWGTDESIFNSILITRSYQQLRQXSPXTKLLTG 743
RWGTDE F +IL RS ++ K L+G
Sbjct: 597 VTKDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYKTLSG 643
Score = 64.9 bits (151), Expect = 8e-11
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Frame = +3
Query: 156 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 335
+L AMKG GT E +I++LC R + EI + + YG+ L ++KSE +G+ EN++
Sbjct: 520 SLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLE 579
Query: 336 ALM-------TPL-PHFYAKELHDAVS-GI---GTDEEAIIEILCTLSNYGIRTISAFYE 479
L+ T + K+ VS G+ GTDE+ I IL S+ ++ + A Y+
Sbjct: 580 TLLKGSRDESTDVNKELVTKDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYK 639
Query: 480 QLY-GKSLESDLKGDTSGHFKRLCVSLCMANRDENQ 584
L G SL ++ + G + + L +D +Q
Sbjct: 640 TLSGGVSLADTVRDEMKGDLRDALLVLISYGQDPSQ 675
Score = 41.1 bits (92), Expect = 0.001
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 16/194 (8%)
Frame = +3
Query: 189 DEKAIIDVLCRRGIVQRL--EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHF 362
D+K I +++ + + ++ ++ + +K Y +DL L +L +L + A++ P
Sbjct: 17 DKKKIKELVMKAAVDKKKLKKLGDDYKKQYKQDLTDALDGKLEEDLHEAVAAMLLPGNEA 76
Query: 363 YAKELHDAVSGIGT-DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL--------K 515
A+ L+ A+ I + EE + C+L + S +E L + + K
Sbjct: 77 DARTLYFAMKNIDSIKEEYQKKYGCSLEDDVKEETSGDFEDLLVALMSVRISTLIYHLIK 136
Query: 516 GDTSGHFKRLC-----VSLCMANRDENQGIDXXXXXXXXXXXXXXXXXRWGTDESIFNSI 680
+ F C + + RDE+ I+ +WGTDE F I
Sbjct: 137 TPSKPIFIIKCKLTVFLWVYQGKRDESDEINEDLAHKDAEALIEAGIKKWGTDEDCFIEI 196
Query: 681 LITRSYQQLRQXSP 722
TRSY QL+ P
Sbjct: 197 FTTRSYPQLQAMFP 210
Score = 37.5 bits (83), Expect = 0.014
Identities = 44/206 (21%), Positives = 79/206 (38%), Gaps = 18/206 (8%)
Frame = +3
Query: 180 FGTDEKAIIDVLCRRGIVQRLEIAETFKT-NYGKDLISELKSELTGNLENVIVALMT--P 350
+GTDE I +L +R + +KT + G L ++ E+ G+L + ++ L++
Sbjct: 612 WGTDEDQFITILSQRSSAHVQAVLAEYKTLSGGVSLADTVRDEMKGDLRDALLVLISYGQ 671
Query: 351 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 530
P A + +A G D + I+ + + A Y Y +++ S
Sbjct: 672 DPSQAAADKLNAALHDG-DTVTVARIVAGTQQGPLADLEASYNATYNPKAYFEVEKRCSE 730
Query: 531 HFKRLCVSLCM---------------ANRDENQGIDXXXXXXXXXXXXXXXXXRWGTDES 665
K++ ++ A RDE+ ID RWGT+E
Sbjct: 731 DLKKIILNRLKDKTEDKKIKKSKDVKATRDESTKIDEDLVTQDAAALVSAGVARWGTEED 790
Query: 666 IFNSILITRSYQQLRQXSPXTKLLTG 743
F +IL RS ++ + L+G
Sbjct: 791 QFITILTQRSSAHVQAVLAEYRTLSG 816
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 94.7 bits (225), Expect = 9e-20
Identities = 46/91 (50%), Positives = 63/91 (69%)
Frame = +3
Query: 186 TDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 365
T+E +I +L R QR+EI + +KT YGKDL+++LKSEL+GNLE ++A+M P +
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAMMEPSVLYD 61
Query: 366 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 458
AK L + G GTDEE +I+ILCT SN G R
Sbjct: 62 AKCLRRGMRGAGTDEETLIDILCTRSNQGNR 92
Score = 41.5 bits (93), Expect(2) = 2e-08
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 543 LCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXRWGTDESIFNSILITRSYQQLR 710
LC NRD N +D +WGTDES FN +L +RS+ QL+
Sbjct: 83 LCTRSNQGNRDTNMTVDMAKATKEAQDLYKAGEKKWGTDESRFNVVLASRSFPQLQ 138
Score = 35.1 bits (77), Expect(2) = 2e-08
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 402 TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSL 557
T+E +I IL SN I Y+ +YGK L +DLK + SG+ + +++
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAM 53
Score = 35.1 bits (77), Expect = 0.074
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 159 LRKAMKGFGTDEKAIIDVLCRR 224
LR+ M+G GTDE+ +ID+LC R
Sbjct: 65 LRRGMRGAGTDEETLIDILCTR 86
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 87.8 bits (208), Expect = 1e-17
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3
Query: 159 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 338
L+KAMKGFG+DE+AII+VL + QRL IA++FK Y KDL++ELKSEL+G E+ IVA
Sbjct: 311 LKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDAIVA 370
