Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C23
(838 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 69 4e-12
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 69 5e-12
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 67 1e-11
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 47 1e-05
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 44 1e-04
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 42 5e-04
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 42 5e-04
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 42 5e-04
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 42 5e-04
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 40 0.002
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 40 0.002
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 40 0.002
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 40 0.002
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 40 0.002
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 39 0.004
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 39 0.004
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 39 0.005
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 38 0.006
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 38 0.008
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 38 0.008
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 38 0.008
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 37 0.014
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 37 0.014
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 35 0.058
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 35 0.058
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 35 0.058
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 35 0.058
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 35 0.058
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 34 0.13
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 34 0.13
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 32 0.41
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 32 0.41
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 32 0.41
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 32 0.54
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 32 0.54
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 31 0.72
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 31 0.72
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 31 0.95
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 31 1.3
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 30 1.7
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 30 2.2
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 30 2.2
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 30 2.2
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 29 2.9
At2g37400.1 68415.m04586 chloroplast lumen common family protein... 29 5.1
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 28 6.7
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 28 6.7
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 68.9 bits (161), Expect = 4e-12
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISILHPPXDDPQSGELPCERWNP 737
+RF + +WHPNVY +G +CISILHPP DDP EL ERW P
Sbjct: 71 VRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTP 112
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
+ K L + PV+GF L+ E N+FEW V I GPPDTLY+GG+F P
Sbjct: 12 QLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFP 61
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 68.5 bits (160), Expect = 5e-12
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISILHPPXDDPQSGELPCERWNP 737
+RF + +WHPNVY +G +CISILHPP DDP EL ERW P
Sbjct: 103 VRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTP 144
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 496 NLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
N+FEW V I GPPDTLY+GG+F P
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFP 93
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 67.3 bits (157), Expect = 1e-11
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISILHPPXDDPQSGELPCERWNP 737
+ F +++WHPNVY +G +CISILHPP DDP EL ERW P
Sbjct: 72 VTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTP 113
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +1
Query: 409 QPSGL*PLEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
Q S L + K L ++PV+GF L+ E N+F+W V+I GPPDTLY+GG+F P
Sbjct: 5 QASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFP 62
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
E K +Q P + F + L E+N+FEW+ AI GP DT ++GG + G ++P
Sbjct: 19 EVKEMQANPSDDF-MSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLP 67
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGED-NLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
EYK +Q E V ++L+ +D N+F+W I GP +T Y+GG F+ +P
Sbjct: 11 EYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
Score = 35.9 bits (79), Expect = 0.033
Identities = 13/24 (54%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
Frame = +3
Query: 612 IRFLTKVWHPNV-YENGDLCISIL 680
+RFLTK++HPNV ++ G++C+ IL
Sbjct: 71 VRFLTKIFHPNVHFKTGEICLDIL 94
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GP D+ Y GG F T PP
Sbjct: 39 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPP 88
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 97 VAFRTKVFHPNINSNGSICLDIL 119
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GP D+ Y GG F T PP
Sbjct: 9 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPP 58
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VAFRTKVFHPNINSNGSICLDIL 89
