Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C23
         (838 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)                      93   3e-19
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)              58   9e-09
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   2e-04
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)                 42   6e-04
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.031
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)                 35   0.071
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)                      35   0.071
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)                      35   0.071
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)                35   0.094
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)                32   0.50 
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)                32   0.50 
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)                 29   4.7  

>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 1282

 Score = 93.1 bits (221), Expect = 3e-19
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +3

Query: 615  RFLTKVWHPNVYENGDLCISILHPPXDDPQSGELPCERWNPT 740
            RFLTK+WHPN+YE+GD+CISILHPP DDPQSGELP ERWNPT
Sbjct: 1192 RFLTKMWHPNIYESGDVCISILHPPVDDPQSGELPSERWNPT 1233



 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 33/51 (64%), Positives = 36/51 (70%)
 Frame = +1

Query: 430  LEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
            LE K L EEPVEGF V++  E N FEW+VAIFGPP TLY GGYFK     P
Sbjct: 1131 LELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFP 1181


>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 473

 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +3

Query: 612 IRFLTKVWHPNVYENGDLCISILHPPXDDPQSGELPCERWNP 737
           + F++ +WHPNV++NG++CISILH P +D    E   ERW P
Sbjct: 399 LTFISDIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRP 440



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 21/46 (45%), Positives = 32/46 (69%)
 Frame = +1

Query: 445 LQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
           LQ++PVEGF   L  +++L++WE+ + GPP T Y+ GYFK +   P
Sbjct: 344 LQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFP 389


>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 385

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +1

Query: 490 EDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
           EDNLFEW   + GPPDT + GG + G   +PP
Sbjct: 35  EDNLFEWHFTVRGPPDTEFAGGRYHGRIILPP 66


>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
          Length = 123

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +1

Query: 493 DNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
           DNLFEW   + GPPDT + GG + G   +PP
Sbjct: 1   DNLFEWHFTVRGPPDTEFAGGRYHGRIILPP 31


>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 269

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 12/21 (57%), Positives = 19/21 (90%)
 Frame = +3

Query: 618 FLTKVWHPNVYENGDLCISIL 680
           FLTK++HPNV +NG++C++ L
Sbjct: 147 FLTKIFHPNVAKNGEICVNTL 167


>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
          Length = 200

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 493 DNLFEWEVAIFGPPDTLYQGGYF 561
           D+L+EW   I GPP ++Y+GG F
Sbjct: 162 DDLYEWYSTILGPPGSVYEGGVF 184


>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 226

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 493 DNLFEWEVAIFGPPDTLYQGGYF 561
           D+L+EW   I GPP ++Y+GG F
Sbjct: 122 DDLYEWYSTILGPPGSVYEGGVF 144


>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 145

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3

Query: 612 IRFLTKVWHPNVYENGDLCISILHP 686
           I F TK++HPN+ E G +C+ I+ P
Sbjct: 59  ITFKTKIYHPNIDEKGQVCLPIISP 83


>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
          Length = 181

 Score = 34.7 bits (76), Expect = 0.094
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 493 DNLFEWEVAIFGPPDTLYQGGYF 561
           D L+EW   I GPP ++Y+GG F
Sbjct: 49  DKLYEWYSTILGPPGSVYEGGVF 71


>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
          Length = 190

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 612 IRFLTKVWHPNVYENGDLCISILHPP 689
           +RF+T ++HPN+  +G +C+  L  P
Sbjct: 32  VRFVTPIYHPNIDSSGRICLDTLKMP 57


>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
          Length = 204

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 612 IRFLTKVWHPNVYENGDLCISILHPP 689
           +RF+T ++HPN+  +G +C+  L  P
Sbjct: 46  VRFVTPIYHPNIDSSGRICLDTLKMP 71


>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
          Length = 1604

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
 Frame = -1

Query: 565 P*SIHLDKVYPAVRRLPLPTQIDCPLLAI*HGNLLQVLLADSCTPTAKALRAEL-----V 401
           P  + L++  PAV RLP P  ++ P+ A+ H  L   L  +   P    L   L     V
Sbjct: 475 PTHLPLERPVPAVTRLPTPLPLERPVPAVTH--LPTDLPLERPVPAVTRLPTPLLLERPV 532

Query: 400 GTVLDIVSYVFIQPSLPI*TKLYKHITLE 314
             V  + +++ ++  +P  T+L  H+ LE
Sbjct: 533 PAVTHLPAHLPLEWPVPAVTRLPTHLPLE 561


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,547,319
Number of Sequences: 59808
Number of extensions: 556669
Number of successful extensions: 1170
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)