Query: 339 LMTPLPHFYAKELHDAVSGIGTDEEAII 422
L+ P A LH A+ + I+
Sbjct: 371 LLLPPEQLDANALHGAMQAKRVSADEIV 398
Score = 54.4 bits (125), Expect = 1e-07
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Frame = +3
Query: 366 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 545
A++L A+ G G+DEEAIIE+L + + I+ ++Q Y K L ++LK + SG F+
Sbjct: 308 AEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDA 367
Query: 546 CVSLCM------ANR----------DENQGIDXXXXXXXXXXXXXXXXXRWGTDESIFNS 677
V+L + AN ++ ++ +WGTDES+F
Sbjct: 368 IVALLLPPEQLDANALHGAMQAKRVSADEIVNEDQAYEDAKNLYEAGEKKWGTDESVFTK 427
Query: 678 ILITRSYQQLR 710
IL RS QLR
Sbjct: 428 ILTCRSDLQLR 438
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +3
Query: 159 LRKAMKGFGTDEKAIIDVL-CRRGIVQRLE-IAETFKTNYGKDLISELKSELTGNLENVI 332
L+KA++ +D+K +V+ C +L+ +++ + Y KDL+ +L ++ ++ +
Sbjct: 52 LQKAIEK--SDKKTATEVIVCNASDEGKLKKLSDEYNKRYEKDLVEQLDGKVADDVHEAV 109
Query: 333 VALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYG 452
+L+ P + L+ A+ G+GT E +IE LCT SN G
Sbjct: 110 TSLLLPATQADVRSLYYAMKGLGTKEAQLIETLCTRSNTG 149
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 60.5 bits (140), Expect = 2e-09
Identities = 36/132 (27%), Positives = 66/132 (50%)
Frame = +3
Query: 174 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL 353
K +GTDE VL R Q + +D+++ + E++G+L+ + P
Sbjct: 27 KKWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNSIDREMSGDLKAGLQCARNPA 86
Query: 354 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 533
+F A L ++ G GTD+ +I ++ + S + I A + Q Y K++ ++GD SG
Sbjct: 87 EYF-ADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGD 145
Query: 534 FKRLCVSLCMAN 569
+K+L ++L N
Sbjct: 146 YKKLLMALPSPN 157
Score = 44.0 bits (99), Expect = 2e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +3
Query: 159 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 338
L K+MKG GTD+ +I V+ R V +EI +F Y K + ++ + +G+ + +++A
Sbjct: 93 LWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGDYKKLLMA 152
Query: 339 LMTP 350
L +P
Sbjct: 153 LPSP 156
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 567 NRDENQGIDXXXXXXXXXXXXXXXXXRWGTDESIFNSILITRSYQQLR 710
NRD N +D +WGTDES FN +L +RS+ QL+
Sbjct: 2 NRDTNMTVDMAKATKEAQDLYKAGEKKWGTDESRFNVVLASRSFPQLQ 49
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/102 (33%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Frame = +3
Query: 159 LRKAMKGFGTD--EKAIIDVLCR----RGIVQRLEIAETFKTNYGKDLISELKSELTGNL 320
L +A++G ++ + AIID+L R R + RL+ + +K + +D++ L+ L ++
Sbjct: 353 LHQAIQGMVSEGNKDAIIDILARNCDERSKLDRLK--DKYKDQHDQDILEALQPHLGDDV 410
Query: 321 ENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 446
++ + + + F AK LHDA+ G+GTDE+ +IEI+CT N
Sbjct: 411 KDPVESFFSSSSAFDAKCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 58.8 bits (136), Expect = 5e-09
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 189 DEKAIIDVLCRRGIVQRL-EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 365
D++ I+ +L R ++ ++ + +K Y KDL ELKS L + + +L
Sbjct: 21 DKERIMGILGRTSEKDKMNKLEDKYKDLYKKDLNEELKSVLDEEIMKALESLAEEAAMKD 80
Query: 366 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 458
AK L++A G GTDE+A+I ILCT SN G R
Sbjct: 81 AKTLYEATKGFGTDEDALISILCTRSNKGQR 111
Score = 39.9 bits (89), Expect = 0.003
Identities = 32/136 (23%), Positives = 48/136 (35%)
Frame = +3
Query: 363 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 542
Y K+L++ + + DEE + + ++ YE G + D
Sbjct: 49 YKKDLNEELKSV-LDEEIMKALESLAEEAAMKDAKTLYEATKGFGTDEDAL------ISI 101
Query: 543 LCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXRWGTDESIFNSILITRSYQQLRQXSP 722
LC RDE++ D WGTDE F + RS+ Q+
Sbjct: 102 LCTRSNKGQRDESKEADIHLAKKDAKDLMEAGVASWGTDEGAFIRVFTQRSFTQISAMCA 161
Query: 723 XTKLLTGKNXEDSIXK 770
K LT E+SI K
Sbjct: 162 EYKKLTKVEIEESIDK 177
Score = 35.9 bits (79), Expect = 0.042
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 156 TLRKAMKGFGTDEKAIIDVLCRR 224
TL +A KGFGTDE A+I +LC R
Sbjct: 83 TLYEATKGFGTDEDALISILCTR 105
