Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_D02
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 34 0.11
Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical p... 30 2.4
AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical ... 30 2.4
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF038623-2|AAB94158.1| 342|Caenorhabditis elegans Seven tm rece... 28 7.3
AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z p... 28 7.3
Z72502-3|CAA96593.2| 218|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical p... 28 9.6
AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein. 28 9.6
AY037799-1|AAK94764.1| 352|Caenorhabditis elegans GLY-19 protein. 28 9.6
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 260 DMKTQMELLIMRIQAEFCRALEK-EEDKEAKFTVDRWTRKEGGGGITCVLQDGRVFEKAG 436
D + EL I+ F R + E ++ + D W +K G GG +DG EKA
Sbjct: 70 DNMNESELFGKTIRVNFARPPKATERSQKPVWADDEWLKKYGRGGEAAAEEDGDA-EKAA 128
Query: 437 VNISVVSGKLP 469
+ S S KLP
Sbjct: 129 TSSSSASTKLP 139
>Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +2
Query: 134 LXTGIVAYNQYQSKAKMKEI----MQLKNYMANPITPVEQLEQNKDDMKTQMELLIMRIQ 301
L I+ + KA KEI + +N + I+ QL ++ + + ELL MR
Sbjct: 107 LLNEIIVRTSFNEKAMCKEIGHQEAEFENRLKEVISGRAQLTLKSEEAQKKCELL-MREH 165
Query: 302 AEFCRALEKEEDKEAKFTVDRW 367
+ + + ED KF RW
Sbjct: 166 SNVYEDVREMEDNIEKFDASRW 187
>AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +2
Query: 134 LXTGIVAYNQYQSKAKMKEI----MQLKNYMANPITPVEQLEQNKDDMKTQMELLIMRIQ 301
L I+ + KA KEI + +N + I+ QL ++ + + ELL MR
Sbjct: 107 LLNEIIVRTSFNEKAMCKEIGHQEAEFENRLKEVISGRAQLTLKSEEAQKKCELL-MREH 165
Query: 302 AEFCRALEKEEDKEAKFTVDRW 367
+ + + ED KF RW
Sbjct: 166 SNVYEDVREMEDNIEKFDASRW 187
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 182 MKEIMQLKNYMANPITPVEQLEQNKDDMKTQMELLIMRIQAEFCRALEKEEDKEAKFTV 358
M + QLK+ +A + LE DD+K Q+ R + LE EE+++ + T+
Sbjct: 335 MSQTAQLKSTIAGQQEHIRSLETTVDDLKQQIASQTERNDVLEFQVLEMEENQKQQDTI 393
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 182 MKEIMQLKNYMANPITPVEQLEQNKDDMKTQMELLIMRIQAEFCRALEKEEDKEAKFTV 358
M + QLK+ +A + LE DD+K Q+ R + LE EE+++ + T+
Sbjct: 1 MSQTAQLKSTIAGQQEHIRSLETTVDDLKQQIASQTERNDVLEFQVLEMEENQKQQDTI 59
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 182 MKEIMQLKNYMANPITPVEQLEQNKDDMKTQMELLIMRIQAEFCRALEKEEDKEAKFTV 358
M + QLK+ +A + LE DD+K Q+ R + LE EE+++ + T+
Sbjct: 335 MSQTAQLKSTIAGQQEHIRSLETTVDDLKQQIASQTERNDVLEFQVLEMEENQKQQDTI 393
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 206 NYMANPITPVEQLEQNKDDMKTQMELLIMRIQAEFCRALEKEEDKEAKFTVDRWTRKEG 382
N + + I VEQ +NK D+ +EL++ Q + LE++ + VDR R++G
Sbjct: 96 NSVQDKIDLVEQKPENKKDIVRMLELVVDCHQFDAHPPLEEDGLASSTDKVDRKKRQQG 154
>AF038623-2|AAB94158.1| 342|Caenorhabditis elegans Seven tm
receptor protein 166 protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 570 TPMVPTIHFNYRYFEVQDKNGVQWWFG 650
TP + IHF YR+F ++ K ++++ G
Sbjct: 103 TPFLIAIHFIYRFFALERKGNLKYFSG 129
>AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z
protein 1 protein.
Length = 306
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 594 SGWWGPWGFLGWMTALTPAAKNGSSAF 514
+ W PWG GW +T KN S +
Sbjct: 265 NSWGEPWGEHGWFKIVTSQYKNAGSKY 291
>Z72502-3|CAA96593.2| 218|Caenorhabditis elegans Hypothetical
protein C08B6.6 protein.
Length = 218
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = +2
Query: 164 YQSKAKMKEIMQLKNY-MANPITPVEQLEQNK-----DDMK-TQMELLIMRIQAEFCRAL 322
Y S +K E + K Y T V LEQ K + MK ELLI RI+ +
Sbjct: 16 YNSTSKTLEDLNSKYYDFQESDTDVNSLEQRKLISFLNFMKDNDRELLISRIR------I 69
Query: 323 EKEEDKEAKFTVDRW 367
++E++ +KF VD W
Sbjct: 70 DEEDNSLSKFLVDAW 84
>Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical
protein F22D6.12 protein.
Length = 436
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 482 QQMRSRGKNLQNAELPFFAAGVSAVIHPR 568
QQ R GKN + LP F + +SA+I PR
Sbjct: 240 QQARLTGKNENESPLPLFKSSLSAII-PR 267
>AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein.
Length = 436
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 482 QQMRSRGKNLQNAELPFFAAGVSAVIHPR 568
QQ R GKN + LP F + +SA+I PR
Sbjct: 240 QQARLTGKNENESPLPLFKSSLSAII-PR 267
>AY037799-1|AAK94764.1| 352|Caenorhabditis elegans GLY-19 protein.
Length = 352
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 482 QQMRSRGKNLQNAELPFFAAGVSAVIHPR 568
QQ R GKN + LP F + +SA+I PR
Sbjct: 156 QQARLTGKNENESPLPLFKSSLSAII-PR 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,266,902
Number of Sequences: 27780
Number of extensions: 381454
Number of successful extensions: 1283
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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