Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C23
         (838 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   6.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 764 RGXTXXXXCRVPTFAGQFARLRIIXG 687
           RG T    C +P+F   F R+    G
Sbjct: 136 RGNTAVLKCNIPSFVADFVRVEAWVG 161


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 556  YFKGTHEIPPXTTRIHHHPLGF*LKSGIQMYMKTEIFA---YRFST 684
            YF+  +EI    T +   P+GF       + M  + FA   +RF T
Sbjct: 1264 YFEDKNEIGVYITYLQLEPIGFVFLIFFALLMVIQFFAMMIHRFGT 1309


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 556  YFKGTHEIPPXTTRIHHHPLGF*LKSGIQMYMKTEIFA---YRFST 684
            YF+  +EI    T +   P+GF       + M  + FA   +RF T
Sbjct: 1264 YFEDKNEIGVYITYLQLEPIGFVFLIFFALLMVIQFFAMMIHRFGT 1309


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 606 VVNTGSXGGNFMCALEVSTLIKCI 535
           V+N    G NF+C L +  L  C+
Sbjct: 254 VLNILRVGKNFVCLLSLIILCDCV 277


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 635  PDFS*KPNGWW 603
            PD++ KP+ WW
Sbjct: 1033 PDWTTKPSTWW 1043


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 387 TLSVMYLFNLHYL 349
           TL V+Y FNL YL
Sbjct: 312 TLVVIYTFNLFYL 324


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 387 TLSVMYLFNLHYL 349
           TL V+Y FNL YL
Sbjct: 268 TLVVIYTFNLFYL 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,198
Number of Sequences: 336
Number of extensions: 4483
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)