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GPP++ Y GG F + PP
Sbjct: 9 ELKDLQKDPPSNCSAGPVAED-MFHWQATIMGPPESPYAGGVFLVSIHFPP 58
Score = 35.1 bits (77), Expect = 0.058
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VSFKTKVYHPNINSNGSICLDIL 89
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GP D+ Y GG F T PP
Sbjct: 9 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPP 58
Score = 35.1 bits (77), Expect = 0.058
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPNV NG +C+ IL
Sbjct: 67 VAFRTKVFHPNVNSNGSICLDIL 89
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GP ++ Y GG F T PP
Sbjct: 9 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPP 58
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VAFRTKVFHPNINSNGSICLDIL 89
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GP ++ Y GG F T PP
Sbjct: 9 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPP 58
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VAFRTKVFHPNINSNGSICLDIL 89
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GP ++ Y GG F T PP
Sbjct: 9 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPP 58
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VAFRTKVFHPNINSNGSICLDIL 89
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GP ++ Y GG F T PP
Sbjct: 9 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSESPYAGGVFLVTIHFPP 58
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VAFRTKVFHPNINSNGSICLDIL 89
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P + ED +F W+ I GP ++ Y GG F T PP
Sbjct: 9 ELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSESPYAGGVFLVTIHFPP 58
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VAFRTKVFHPNINSNGSICLDIL 89
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E + LQ +P G+D +F+W+ I GP D+ + GG F T PP
Sbjct: 9 ELRDLQRDPPVSCSAGPTGDD-MFQWQATIMGPADSPFAGGVFLVTIHFPP 58
Score = 35.1 bits (77), Expect = 0.058
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VAFRTKVYHPNINSNGSICLDIL 89
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E + LQ +P G+D +F+W+ I GP D+ + GG F T PP
Sbjct: 9 ELRDLQRDPPVSCSAGPTGDD-MFQWQATIMGPADSPFAGGVFLVTIHFPP 58
Score = 35.1 bits (77), Expect = 0.058
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 67 VAFRTKVYHPNINSNGSICLDIL 89
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ +P GED +F W+ I GP ++ Y GG F PP
Sbjct: 9 ELKELQRDPPVSCSAGPTGED-MFHWQATIMGPNESPYSGGVFLVNIHFPP 58
Score = 34.3 bits (75), Expect = 0.10
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 618 FLTKVWHPNVYENGDLCISIL 680
F TKV+HPN+ NG++C+ IL
Sbjct: 69 FRTKVFHPNINSNGNICLDIL 89
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGT 570
++K LQ++P G ++N+ W IFGP DT + GG FK T
Sbjct: 12 DFKRLQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLT 56
Score = 35.5 bits (78), Expect = 0.044
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RF+++++HPN+Y +G +C+ IL
Sbjct: 70 VRFVSRMFHPNIYADGSICLDIL 92
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
++K LQ++P G ++N+ W IFGP DT + GG FK
Sbjct: 12 DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFK 54
Score = 35.5 bits (78), Expect = 0.044
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RF+++++HPN+Y +G +C+ IL
Sbjct: 70 VRFVSRMFHPNIYADGSICLDIL 92
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
++K LQ++P G ++N+ W IFGP DT + GG FK
Sbjct: 12 DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFK 54
Score = 35.5 bits (78), Expect = 0.044
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RF+++++HPN+Y +G +C+ IL
Sbjct: 70 VRFVSRMFHPNIYADGSICLDIL 92
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
++K LQ++P G ++N+ W IFGP DT + GG FK
Sbjct: 12 DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFK 54
Score = 35.5 bits (78), Expect = 0.044
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RF+++++HPN+Y +G +C+ IL
Sbjct: 70 VRFVSRMFHPNIYADGSICLDIL 92
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
E K LQ++P +++F W+ I GP ++ Y GG F T PP
Sbjct: 9 ELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPP 59
Score = 34.7 bits (76), Expect = 0.077
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ NG +C+ IL
Sbjct: 68 VAFRTKVFHPNINSNGSICLDIL 90
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYF 561
E + +Q P + E+++F W+ I GP D+ Y GG F
Sbjct: 9 ELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVF 51
Score = 32.7 bits (71), Expect = 0.31
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+ F TKV+HPN+ G +C+ IL
Sbjct: 68 VNFKTKVYHPNIDSKGSICLDIL 90
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 35.1 bits (77), Expect = 0.058
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 618 FLTKVWHPNVYENGDLCISIL 680
F+TK++HPNV NG++C++ L
Sbjct: 78 FMTKIFHPNVASNGEICVNTL 98
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
E KSL E P +G +V ++ +++ + I GP T Y+ G F+
Sbjct: 18 ELKSLDESPPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFR 60
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 35.1 bits (77), Expect = 0.058
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RFLTK++HPN+ + G +C+ IL
Sbjct: 71 VRFLTKIYHPNIDKLGRICLDIL 93
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
E + L EP G EDN+ + V I GP + Y+GG FK
Sbjct: 13 ETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFK 55
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 35.1 bits (77), Expect = 0.058
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RFLTK++HPN+ + G +C+ IL
Sbjct: 71 VRFLTKIYHPNIDKLGRICLDIL 93
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
E + L EP G EDN+ + V I GP + Y+GG FK
Sbjct: 13 ETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFK 55
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 35.1 bits (77), Expect = 0.058
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RFLTK++HPN+ + G +C+ IL
Sbjct: 71 VRFLTKIYHPNIDKLGRICLDIL 93
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFK 564
E + L EP G E+N+ + V I GP + Y+GG FK
Sbjct: 13 ETQRLLSEPAPGISASP-SEENMRYFNVMILGPTQSPYEGGVFK 55
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 35.1 bits (77), Expect = 0.058
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
+RFLTK++HPN+ + G +C+ IL
Sbjct: 38 VRFLTKIYHPNIDKLGRICLDIL 60
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
EY++L +EPV V +++ EW + G T + GG++ G + PP
Sbjct: 13 EYRALCKEPVSHV-VARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPP 62
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
EY++L +EPV V +++ EW + G T + GG++ G + PP
Sbjct: 13 EYRALCKEPVSHV-VARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPP 62
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/24 (50%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = +3
Query: 612 IRFLTKVWHPNV-YENGDLCISIL 680
++F TKVWHPN+ ++G +C+ IL
Sbjct: 69 MQFSTKVWHPNISSQSGAICLDIL 92
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 493 DNLFEWEVAIFGPPDTLYQGGYF 561
DNL+ W I GP T Y+GG F
Sbjct: 63 DNLYHWIATIIGPSGTPYEGGIF 85
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
E Q P GFR K+ DNL +W + + G P TLY ++ E P
Sbjct: 23 ELSEWQLNPPTGFRHKVT--DNLQKWTIDVTGAPGTLYANETYQLQVEFP 70
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 636 HPNVYENGDLCISILH 683
HP++Y NG +C+ IL+
Sbjct: 89 HPHIYSNGHICLDILY 104
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
E+ Q P GF+ ++ DNL W + + G P TLY ++ E P
Sbjct: 23 EFMEWQTNPPSGFKHRV--SDNLQRWIIEVHGVPGTLYANETYQLQVEFP 70
Score = 27.9 bits (59), Expect = 8.8
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 636 HPNVYENGDLCISILH 683
HP++Y NG +C+ +L+
Sbjct: 89 HPHIYSNGHICLDVLY 104
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 493 DNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
+N++EW I GP T Y+GG F + + P
Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFP 63
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 618 FLTKVWHPNVYENGDLCISIL 680
F T ++HPN+ + G +C++IL
Sbjct: 75 FKTPIYHPNINDEGSICMNIL 95
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 31.5 bits (68), Expect = 0.72
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISILHPP 689
+ F T ++HPN+ +G +C+ IL+ P
Sbjct: 81 VSFATPIYHPNIDNSGRICLDILNLP 106
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 493 DNLFEWEVAIFGPPDTLYQGGYFKGTHEIPP 585
+N+F WE + GP Y+ G F + IPP
Sbjct: 57 ENIFRWEATVNGPVGCPYEKGVFTVSVHIPP 87
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
I F TK++HPN+ E G++ + IL
Sbjct: 96 ITFKTKIFHPNISEIGEIFVDIL 118
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 493 DNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
D + E+ V GP D+LYQGG +K E+P
Sbjct: 27 DGMQEFYVEFNGPKDSLYQGGVWKIRVELP 56
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/25 (40%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 612 IRFLTKVWHPNVYE-NGDLCISILH 683
+ F+TK++HPNV E +G +C+ +++
Sbjct: 66 VGFITKIYHPNVDELSGSVCLDVIN 90
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 493 DNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
D+L + V GP D+LYQGG +K E+P
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELP 56
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 469 FRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
++V+++ D + E+ V GP D++Y+GG +K E+P
Sbjct: 20 YKVEMIN-DGMQEFFVEFSGPKDSIYEGGVWKIRVELP 56
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/25 (40%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 612 IRFLTKVWHPNVYE-NGDLCISILH 683
+ F+TK++HPNV E +G +C+ +++
Sbjct: 66 VGFITKIYHPNVDEMSGSVCLDVIN 90
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 433 EYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
E Q P GF+ ++ DNL +W + + G P TLY + E P
Sbjct: 23 ELSEWQVNPPTGFKHRVT--DNLQKWVIEVTGAPGTLYANETYNLQVEFP 70
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 636 HPNVYENGDLCISILH 683
HP++Y NG +C+ IL+
Sbjct: 89 HPHIYSNGHICLDILY 104
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 615 RFLTKVWHPNVYENGDLCISILH 683
+F +HPNVY +G +C+SIL+
Sbjct: 77 KFPQGFFHPNVYPSGTVCLSILN 99
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 448 QEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKGTHEIP 582
Q P GF+ K+ DNL W + + G P TLY ++ + P
Sbjct: 28 QMNPPTGFKHKVT--DNLQRWIIEVIGAPGTLYANDTYQLQVDFP 70
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 636 HPNVYENGDLCISILH 683
HP++Y NG +C+ IL+
Sbjct: 89 HPHIYSNGHICLDILY 104
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 612 IRFLTKVWHPNVYENGDLCISIL 680
++ TKV+HPN+ G++C++IL
Sbjct: 96 VKCKTKVYHPNIDLEGNVCLNIL 118
>At2g37400.1 68415.m04586 chloroplast lumen common family protein
very similar to GI:6729507 (At5g02590) and GI:7413648
(At3g53560) [Arabidopsis thaliana]
Length = 333
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -3
Query: 299 HVSTRHFNSSQ*QRTRNFGKHSIDTAASTSTCHTLQTSTLKS 174
H+S HF+SS ++ +F S+ + S+ C +++ S+ KS
Sbjct: 15 HLSFTHFSSSFPKKPSSFSLRSLPRSTSSFKCISIKASSSKS 56
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 490 EDNLFEWEVAIFGPPDTLYQGGYFK 564
EDN+F W+ I G DT+++G ++
Sbjct: 62 EDNIFCWKGTITGSKDTVFEGTEYR 86
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 490 EDNLFEWEVAIFGPPDTLYQGGYFK 564
EDN+F W+ I G DT+++G ++
Sbjct: 61 EDNIFCWKGTITGSKDTVFEGTEYR 85
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,634,105
Number of Sequences: 28952
Number of extensions: 380193
Number of successful extensions: 869
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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