Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_D02
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.7  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   4.7  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   4.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.2  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 595 KWMVGTMGVPWVD 557
           KW  G  G PW+D
Sbjct: 346 KWANGQTGFPWID 358


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 449 LIYSLLLSQRLC 414
           L+YS+ +SQRLC
Sbjct: 10  LLYSVAMSQRLC 21


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 449 LIYSLLLSQRLC 414
           L+YS+ +SQRLC
Sbjct: 9   LLYSVAMSQRLC 20


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 42  YTFSKFSNAKLCW 80
           YTF +F N +L W
Sbjct: 795 YTFEQFHNKELLW 807


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 42  YTFSKFSNAKLCW 80
           YTF +F N +L W
Sbjct: 833 YTFEQFHNKELLW 845


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,170
Number of Sequences: 438
Number of extensions: 4408
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)