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 34.3 bits (75), Expect = 0.13
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +3
Query: 330 IVALMTPLPHFYAK-ELHDAVSGIGTDEEA---IIEILCTLSNYGIRTISAFYEQLYGKS 497
+V + +F K E+HDA+ G T+ ++ +++ L ++YG + S + +L G S
Sbjct: 537 VVTVFNMTSNFTTKSEVHDAIDGAVTENDSYRKVLDFLKEWASYGNKEYSEAWIRLDGIS 596
Query: 498 LESDLKGDTSGHFKRLC 548
+E+ LKG +S H R C
Sbjct: 597 VEA-LKGKSSWH--RFC 610
>SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19)
Length = 925
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +1
Query: 289 ANSRVNSPATWKMSSSH**LPCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYP 468
A N P T S +P T+ + ++ L+PTK S + PT+ +P
Sbjct: 206 AKGTYNFPLTKSTKSQPATIPVSTTKFPTEAQTTEYLQPTKTSLSSTAPPHPTVYRLPST 265
Query: 469 HFTNNCTARA 498
NN T A
Sbjct: 266 ESINNFTDTA 275
>SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 353 APLLR*GAPRCCLRNWNRRRSHHRDP 430
+P L PRCC +N N R H DP
Sbjct: 138 SPFLYEPGPRCCNQNMNNRSKCHADP 163
>SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 222 RGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVS--- 392
R +V RL+I +T + K+ L I++L+T Y + L +A+
Sbjct: 81 RNLVSRLKITFAGETLQDTNRYDVFKTYEELYLSKTILSLLTDHGELYPRALSEALLFEI 140
Query: 393 GIGTDEEAIIEILCTLSNYGIRTISAFYEQL 485
+ T ++ ++ T +YGI+ + YE L
Sbjct: 141 TLATVDQVVVGSDATKLSYGIKNLELEYENL 171
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +3
Query: 201 IIDVLCRRGIVQRLEIAETFKTNYGKD--LISELKSELTGNLENVIVALMTPLPHFYAKE 374
++ +L + I + L+ ++NYG+ L S+ S L +++++ + + +
Sbjct: 149 VVPILSFKDIQEPLDYVS--ESNYGQQVSLFSKNPSSLAPLIDSLVNQVCRVNINTKCQR 206
Query: 375 LHDAVSGIGTDEEAI--IEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 542
D + +G + A+ + + L + IRT+ AF + SDL + S +F R
Sbjct: 207 GPDVLPFVGRKDSAVSTLSVYDALRTFSIRTLVAFRSNAINDKILSDLLENESSNFLR 264
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 29.1 bits (62), Expect = 4.8
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +3
Query: 204 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 368
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 524 IENACRAGPIANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 583
Query: 369 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 500
K + + VSG GTD + + I T+S ISA L+ K++
Sbjct: 584 KYMRNKVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQKAV 627
>SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1062
Score = 28.7 bits (61), Expect = 6.4
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +3
Query: 204 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 368
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 435 IENACRAGPLPNMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 494
Query: 369 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 503
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 495 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 539
>SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24)
Length = 285
Score = 28.7 bits (61), Expect = 6.4
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +3
Query: 204 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 368
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 171 IENACRAGPLANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 230
Query: 369 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 503
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 231 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 275
>SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1)
Length = 345
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 363 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 503
Y K + + VSG GTD + + I T S ISA + K++E
Sbjct: 47 YVKYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,522,758
Number of Sequences: 59808
Number of extensions: 440972
Number of successful extensions: 1320
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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