Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C23
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 93 3e-19
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 58 6e-09
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 58 6e-09
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 47 1e-05
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 42 7e-04
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 42 7e-04
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 39 0.005
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 38 0.007
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 38 0.007
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 36 0.027
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 34 0.11
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 33 0.25
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 33 0.25
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 33 0.25
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 33 0.33
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 32 0.58
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 31 1.0
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 29 4.1
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 29 4.1
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 29 4.1
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 5.4
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 5.4
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 28 7.2
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 28 7.2
U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astaci... 28 9.5
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 92.7 bits (220), Expect = 3e-19
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISILHPPXDDPQSGELPCERWNPT 740
++F TKVWHPNVYENGDLCISILH P DDPQSGEL CERWNPT
Sbjct: 76 MKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPT 118
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +1
Query: 430 LEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
+E K+LQ +PVEGF + + EDNLF W V I+GPP TLYQGGYFK + P
Sbjct: 17 MELKNLQSQPVEGFTIDV-NEDNLFVWTVGIYGPPKTLYQGGYFKASIRFP 66
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 58.4 bits (135), Expect = 6e-09
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +1
Query: 409 QPSGL*PLEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
Q S L + ++ PV+GF L+ ++++++WEV + GPPDTLY+GG+FK + P
Sbjct: 3 QSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFP 60
Score = 57.2 bits (132), Expect = 1e-08
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISILHPPXDDPQSGELPCERWNP 737
++F++++WHPN+ + G++CISILH P DD E P ERW P
Sbjct: 70 MKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLP 111
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 58.4 bits (135), Expect = 6e-09
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISILHPPXDDPQSGELPCERWNP 737
+RF ++HPN+Y +G +CISILH P DDP EL ERW+P
Sbjct: 71 MRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSP 112
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
EYK L P EG + EDN FEWE I GP +T + G F P
Sbjct: 12 EYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFP 61
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKG 567
+Y L ++PV+G + L EDN+ EW + G PDT + GGY+ G
Sbjct: 27 DYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWG 70
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
++K LQE+P G EDN+ WE IFGP +T ++ G FK
Sbjct: 12 DFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFK 54
Score = 36.3 bits (80), Expect = 0.027
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
++F++K++HPNVY +G +C+ IL
Sbjct: 70 VKFISKMFHPNVYADGSICLDIL 92
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
++K LQE+P G EDN+ WE IFGP +T ++ G FK
Sbjct: 12 DFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFK 54
Score = 36.3 bits (80), Expect = 0.027
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
++F++K++HPNVY +G +C+ IL
Sbjct: 70 VKFISKMFHPNVYADGSICLDIL 92
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
++ LTKVWHPN+ E+G +C+SIL
Sbjct: 94 VKCLTKVWHPNINEDGSICLSIL 116
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKG 567
+Y+ L +EPV + L E N+ EW I G P T Y+GG + G
Sbjct: 16 DYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMG 59
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 493 DNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
D+LF W+ I GPP++ YQGG F T P
Sbjct: 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFP 57
Score = 33.9 bits (74), Expect = 0.14
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F T+++HPN+ NG +C+ IL
