Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C20
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   4.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   7.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   7.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.2  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 4   WIHTIMNSPYAKLYNPENVYLSKHGGGAGN 93
           W HT+  + Y   YN ++ Y      G GN
Sbjct: 65  WYHTLSKACYDCPYNTQDCYREDCIPGDGN 94


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 88  GNNWASGYAQGEKLNE 135
           GNNW S Y   +K+ E
Sbjct: 485 GNNWCSPYIGWQKVYE 500


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 356 TKSCMAELRHHLFHLSLGRHCMS 288
           T S + ELR++ FH+ L  +  S
Sbjct: 320 TPSILHELRNNYFHMDLENNVQS 342


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 199 IKQSPQGYHSHQPLC*LYQILPHSI 125
           IK SP+  H  Q L  +Y+IL  +I
Sbjct: 602 IKTSPKMRHELQKLAQVYRILGETI 626


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -1

Query: 190 SPQGYHSHQPLC*LY-QILPHSISPPEHILKPSCSLHP 80
           +P   H  QP    Y Q+ P  ++P  H+  P+   HP
Sbjct: 59  APAPGHGLQPTMGDYTQLQPQRLAPT-HLQSPNTQTHP 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,107
Number of Sequences: 336
Number of extensions: 4093
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)