Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C21
(868 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 270 1e-72
10_02_0022 - 4290708-4290788,4291254-4291305,4291396-4291484,429... 248 6e-66
06_01_0262 - 1930552-1930632,1931096-1931152,1931236-1931287,193... 225 5e-59
03_02_0365 - 7816966-7817046,7817441-7817492,7817590-7817678,781... 132 1e-44
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877... 174 7e-44
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 29 4.8
01_01_0796 + 6190931-6192745 29 6.4
>09_03_0117 -
12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 270 bits (662), Expect = 1e-72
Identities = 134/204 (65%), Positives = 161/204 (78%), Gaps = 1/204 (0%)
Frame = +2
Query: 119 VIKSIKARQIFDSRGNPTVEVDLVTELG-LFRAAVPSGASTGVHEALELRDNIKSEYHGK 295
V++SI+ARQI DSRGNPTVEVDLV G L R+AVPSGASTG++EALELRD + Y GK
Sbjct: 50 VVRSIRARQIVDSRGNPTVEVDLVAGDGRLHRSAVPSGASTGIYEALELRDGDGAAYGGK 109
Query: 296 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 475
GVL A++NINE+IAP+L ++V Q ++D +ML +DGT NKSKLGANAILGVSL
Sbjct: 110 GVLNAVRNINEVIAPKLV--GVDVRNQSDVDAIMLDIDGTPNKSKLGANAILGVSLSVCR 167
Query: 476 XXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSE 655
VPLYKH+ +LAG ++V+PVPAFNVINGGSHAGN LAMQEFM+ P GAS+FSE
Sbjct: 168 AGAGAKEVPLYKHIQELAGTKELVMPVPAFNVINGGSHAGNNLAMQEFMLLPVGASSFSE 227
Query: 656 AMRMGSEVYHHLKKIIKEKFGLDS 727
A+RMGSEVYH LK IIK K+G D+
Sbjct: 228 ALRMGSEVYHALKGIIKAKYGQDA 251
>10_02_0022 -
4290708-4290788,4291254-4291305,4291396-4291484,
4291565-4291615,4291699-4291893,4292010-4292090,
4292190-4292252,4292480-4292554,4292630-4292710,
4292784-4292888,4292977-4293057,4293156-4293242,
4293322-4293369,4293923-4293987,4294109-4294172,
4294828-4294896
Length = 428
Score = 248 bits (606), Expect = 6e-66
Identities = 133/211 (63%), Positives = 158/211 (74%), Gaps = 8/211 (3%)
Frame = +2
Query: 122 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 298
I S+KARQIFDSRGNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKG
Sbjct: 5 IVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKG 63
Query: 299 VLTAIKNINELIAPELTKANLEVTQQREIDELMLK-LDGTEN-----KSKLGANAILGVS 460
V A+ N+N +IAP L + T Q E+D M++ LDGT+N K KLGANAIL VS
Sbjct: 64 VSKAVDNVNSVIAPALI--GKDPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVS 121
Query: 461 LXXXXXXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQ-EFMIFPTG 637
L +PLY+H+A+LAGN +VLPVPAFNVINGGSHAGNKLAMQ EFMI PTG
Sbjct: 122 LAICKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQAEFMILPTG 181
Query: 638 ASTFSEAMRMGSEVYHHLKKIIKEKFGLDST 730
A++F EAM+MG EVYH+LK +IK+K+G D+T
Sbjct: 182 AASFKEAMKMGVEVYHNLKSVIKKKYGQDAT 212
>06_01_0262 -
1930552-1930632,1931096-1931152,1931236-1931287,
1931373-1931461,1931551-1931601,1931696-1931890,
1932015-1932095,1932205-1932267,1933045-1933119,
1933194-1933352,1933353-1933463,1933536-1933616,
1933721-1933807,1933920-1933967,1934357-1934421,
1935002-1935065,1935220-1935288
Length = 475
Score = 225 bits (549), Expect = 5e-59
Identities = 134/243 (55%), Positives = 160/243 (65%), Gaps = 36/243 (14%)
Frame = +2
Query: 110 LKMVIKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEY 286
+ + I+S+KARQIFDSRGNPTVEVD+ G F R AVPSGASTG++EALELRD S+Y
Sbjct: 1 MAVTIQSVKARQIFDSRGNPTVEVDVGLSDGSFARGAVPSGASTGIYEALELRDG-GSDY 59
Query: 287 HGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLK-LDGTEN-----KSKLGANAI 448
GKGVL A+ N+N +I P L + T+Q +ID M++ LDGT N K KLGANAI
Sbjct: 60 LGKGVLKAVSNVNTIIGPALI--GKDPTEQVDIDNFMVQQLDGTSNNWGWCKQKLGANAI 117
Query: 449 LGVSLXXXXXXXXXXNVPLYK---HLADLAGNNDIVLPVPAFNVINGGSHAGNKLAM--- 610