Sbjct: 67 VAFTTRIYHPNINSNGSICLDIL 89
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 493 DNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
D+LF W+ I GPP++ YQGG F T P
Sbjct: 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFP 57
Score = 33.9 bits (74), Expect = 0.14
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F T+++HPN+ NG +C+ IL
Sbjct: 67 VAFTTRIYHPNINSNGSICLDIL 89
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 36.3 bits (80), Expect = 0.027
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 493 DNLFEWEVAIFGPPDTLYQGGYF 561
D+L+ W+ I GPP++ YQGG F
Sbjct: 28 DDLYHWQATIMGPPESPYQGGIF 50
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 34.3 bits (75), Expect = 0.11
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RF+TK++HPN+ + G +C+ IL
Sbjct: 70 VRFMTKIYHPNIDKLGRICLDIL 92
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 487 GEDNLFEWEVAIFGPPDTLYQGGYFK 564
G NLF WE AI G DT+++GG ++
Sbjct: 34 GTLNLFNWECAIPGRKDTIWEGGLYR 59
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 615 RFLTKVWHPNVYENGDLCISILHPPXD 695
+F ++HPNVY +G +C+S+L D
Sbjct: 76 KFEPPLFHPNVYPSGTVCLSLLDENKD 102
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 454 EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKG 567
+P E + + + EDNLFEW I G T ++GG + G
Sbjct: 24 QPTEMYHAQPM-EDNLFEWHFTIRGTLGTDFEGGIYHG 60
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 487 GEDNLFEWEVAIFGPPDTLYQGGYFK 564
G NLF WE AI G DT+++GG ++
Sbjct: 34 GTLNLFNWECAIPGRKDTIWEGGLYR 59
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 615 RFLTKVWHPNVYENGDLCISILHPPXD 695
+F ++HPNVY +G +C+S+L D
Sbjct: 76 KFEPPLFHPNVYPSGTVCLSLLDENKD 102
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +3
Query: 612 IRFLTKVWHPNV-YENGDLCISIL 680
++F TK+WHPNV + G +C+ IL
Sbjct: 73 VKFSTKIWHPNVSSQTGVICLDIL 96
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 466 GFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
G +++L E NL E + I GPPDT Y GG F +IP
Sbjct: 26 GIMIEILNE-NLTEIKGHIRGPPDTPYAGGMFDLDIKIP 63
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 31.9 bits (69), Expect = 0.58
Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +3
Query: 615 RFLTKVWHPNV-YENGDLCISIL 680
+F+T++WHPN+ + G +C+ IL
Sbjct: 103 KFVTRIWHPNISSQTGTICLDIL 125
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TK++HPNV E G C+ I+
Sbjct: 68 VAFETKIYHPNVDEEGKFCLPIV 90
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/21 (42%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +3
Query: 612 IRFLTKVWHPNVYE-NGDLCI 671
++F+TK+WHP+V +G +C+
Sbjct: 415 VKFITKIWHPSVSPFDGTICL 435
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 633 WHPNVYENGDLCISILHPPXDDPQSGELPCERWNP 737
++PN+Y +G +C+SIL P+ E+WNP
Sbjct: 491 FNPNLYNDGKICLSILGTWEGRPE------EKWNP 519
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 636 HPNVYENGDLCISIL 680
HP++Y NG +C+SIL
Sbjct: 82 HPHIYSNGHICLSIL 96
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDN-LFEWEVAIFGPPDTLYQGGYF 561
E L+ E EG V N L +W++ + G TLY G F
Sbjct: 12 ELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVF 55
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -3
Query: 542 SVSGGPKIATSHSNRLSSPSNLTRKPSTGSSCRLLYSNG*SPEG*TRW--NSVR-HCQLC 372
S P I+ SSPS+ ++ PS G SC L G P RW N VR C+L
Sbjct: 46 SSQNNPPISYHQYATASSPSSRSQPPS-GQSCTLPRQIGTGPYRIPRWYYNPVRGRCELF 104
Query: 371 IYS 363
+S
Sbjct: 105 YWS 107
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -3
Query: 542 SVSGGPKIATSHSNRLSSPSNLTRKPSTGSSCRLLYSNG*SPEG*TRW--NSVR-HCQLC 372
S P I+ SSPS+ ++ PS G SC L G P RW N VR C+L
Sbjct: 46 SSQNNPPISYHQYATASSPSSRSQPPS-GQSCTLPRQIGTGPYRIPRWYYNPVRGRCELF 104
Query: 371 IYS 363
+S
Sbjct: 105 YWS 107
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 521 IATSHSNRLSSPSNLTRKPSTGSSCRLLYSN 429
+ +SN + SP+N +TG+SC +L+S+
Sbjct: 12 VGQPYSNLVISPNNRILATTTGASCEVLFSD 42
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/25 (40%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 612 IRFLTKVWHPNVYE-NGDLCISILH 683
I FL K++HPN+ E +G +C+ +++
Sbjct: 69 IGFLNKIFHPNIDEASGTVCLDVIN 93
>U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astacin
protease protein 4 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 289 PGISTRHNNNELEILVNIASILQHPQV 209
PG+S +NNN +N SI+ HPQV
Sbjct: 290 PGVSGNNNNNNNN-QINSNSIVNHPQV 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,877,215
Number of Sequences: 27780
Number of extensions: 413523
Number of successful extensions: 943
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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