Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C14
(842 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 111 1e-25
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 77 2e-15
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 59 9e-10
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 43 5e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 39 8e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 37 0.003
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.009
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.15
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.4
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 28 1.4
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 28 1.9
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 4.4
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 27 4.4
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 26 5.8
SPBC146.10 |mug57||meiotically upregulated gene Mug57|Schizosacc... 26 5.8
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 26 7.7
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 7.7
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 111 bits (267), Expect = 1e-25
Identities = 52/121 (42%), Positives = 77/121 (63%)
Frame = +3
Query: 132 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPP 311
+ C +AE V + + +++ +V FYAPWCGHCK L PEY AA L+ D
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKD--G 72
Query: 312 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 491
++L +VDCTE G C ++S+ GYPTL +F+ G+ S+Y+GPR+ + +VKYMR Q+ P+
Sbjct: 73 ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131
Query: 492 K 494
K
Sbjct: 132 K 132
Score = 65.3 bits (152), Expect = 1e-11
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +3
Query: 147 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALA 323
++ED++ L +F V+ + LV FYAPWCGHCK L P Y A D V +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDD-SNVVVA 411
Query: 324 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS--EYNGPR 440
K+D TE S S+SG+PT+ F+ + + Y G R
Sbjct: 412 KIDATENDISV----SISGFPTIMFFKANDKVNPVRYEGDR 448
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 77.4 bits (182), Expect = 2e-15
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Frame = +3
Query: 69 KAPAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 248
+ P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+
Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62
Query: 249 CKRLKPEYAVAAGLLKTDVPPVALAKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE- 413
CK+L P Y A L + +P A VDC + ++ C Q+ V G+PT+K+ KG
Sbjct: 63 CKKLVPTYQKLASNLHSLLPVTA---VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSS 119
Query: 414 -LSSEYNGPRESNGIVKYM 467
S++YNG R + K++
Sbjct: 120 LSSTDYNGDRSYKSLQKFV 138
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 58.8 bits (136), Expect = 9e-10
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +3
Query: 156 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVD 332
+V++L +F V+ LV FYA WCG+CKRL P Y + K + P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNE-PNVEIVKIN 199
Query: 333 CTEGGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVG 482
+ V+ +PT+K F K + Y G R +++Y+ + G
Sbjct: 200 -ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
Score = 56.8 bits (131), Expect = 4e-09
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 213 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTL 392
AL+ FYA WCGHCK L P Y G L D V + K+D + +++ ++G+PTL
Sbjct: 42 ALIEFYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTL 99
Query: 393 KIF-RKGELSSEYNGPRESNGIVKYMRAQVG 482
F G +Y+ R+ + + +++ + G
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTG 130
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 43.2 bits (97), Expect = 5e-05
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +3
Query: 168 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDV--PPVALAKVDCTE 341
LTD+D + +S+ T + +Y P CG CKRL P + K V +VDC++
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 342 GGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSS 491
S+C ++ PTL +++ GE+ E + ++ ++ + P +
Sbjct: 90 -ELSSCA--NIRAVPTLYLYQNGEIVEEVPFGASTSEASLLDFVETHLNPDT 138
Score = 39.9 bits (89), Expect = 4e-04
Identities = 24/97 (24%), Positives = 44/97 (45%)
Frame = +3
Query: 174 DSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKS 353
D+D A L+ + + FY+ C C + + A ++ + +A ++C K
Sbjct: 288 DADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLN---VAHINCAVS-KR 343
Query: 354 TCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKY 464