L VSL +PLY+ H+A+LAGN +VLPVPAFNVINGGSHAGNKLAM
Sbjct: 118 LAVSLAVCKAGAMVKKIPLYQKLQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQVK 177
Query: 611 -----------------------QEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGL 721
QEFMI PTGAS+F EAM+MG EVYHHLK IIK+K+G
Sbjct: 178 YCLNNKTMSMHDSVIFSAHLAAVQEFMILPTGASSFKEAMKMGVEVYHHLKSIIKKKYGQ 237
Query: 722 DST 730
D+T
Sbjct: 238 DAT 240
>03_02_0365 -
7816966-7817046,7817441-7817492,7817590-7817678,
7817762-7817854,7817900-7818094,7818172-7818249,
7818353-7818415,7818806-7818880,7818958-7819038,
7819329-7819409,7819516-7819602,7819682-7819729,
7820317-7820381,7820566-7820629,7821254-7821322
Length = 406
Score = 132 bits (319), Expect(2) = 1e-44
Identities = 78/137 (56%), Positives = 93/137 (67%), Gaps = 7/137 (5%)
Frame = +2
Query: 122 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 298
I+S+KARQIFDSRGNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKG
Sbjct: 5 IQSVKARQIFDSRGNPTVEVDICCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKG 63
Query: 299 VLTAIKNINELIAPELTKANLEVTQQREIDELML-KLDGTEN-----KSKLGANAILGVS 460
VL A+ N+N +I P L + T+Q ID M+ +LDGT+N K KLGANAIL VS
Sbjct: 64 VLKAVDNVNSIIGPAL--IGKDPTEQTVIDNFMVQQLDGTKNEWGWCKQKLGANAILAVS 121
Query: 461 LXXXXXXXXXXNVPLYK 511
L +PLY+
Sbjct: 122 LALCKAGAIIKKIPLYQ 138
Score = 66.1 bits (154), Expect(2) = 1e-44
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = +2
Query: 611 QEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDST 730
QEFMI PTGAS+F EAM+MG EVYH+LK +IK+K+G D+T
Sbjct: 138 QEFMILPTGASSFKEAMKMGVEVYHNLKSVIKKKYGQDAT 177
>03_02_0477 -
8770905-8770985,8771164-8771361,8771939-8772025,
8772094-8772179,8772270-8772368,8772431-8772551,
8773251-8773331,8773643-8773723,8773972-8774088,
8774185-8774256,8774621-8775055
Length = 485
Score = 174 bits (424), Expect = 7e-44
Identities = 91/217 (41%), Positives = 132/217 (60%)
Frame = +2
Query: 77 ISLNLRKSSSVLKMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEAL 256
IS ++R+++ VI S++ARQI D RG P VEV L T + RA+ + + A
Sbjct: 35 ISNHMRRAAPA---VITSVRARQILDGRGEPAVEVSLHTNKAVHRASAAAADAPEGAAAD 91
Query: 257 ELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLG 436
+RD K + + V A++ IN+ ++ L ++ QQ +ID+ ++ LD +K+++G
Sbjct: 92 AVRDAEKRKLLARAVADAVRVINDKVSEALV--GMDPQQQSQIDQAIMDLDKAHHKAEIG 149
Query: 437 ANAILGVSLXXXXXXXXXXNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQE 616
N++L VS+ VPLYKH+A+L G + LP+PA VINGG+HAGN L +QE
Sbjct: 150 VNSMLAVSIAACKAGAAEKEVPLYKHIAELVGKSATTLPIPAITVINGGTHAGNSLPIQE 209
Query: 617 FMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDS 727
MI P GA F EAM+MGSE YHHLK II EK+G +S
Sbjct: 210 IMILPVGAKNFEEAMQMGSETYHHLKDIILEKYGSNS 246
>07_03_0627 - 20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 200 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPE 343
GL +A + SGA + A+E D+ YHG V +++N +IA +
Sbjct: 1124 GLVKAFMDSGAKAVISSAMEPPDSQSIVYHGMEVNGSLENGKFVIADD 1171
>01_01_0796 + 6190931-6192745
Length = 604
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 200 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQR 379
GLF+ A TG A+ + D +S++H G T ++ ++ ++ +A E
Sbjct: 29 GLFKCASDLSILTGASVAVVIEDQNRSKFHAVGTPTVQAVVDAALSSDVEEAAAEARPVA 88
Query: 380 EIDELMLKLDGTENK 424
+ ++LM ++ E +
Sbjct: 89 D-EQLMERIAPLERE 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,270,927
Number of Sequences: 37544
Number of extensions: 426458
Number of successful extensions: 892
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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