Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C17
         (851 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    36   0.002
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.2  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            25   3.9  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    24   5.1  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.9  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 348 IPYPVEKKIPYPVKVHVPQPYPV 416
           +P+PV   +P+ VKV++PQPYP+
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPL 200



 Score = 30.3 bits (65), Expect = 0.078
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 6/28 (21%)
 Frame = +3

Query: 351 PYPVEKKIPYPV------KVHVPQPYPV 416
           PYP+E + P+PV      +V VP+PYPV
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPV 258



 Score = 28.7 bits (61), Expect = 0.24
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 348 IPYPVEKKIPYPVKVHVPQPYPVCQTCPLP 437
           +PY VEK  PYP++V  P P  V +   +P
Sbjct: 224 VPYTVEK--PYPIEVEKPFPVEVLKKFEVP 251



 Score = 27.9 bits (59), Expect = 0.41
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 643 LPRKGPVHVPAPYPVYKEVQVPVKVMWTDPTPCISQTSALPRREXRPIP 789
           +P    V++P PYP+   V+ P+K+      P + +   +P    +P P
Sbjct: 186 VPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIE-KPVPYTVEKPYP 233



 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 348 IPYPVEKKIPYPVKVHVPQPYPVCQTCPLP 437
           IP  +EK +PY V     +PYP+    P P
Sbjct: 216 IPKVIEKPVPYTV----EKPYPIEVEKPFP 241



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 351 PYPVEKKIPYPVKVHVPQPYPVCQTCPLP 437
           PYP++  +  P+K+ + +  P     P+P
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVP 225


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 357 PVEKKIPYPVKVHVPQPYPV 416
           PV   +PYP+ + +P P PV
Sbjct: 625 PVTILVPYPIIIPLPLPIPV 644



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 348 IPYPVEKKIPYPVKVHVP 401
           +PYP+   +P P+ V +P
Sbjct: 630 VPYPIIIPLPLPIPVPIP 647


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 555 HIYLDGDGSVDWDMYWVRHLLFDWV 481
           +I+L  DGS+ W    VR LLF+ V
Sbjct: 78  NIFLKTDGSLLWKNKPVRELLFEGV 102


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 741 HIPNQCLTPSRXPSHT 788
           HIP   L P R P+HT
Sbjct: 18  HIPTXVLDPLRVPNHT 33


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 483 PSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFMFQS 599
           P+R+     ST P+   R R     + LPR +R F F S
Sbjct: 275 PARRRSR--STRPTSWPRSRPTSKPKRLPRRRRPFFFSS 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,233
Number of Sequences: 2352
Number of extensions: 12747
Number of successful extensions: 87
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)