C+Q+S+ +PT +F K E EY G +V +
Sbjct: 344 ACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSF 379
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 39.1 bits (87), Expect = 8e-04
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +3
Query: 177 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKST 356
S+F +++ Q +V F+A WCG CK + P++ KVD + +
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFE----QFSNTYSDATFIKVDVDQLSEIA 64
Query: 357 CEQFSVSGYPTLKIFRKGELSSEYNG 434
E V P+ +++ GE E G
Sbjct: 65 AEA-GVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +3
Query: 180 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTC 359
D++ +S +V FYA WCG CK LKP L + V+ +
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVN-ADKFSDIA 81
Query: 360 EQFSVSGYPTLKIFRKGE 413
++ V PT+ +FRKG+
Sbjct: 82 QKNGVYALPTMVLFRKGQ 99
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.5 bits (78), Expect = 0.009
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +3
Query: 228 YAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK 407
YA WCG CK + P ++ A K P AKV+ E + V PT F
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83
Query: 408 GE 413
G+
Sbjct: 84 GK 85
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 31.5 bits (68), Expect = 0.15
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -1
Query: 656 TSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLGAG 483
TSL ++ +SS + S +S + S S +PT+++SS + +S S+ V SS +G
Sbjct: 81 TSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSG 138
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 656 TSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLGAGSN 477
T+ A + TSS S NS S S + +TTS+ +S S+T S+ S+
Sbjct: 167 TTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSS 226
Query: 476 LGTHVLDN 453
L + L++
Sbjct: 227 LASSSLNS 234
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -1
Query: 635 AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLGAGSNLGTHVLD 456
A TSS S NS S S + +TTS+ +S S+TV SS S+ T
Sbjct: 206 ATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAAT 265
Query: 455 NA 450
+A
Sbjct: 266 SA 267
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 665 FSRTSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPT 552
F+R SL + K ++ +L + N+P +SF K+PT
Sbjct: 366 FTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPT 403
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +3
Query: 216 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 395
L+ FYAPW CK++ + A D K++ E E F V+ P
Sbjct: 24 LLNFYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFV 78
Query: 396 IFRKGELSSEYNG 434
+ ++ + +G
Sbjct: 79 LIHGAKVLARISG 91
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 160 FSILQIPTFRLFYLNMIQPWSCF 228
F LQ+ FR + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +1
Query: 463 TCVPKLDPAPRELLTVADFEAFTSKDEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHS 642
+CV EL + D E TSKDE V EK + K + +++++ + + S
Sbjct: 63 SCVEYFRQRKEELESHVDSEIETSKDESSVNKVEEKVEEFKED--NVEQEIKQKRSLSES 120
Query: 643 SANEVLEK 666
+LEK
Sbjct: 121 PQESMLEK 128
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -1
Query: 572 SFSKNPTTTTSSLEVKASKSATVRSSLGAGSNLGT 468
S S++ TT +SS AS S + SSL SN+GT
Sbjct: 264 SSSRSKTTASSSNGTFASPSFNI-SSLSGSSNIGT 297
>SPBC146.10 |mug57||meiotically upregulated gene
Mug57|Schizosaccharomyces pombe|chr 2|||Manual
Length = 189
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -3
Query: 570 LFEESDNHYFILRSKSFKISYCKELPWSWVQLGHACT*QCH*TPLVHCTRKKA 412
LF++ D H +L CK PW+ ++ + + T +VH T ++A
Sbjct: 66 LFQQKDQHITVLVPNDAAFQQCKVKPWA-IEYKNGVAVKS--TDIVHITEQQA 115
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/70 (25%), Positives = 26/70 (37%)
Frame = +1
Query: 454 LSSTCVPKLDPAPRELLTVADFEAFTSKDEVVVVGFFEKESDLKGEFLKTADKLREEVTF 633
L +T V + E TV DF++ + +G S + T D LRE
Sbjct: 591 LRNTFVKLMQETMDESTTVDDFDSLVDDKSIAAIGILNTLSTMILSLENTVDVLREIEAI 650
Query: 634 AHSSANEVLE 663
N VL+
Sbjct: 651 LLPMINFVLD 660
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.8 bits (54), Expect = 7.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -1
Query: 614 NLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLGAGSNLGT---HVLDNAIR 444
N S +F ++ +DS +PT T++ E+ AS + S AGS G+ +D++
Sbjct: 160 NWSTIFSSNASPTDS-QLSPTHTSTIAELAASTLSIFPSGSYAGSTFGSPSRSSIDSSTY 218
Query: 443 LPWS 432
LP S
Sbjct: 219 LPRS 222
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,087,462
Number of Sequences: 5004
Number of extensions: 61109
Number of successful extensions: 217
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -