Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C13
(856 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 36 0.045
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 36 0.045
At2g05510.1 68415.m00583 glycine-rich protein 35 0.079
At1g61255.1 68414.m06903 expressed protein 35 0.079
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 34 0.10
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 33 0.18
At1g27710.1 68414.m03387 glycine-rich protein 33 0.18
At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR... 33 0.18
At1g02840.2 68414.m00244 pre-mRNA splicing factor SF2 (SF2) / SR... 33 0.18
At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR... 33 0.18
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 33 0.24
At2g15780.1 68415.m01809 glycine-rich protein similar to Blue co... 33 0.32
At5g61660.1 68418.m07736 glycine-rich protein 32 0.42
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 32 0.42
At5g46730.1 68418.m05757 glycine-rich protein 32 0.56
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ... 32 0.56
At4g32490.1 68417.m04625 plastocyanin-like domain-containing pro... 32 0.56
At2g05440.2 68415.m00575 glycine-rich protein 32 0.56
At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protei... 31 0.74
At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protei... 31 0.74
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 31 0.74
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 31 0.74
At2g05530.1 68415.m00585 glycine-rich protein 31 0.74
At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP... 31 0.98
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.98
At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative stro... 31 0.98
At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to SP... 31 1.3
At1g11850.2 68414.m01364 expressed protein 31 1.3
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 30 1.7
At4g29240.1 68417.m04182 leucine-rich repeat family protein / ex... 30 1.7
At4g20300.2 68417.m02965 expressed protein 30 1.7
At4g20300.1 68417.m02964 expressed protein 30 1.7
At1g11850.1 68414.m01363 expressed protein 30 1.7
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family... 30 1.7
At1g10830.1 68414.m01244 sodium symporter-related contains five ... 30 1.7
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 29 3.0
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 3.0
At3g15400.1 68416.m01954 anther development protein, putative si... 29 3.0
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 3.0
At4g30460.1 68417.m04325 glycine-rich protein 29 3.9
At4g29030.1 68417.m04151 glycine-rich protein glycine-rich prote... 29 3.9
At3g13224.2 68416.m01658 RNA recognition motif (RRM)-containing ... 29 3.9
At2g05440.1 68415.m00574 glycine-rich protein 29 3.9
At2g02490.1 68415.m00188 hydroxyproline-rich glycoprotein family... 29 3.9
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 29 3.9
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 29 3.9
At1g74230.1 68414.m08597 glycine-rich RNA-binding protein simila... 29 3.9
At5g58040.1 68418.m07263 fip1 motif-containing protein contains ... 29 5.2
At4g10330.1 68417.m01698 glycine-rich protein 29 5.2
At3g16380.1 68416.m02074 polyadenylate-binding protein, putative... 29 5.2
At3g13570.1 68416.m01707 SC35-like splicing factor, 30a kD (SCL3... 29 5.2
At3g07810.2 68416.m00956 heterogeneous nuclear ribonucleoprotein... 29 5.2
At3g07810.1 68416.m00955 heterogeneous nuclear ribonucleoprotein... 29 5.2
At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar... 29 5.2
At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to... 29 5.2
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 29 5.2
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 29 5.2
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 29 5.2
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t... 28 6.9
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 28 6.9
At4g39260.4 68417.m05560 glycine-rich RNA-binding protein 8 (GRP... 28 6.9
At4g35785.2 68417.m05083 transformer serine/arginine-rich ribonu... 28 6.9
At4g21620.1 68417.m03134 glycine-rich protein 28 6.9
At1g66820.1 68414.m07595 glycine-rich protein 28 6.9
At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing ... 28 6.9
At1g33240.1 68414.m04108 trihelix DNA-binding protein, putative ... 28 6.9
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 28 6.9
At1g04800.1 68414.m00476 glycine-rich protein 28 6.9
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 9.1
At4g38680.1 68417.m05477 cold-shock DNA-binding family protein c... 28 9.1
At4g35785.1 68417.m05082 transformer serine/arginine-rich ribonu... 28 9.1
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 28 9.1
At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) / ... 28 9.1
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 28 9.1
At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-contain... 28 9.1
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F... 28 9.1
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F... 28 9.1
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 35.5 bits (78), Expect = 0.045
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +3
Query: 408 QGSRAPTLRGRQTRAISREGV-----R*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGA 572
+G R+P++ G +R+ SR R SR RSR+ + SR+ +S P +
Sbjct: 6 RGRRSPSVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSSPSRSVSSGSRSPPRRG 65
Query: 573 RAPALPSREAR---PLPRXGSSAPT 638
++PA P+R R P P G+S+P+
Sbjct: 66 KSPAGPARRGRSPPPPPSKGASSPS 90
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 35.5 bits (78), Expect = 0.045
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +3
Query: 408 QGSRAPTLRGRQTRAISREGV-----R*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGA 572
+G R+P++ G +R+ SR R SR RSR+ + SR+ +S P +
Sbjct: 6 RGRRSPSVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSSPSRSVSSGSRSPPRRG 65
Query: 573 RAPALPSREAR---PLPRXGSSAPT 638
++PA P+R R P P G+S+P+
Sbjct: 66 KSPAGPARRGRSPPPPPSKGASSPS 90
>At2g05510.1 68415.m00583 glycine-rich protein
Length = 127
Score = 34.7 bits (76), Expect = 0.079
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 171 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 302
N G G+G+DG G+ GH G GG Y GG+ G GGH
Sbjct: 67 NGGGGHGLDGYGGGHGGHYGGGGGHYG-GGGGHGGGGHYGGGGH 109
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 302
G+G G G G+G G GG Y G Y G G GGH
Sbjct: 62 GHGGHNGGGGHGLDGYGGGHGGHYGGGGGHYGGGGGHGGGGH 103
>At1g61255.1 68414.m06903 expressed protein
Length = 143
Score = 34.7 bits (76), Expect = 0.079
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +3
Query: 171 NLGYGYG-IDGLDV----GYIGHGQGLGGAYNYVDGGYSSGYGL 287
N GYG G GL G+I G G GG+Y+ + GGYS G G+
Sbjct: 48 NKGYGSGGYPGLTTEPATGFILPGSGPGGSYSELSGGYSKGRGV 91
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPY 432
SP P P+ K+S PY P P P P PV + P PY
Sbjct: 574 SPSPKPAYKSSPPPYVYSSPPP-PYYSPAPKPVYKSPPPPY 613
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPY 432
SP P P+ K+ PY P P P P P+ + P PY
Sbjct: 247 SPSPKPAYKSPPPPYVYSSPPP-PYYSPSPKPIYKSPPPPY 286
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPY 432
SP P P+ K+ PY P P P P P + P PY
Sbjct: 347 SPSPKPAYKSPPPPYVYSSPPP-PYYSPSPKPTYKSPPPPY 386
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPY 432
SP P P K+ PY + P P P P P + P PY
Sbjct: 272 SPSPKPIYKSPPPPYVYNSPPP-PYYSPSPKPAYKSPPPPY 311
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPY 432
SP P P K+ PY + P P P P P + P PY
Sbjct: 599 SPAPKPVYKSPPPPYVYNSPPP-PYYSPSPKPTYKSPPPPY 638
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPY 432
SP P P+ K+ PY P P P P + P PY
Sbjct: 724 SPSPKPTYKSPPPPYVYSSPPPPPYYSPSPKVEYKSPPPPY 764
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVV 441
SP P PS K+ PY + P P P P + + P P+ V
Sbjct: 497 SPSPKPSYKSPPPPYVYNSPPP-PYYSPSPKVIYKSPPHPHVCV 539
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Frame = +3
Query: 486 PRSRAIPSRKEGALSRTRTS*QALPRQGARA-----PALPSREARPLPRXGSSAPTLPRG 650
PRS A GA SR +S A G+R P P ARPLP + P P
Sbjct: 507 PRSLASSRSARGAGSRAPSS-SAKRASGSRGRRPRPPLPPPARARPLPPPARARPMPPPA 565
Query: 651 ETRAIPRSXLRCPYRXPTPL 710
R +P R P PL
Sbjct: 566 RARPLPPPARSYDRRPPVPL 585
>At1g27710.1 68414.m03387 glycine-rich protein
Length = 212
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +3
Query: 159 RGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
+G L G GYG G G G+G G GG + GG+ G G GG
Sbjct: 99 KGELTAG-GYGGGGPGYGGGGYGPGGGGGGVVIGGGFGGGAGYGSGG 144
>At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 402 SRQGSRAPTLRGRQ-TRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARA 578
SR+ SR+P+ RGR +++ SR R SR RSR SR + ++S ++ + +R+
Sbjct: 197 SRKDSRSPS-RGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSSRRSPAKSTSRS 252
Query: 579 PALPSREARPLPRXGSSAPTLP 644
P S+ P PR S P
Sbjct: 253 PGPRSKSRSPSPRRSRSRSRSP 274
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +3
Query: 480 SRPRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRXGSSAPTLPRGETR 659
SR SR K + SR R+ ++ R +R+ + ++ +R P +S PR ++R
Sbjct: 201 SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSR 260
Query: 660 AIPRSXLRCPYRXPTPL*SXSVSRQGAR 743
+ R R P P SV ++G++
Sbjct: 261 SPSPRRSRSRSRSPLP----SVQKEGSK 284
>At1g02840.2 68414.m00244 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 285
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 402 SRQGSRAPTLRGRQ-TRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARA 578
SR+ SR+P+ RGR +++ SR R SR RSR SR + ++S ++ + +R+
Sbjct: 197 SRKDSRSPS-RGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSSRRSPAKSTSRS 252
Query: 579 PALPSREARPLPRXGSSAPTL 641
P S+ P PR + TL
Sbjct: 253 PGPRSKSRSPSPRRWITVETL 273
>At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 402 SRQGSRAPTLRGRQ-TRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARA 578
SR+ SR+P+ RGR +++ SR R SR RSR SR + ++S ++ + +R+
Sbjct: 197 SRKDSRSPS-RGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSSRRSPAKSTSRS 252
Query: 579 PALPSREARPLPRXGSSAPTLP 644
P S+ P PR S P
Sbjct: 253 PGPRSKSRSPSPRRSRSRSRSP 274
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +3
Query: 480 SRPRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRXGSSAPTLPRGETR 659
SR SR K + SR R+ ++ R +R+ + ++ +R P +S PR ++R
Sbjct: 201 SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSR 260
Query: 660 AIPRSXLRCPYRXPTPL*SXSVSRQGAR 743
+ R R P P SV ++G++
Sbjct: 261 SPSPRRSRSRSRSPLP----SVQKEGSK 284
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 304 PTSPRPSPSSKASLXPYAVDRPVPYPV--EKHVPYPVKVAVPQPYEVVKHVPYHVKEYVK 477
P + +P P K P V +P P V + +P V V +P ++H P ++ VK
Sbjct: 314 PPTKKPCPPKKVDPPPVPVHKPPPKIVIPPPKIEHPPPVPVYKPPPKIEHPPIYIPPIVK 373
Query: 478 VP 483
P
Sbjct: 374 KP 375
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +1
Query: 298 DIPTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVK 477
D P P P V+ P P P + P P K+ P P V K P +++
Sbjct: 215 DPPPKKEVPPPVPVYKPPPKVELPPPIPKKPCPPKPPKIEHPPPVPVYKPPP-KIEKPPP 273
Query: 478 VPVH 489
VPV+
Sbjct: 274 VPVY 277
>At2g15780.1 68415.m01809 glycine-rich protein similar to Blue
copper protein precursor (SP:Q41001) {Pisum sativum};
contains a Pfam PF02298: Plastocyanin-like domain
related to blue copper-binding protein; contains a
domain related to blue copper-binding protein
Length = 257
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 177 GYGYGIDGL-----DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHT 305
G+G+G G+ G G G G+G NY G SG G +GGH+
Sbjct: 84 GWGWGWGGVPNNTHSSGSGGSGWGMGPNNNYSSGSGGSGSGWGYGGHS 131
>At5g61660.1 68418.m07736 glycine-rich protein
Length = 134
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +3
Query: 177 GYGYGI-DGLDVGYIGHGQGLGGA----YNYVDGGYSSGYGLNFGG 299
GYGYG G GY G+G G GGA Y Y G SG G GG
Sbjct: 74 GYGYGSGSGSGTGY-GYGSGGGGARGGGYGYGSGNGRSGGGGGGGG 118
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +1
Query: 304 PTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVP 453
PT P+P P P P P PV P P K P P V H P
Sbjct: 70 PTPPKPQPKPAPPPEPKPAPPPAPKPVP--CPSPPKPPAPTPKPVPPHGP 117
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVP 453
+P P+P P P P PV H P P P P K P
Sbjct: 88 APPPAPKPVPCPSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAP 135
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 177 GYGYGIDGL-DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
GYG G +G G GHG G GGA + GGY+SG G GG
Sbjct: 72 GYG-GAEGYASGGGSGHGGGGGGAAS--SGGYASGAGEGGGG 110
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 302
GYG G G G G G+G GG+Y GG S G GGH
Sbjct: 242 GYGGGAAGGYGGGGGGGEGGGGSYGGEHGGGSGGGHGGGGGH 283
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 162 GLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
G+ + GYG G G G G G+G GG Y + GY+SG G GG
Sbjct: 47 GVSSGGYG-GESGGGYGG-GSGEGAGGGYGGAE-GYASGGGSGHGG 89
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
G YG G G G G G GG Y GG + GYG GG
Sbjct: 220 GGAYGGGGAHGGGYGSGGGEGGGYG---GGAAGGYGGGGGG 257
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGG-YSSGYGLNFG 296
GYG G G G G G G GG Y GG ++SGYG G
Sbjct: 111 GYG-GAAGGHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAG 150
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 177 GYGYGIDGLDVGYI-GHGQGLGGAYNYVDGGYSSGYGLNFGG 299
G G G GY G G+G GG Y GG++ G G GG
Sbjct: 88 GGGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGG 129
>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 423
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 177 GYGYGIDGLD----VGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
GYG G+ +GY G G GG YN GGYS G G +GG
Sbjct: 279 GYGGGVGPYRGEPALGYSGRYGGGGGGYNR--GGYSMGGGGGYGG 321
Score = 31.5 bits (68), Expect = 0.74
Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 135 PXEKXLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNY---VDGGYSSGYGLNFGG 299
P ++ D R N G GYG DG G+ G G GG Y GG S GYG +GG
Sbjct: 217 PSKRFGDSRS--NFGGGYG-DGYGGGHGGGYGGPGGPYKSGGGYGGGRSGGYG-GYGG 270
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
G GYG G+ G+G G+GGA GGY G G + GG
Sbjct: 346 GGGYGSSGIG----GYGGGMGGAGG---GGYRGGGGYDMGG 379
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 302
GYG G+ G G G+ G G V GG + GYG GG+
Sbjct: 356 GYGGGMGGAGGG--GYRGGGGYDMGGVGGGGAGGYGAGGGGN 395
>At4g32490.1 68417.m04625 plastocyanin-like domain-containing
protein
Length = 221
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 304 PTSPRPSPSSKASLXPYAVDRPVPYPVEKHV--PYPVKVAVPQPYEVVKHVP 453
P P PSPS AS A+ P P PV K + P P P EV+ P
Sbjct: 138 PRHPSPSPSPSASPVRKALLSPAPIPVHKALSSPAPTPGVDPSHSEVLAPAP 189
>At2g05440.2 68415.m00575 glycine-rich protein
Length = 154
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVTKTITLVKGV 341
G YG G G G G G GG Y GGY G G + GG + + + GV
Sbjct: 100 GGHYGGGGGHYGGGGGGHGGGGHYGGGGGGYGGGGGHHGGGGHGLNEPVQTKPGV 154
>At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGL-NFGG 299
G G G G D GY G G GG+Y GGY G G N GG
Sbjct: 24 GGGGGYGGGDAGYGGRGASGGGSYG-GRGGYGGGGGRGNRGG 64
>At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGL-NFGG 299
G G G G D GY G G GG+Y GGY G G N GG
Sbjct: 24 GGGGGYGGGDAGYGGRGASGGGSYG-GRGGYGGGGGRGNRGG 64
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 31.5 bits (68), Expect = 0.74
Identities = 35/115 (30%), Positives = 49/115 (42%)
Frame = +3
Query: 351 LRRRQTRSIPS*EARALSRQGSRAPTLRGRQTRAISREGVR*GSRPRSRAIPSRKEGALS 530
LRR RS R+ R SR+P R R++SR R R SR+ P R S
Sbjct: 515 LRRSSRRSPSRSPVRSSRRSLSRSPIQLSR--RSLSRSPTRLSRRSLSRS-PIRSP-RKS 570
Query: 531 RTRTS*QALPRQGARAPALPSREARPLPRXGSSAPTLPRGETRAIPRSXLRCPYR 695
+R+ ++ + +R+P SR SS ++ R R RS R P R
Sbjct: 571 VSRSPVRSSRKSVSRSPVRSSRRRISRSPVRSSRKSVSRSPIRLSRRSISRSPIR 625
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 301 IPTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVP 453
+PT P PSP S P VP P + P P +VP P +V P
Sbjct: 169 VPTDPMPSPPPPVSPPPPTPTPSVPSPPDV-TPTPPTPSVPSPPDVTPTPP 218
>At2g05530.1 68415.m00585 glycine-rich protein
Length = 115
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 183 GYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 302
G+G +G GY G G G G + GGY+ G G N GGH
Sbjct: 44 GHGGNG---GYNGGG-GYNGGGGHNGGGYNGGGGYNGGGH 79
>At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 169
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYG 284
GYG G G GY G G+ GG Y DGG G G
Sbjct: 131 GYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYGGGG 166
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
GY G G G G+G GG GGY G G ++GG
Sbjct: 124 GYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYGG 164
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +1
Query: 304 PTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVP 483
P SP P S + PY P P PV P PV P P + P EY P
Sbjct: 572 PHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPP 631
>At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative strong
similarity to SP|O22315 Pre-mRNA splicing factor SF2
(SR1 protein) {Arabidopsis thaliana}
Length = 300
Score = 31.1 bits (67), Expect = 0.98
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 402 SRQGSRAPTLRGRQTRAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPR--QGAR 575
SR SR+P+ ++R+ SR R S RSR++ K +++ ++L R +R
Sbjct: 201 SRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSR 260
Query: 576 APALPSREARPLPRXGSSAPTLPRGETRAIPRS 674
+P+ P ++ P PR S + + R +R+ +S
Sbjct: 261 SPS-PDKKKSP-PRAMSRSKSRSRSRSRSPSKS 291
>At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to
SP|P30185 Dehydrin Rab18 {Arabidopsis thaliana}
Length = 186
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = +3
Query: 132 NPXEKXLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDV 311
NP ++ D+ G G GYG G G G G GG Y GG GYG G+
Sbjct: 18 NPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGG-QGYGSGG--QGYGTGGQGYGTG 74
Query: 312 TKT 320
T T
Sbjct: 75 TGT 77
>At1g11850.2 68414.m01364 expressed protein
Length = 108
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 162 GLLNLGYGYGID---GLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
GL LG G GI GL +G G G G GG GG+ G G GG
Sbjct: 58 GLGGLGIGAGIGAGAGLGLGGGGGGLGGGGGGLLGGGGFGGGAGGGLGG 106
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +1
Query: 349 PYAVDRPVP---YPVEKHVPYPVKVAVPQPYE--VVKHVPYHVKEYVKVPV 486
PY+ +P P YP P P+K P PYE VK+ P +K Y PV
Sbjct: 50 PYSPPKPPPIEKYPPPVQYPPPIKKYPPPPYEHPPVKYPP-PIKTYPHPPV 99
>At4g29240.1 68417.m04182 leucine-rich repeat family protein /
extensin family protein contains Pfam PF00560: Leucine
Rich Repeat domains; similar to leucine-rich
repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana]
Length = 415
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 162 GLLNLGYGYGIDG-LDVGYIGHGQGLGGAYNYVDGGYSSGYGLN 290
GL+ +G+ G + VG IG G G GG +V GGY++G N
Sbjct: 22 GLVQTDASFGVGGGVGVG-IGGGGGGGGGGVWVGGGYNNGGNRN 64
>At4g20300.2 68417.m02965 expressed protein
Length = 352
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 SGYGLNFGGHTDVTKTITLVKGVPXTLRRRQTRSIPS*EARALSRQGSRAPTLRGRQTRA 452
+G G N G T T + + GVP R R T+ + + SR+G G++ R+
Sbjct: 47 AGRGFNGGSCTTTTNNTSSLDGVPKGFRFRSTQQQQQQQDPSPSRRGGDVLLQWGQRKRS 106
Query: 453 -ISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRXGSS 629
SR +R + + A S + +++ P++ + P++P P P S
Sbjct: 107 RASRAEIRSTTTITTTADDSSSSSGQGKIQSN---KPQRRSMNPSMP--PPPPAPPIFSG 161
Query: 630 APTLPR 647
T PR
Sbjct: 162 RSTNPR 167
>At4g20300.1 68417.m02964 expressed protein
Length = 339
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 SGYGLNFGGHTDVTKTITLVKGVPXTLRRRQTRSIPS*EARALSRQGSRAPTLRGRQTRA 452
+G G N G T T + + GVP R R T+ + + SR+G G++ R+
Sbjct: 47 AGRGFNGGSCTTTTNNTSSLDGVPKGFRFRSTQQQQQQQDPSPSRRGGDVLLQWGQRKRS 106
Query: 453 -ISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRXGSS 629
SR +R + + A S + +++ P++ + P++P P P S
Sbjct: 107 RASRAEIRSTTTITTTADDSSSSSGQGKIQSN---KPQRRSMNPSMP--PPPPAPPIFSG 161
Query: 630 APTLPR 647
T PR
Sbjct: 162 RSTNPR 167
>At1g11850.1 68414.m01363 expressed protein
Length = 93
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +3
Query: 168 LNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
L LG G G+ GL IG G G G GG+ G G GG
Sbjct: 51 LGLGGGAGLGGLG---IGAGIGAGAGLGLGGGGFGGGAGGGLGG 91
>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 554
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 486 PRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLP-RXGSSAPTLPRGETRA 662
P + AIP +S + S LP RA ALP P+ R G +AP LP T A
Sbjct: 200 PGNAAIPVEPPLTMSAEKESYAPLPPPPGRA-ALPPPPPLPMAVRKGVAAPPLPPPGTAA 258
Query: 663 IP 668
+P
Sbjct: 259 LP 260
>At1g10830.1 68414.m01244 sodium symporter-related contains five
transmembrane domains; Interpro IPR001991
Sodium:dicarboxylate symporter; EST gb|F13926 comes from
this gene
Length = 367
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -2
Query: 516 LFDWVWRGNVDGNLNVLLHVIWHVFDDLVGLGHGYLDGIRHV 391
L WV+ G V G + +L+V+W D+ G G ++D + ++
Sbjct: 93 LVSWVYFGVVLGVVLFILNVVW--IDNSTGFGKSFIDAVSNI 132
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 304 PTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAV-PQPYEVVKHVP 453
P+ P PS S S P P P KH P P+ ++ P P V H P
Sbjct: 46 PSKPSPSMSPPPSPSLPLSSSPPPPPPHKHSPPPLSQSLSPPPLITVIHPP 96
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 SPRPSPSS-KASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVP 453
SP+P P + S P + P P E P P K P+P E K P
Sbjct: 522 SPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQP 570
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +3
Query: 174 LGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 296
+G GYG G VGY G G G G + +G SSG G FG
Sbjct: 207 VGRGYGSGGSGVGY-GVGIGSSGGSGFGEGIGSSG-GNGFG 245
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 313 PRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVP 453
P PSP S + P PV P E P P+ P P V P
Sbjct: 73 PEPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPP 119
>At4g30460.1 68417.m04325 glycine-rich protein
Length = 162
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTD 308
G G+G G G G G G G Y +GG GYG +GG D
Sbjct: 122 GGGHGGGGGGGGGRGGGGGSGNGEGYGEGG---GYGGGYGGGDD 162
>At4g29030.1 68417.m04151 glycine-rich protein glycine-rich protein
- Onobrychis viciifolia,PID:g2565429
Length = 115
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 177 GYGYGIDGL--DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDV 311
G G G+ G ++GY G G GG + GG SG G GG + +
Sbjct: 54 GVGGGVSGPGGNLGYGGFGGAGGGLGGGLGGGAGSGLGGGLGGGSGI 100
>At3g13224.2 68416.m01658 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 358
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +3
Query: 177 GYGYGIDGLDVG--YIGHGQG-LGGAYNYVDGGYSS---GYGLNFGG 299
GYG G G + G Y +G G LGG N GYSS YG FGG
Sbjct: 247 GYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGG 293
>At2g05440.1 68415.m00574 glycine-rich protein
Length = 127
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 183 GYGIDGLDV-GYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVTKTITLVKGV 341
GYG G G GH G GG Y GGY G G + GG + + + GV
Sbjct: 74 GYGGGGGHYGGGGGHYGGGGGHYGGGGGGYGGGGGHHGGGGHGLNEPVQTKPGV 127
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +3
Query: 171 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG---YGLNFGGH 302
N G G+G+DG G GH G GG Y G Y G YG GGH
Sbjct: 65 NGGGGHGLDGYGGGG-GHYGGGGGHYGGGGGHYGGGGGGYGGG-GGH 109
>At2g02490.1 68415.m00188 hydroxyproline-rich glycoprotein family
protein related to LENOD2 [Lupinus luteus]
gi|296830|emb|CAA39050; and genefinder
Length = 302
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 301 IPTSPR--PSPSSKASLXPYAVDRPVPYPVEK---HVPYPVKVAVPQPYEVVKHVPYHVK 465
+P SP P ++K S+ Y P+P+PV H P+ +++V Q Y + + + V
Sbjct: 112 VPPSPGHPPHQNAKISVNQYPGVFPIPHPVSPSPGHPPHQNEISVNQ-YPHILPISHPVP 170
Query: 466 EYVKVPVH 489
+K P H
Sbjct: 171 PSLKHPPH 178
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = +1
Query: 304 PTSPRPSPSSKASL----XPYAVDRPVPYPVEKHVPYPVKVAVPQP 429
P P P P S+ SL P ++ PVP P H PY P P
Sbjct: 7 PYPPLPQPPSQNSLAPPPPPPSLPPPVPPPPPSHQPYSYPPPPPPP 52
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 307 TSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVP 453
T P P SS P + P P P+ +PYP + + P P E+V P
Sbjct: 165 TVPNPPESSSNPNPPESSSNPNP-PIT--IPYPPESSSPNPPEIVPSPP 210
>At1g74230.1 68414.m08597 glycine-rich RNA-binding protein similar
to RNA-binding protein GB:S46286 from [Nicotiana
sylvestris]
Length = 289
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 171 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDG--GYSSGYGLNFGG 299
N G G G G + Y G+ G GG Y G GYG NFGG
Sbjct: 158 NAGGGGGYGG-NSSYGGNAGGYGGNPPYSGNAVGGGGGYGSNFGG 201
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +3
Query: 210 GYIGHG-QGLGGAYNYVDGGY---SSGYGLNFGGH 302
G+ G G G GG Y DGGY + GYG GG+
Sbjct: 115 GFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGY 149
>At5g58040.1 68418.m07263 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 1192
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 195 DGLDVGYIGHGQGLGGAYNYVDGGYSS-GY 281
DG D G G G G GGA GYSS GY
Sbjct: 219 DGKDGGEAGKGSGPGGATGPPKAGYSSHGY 248
>At4g10330.1 68417.m01698 glycine-rich protein
Length = 130
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 168 LNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 296
L +G G+G +G +G G G+ G + G G G+ FG
Sbjct: 35 LGVGCGFGFGAGLIGGVGFGPGVPGLQFGLGFGAGCGIGVGFG 77
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 174 LGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG 278
LG+G G G+ VG+ G+G G G AY++ Y+ G
Sbjct: 64 LGFGAGC-GIGVGF-GYGVGRGAAYDHSRSYYNVG 96
>At3g16380.1 68416.m02074 polyadenylate-binding protein, putative /
PABP, putative similar to polyadenylate-binding protein
(poly(A)-binding protein) from {Arabidopsis thaliana}
SP|P42731, [Cucumis sativus] GI:7528270, {Homo sapiens}
SP|Q13310, {Arabidopsis thaliana} SP|Q05196; contains
InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 537
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 501 IPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRXGSSA 632
+ RKE + R + QA PRQ +AP+ PS A+P+ SS+
Sbjct: 378 VAERKEDRIKRLQQYFQAQPRQYTQAPSAPS-PAQPVLSYVSSS 420
>At3g13570.1 68416.m01707 SC35-like splicing factor, 30a kD (SCL30a)
almost identical to SC35-like splicing factor SCL30a
GI:9843661 from [Arabidopsis thaliana]; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 262
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/98 (27%), Positives = 39/98 (39%)
Frame = +3
Query: 357 RRQTRSIPS*EARALSRQGSRAPTLRGRQTRAISREGVR*GSRPRSRAIPSRKEGALSRT 536
R ++R S A+ + R + R+ SR GSR RS + P R +
Sbjct: 158 RSRSRGYNSPPAKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGS-PGRVKSHSRSP 216
Query: 537 RTS*QALPRQGARAPALPSREARPLPRXGSSAPTLPRG 650
R S PR+ +R P+PR S +PRG
Sbjct: 217 RRS--VSPRKNRSYTPEQARSQSPVPRQSRSPTPVPRG 252
>At3g07810.2 68416.m00956 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 495
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +3
Query: 165 LLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG------YSSGYGLN 290
LLN GY G + VG G+G + G ++ V G YSSGYG+N
Sbjct: 211 LLN-GYAQGFNPAAVG--GYGLRMDGRFSPVGAGRSGFANYSSGYGMN 255
>At3g07810.1 68416.m00955 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 494
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +3
Query: 165 LLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG------YSSGYGLN 290
LLN GY G + VG G+G + G ++ V G YSSGYG+N
Sbjct: 211 LLN-GYAQGFNPAAVG--GYGLRMDGRFSPVGAGRSGFANYSSGYGMN 255
>At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar to
SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
{Homo sapiens}, DEAD box RNA helicase DDX3 [Homo
sapiens] GI:3523150; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 633
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 171 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG-YSSGY-GLNFGGH 302
+ G G G G G G G G GG Y GG Y GY G + GG+
Sbjct: 579 SFGSGRGGYGGGGGGYGGGGGYGGGGGYGGGGGYGGGYGGASSGGY 624
>At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to
glycine-rich protein; atGRP (GI:259447) [Arabidopsis
thaliana]
Length = 145
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +3
Query: 153 DKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
D+RG + G Y G G G+ QG GG Y G Y G G GG
Sbjct: 40 DQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGG 88
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = +1
Query: 340 SLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 489
S P V P PV K P PVK P P V K P VK Y PV+
Sbjct: 28 SSPPPPVKHYSPPPVYKSPPPPVKHYSPPP--VYKSPPPPVKHYSPPPVY 75
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = +1
Query: 322 SPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 489
SP P V P PV K P PVK P P V K P VK Y PV+
Sbjct: 38 SPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPP--VYKSPPPPVKYYSPPPVY 91
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = +1
Query: 340 SLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 489
S P V P PV K P PVK P P V K P VK Y PV+
Sbjct: 28 SSPPPPVKHYSPPPVYKSPPPPVKHYSPPP--VYKSPPPPVKHYSPPPVY 75
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = +1
Query: 322 SPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 489
SP P V P PV K P PVK P P V K P VK Y PV+
Sbjct: 38 SPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPP--VYKSPPPPVKYYSPPPVY 91
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 77 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 136
Query: 484 VH 489
V+
Sbjct: 137 VY 138
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 105 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 164
Query: 484 VH 489
V+
Sbjct: 165 VY 166
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 133 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 192
Query: 484 VH 489
V+
Sbjct: 193 VY 194
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 161 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 220
Query: 484 VH 489
V+
Sbjct: 221 VY 222
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 189 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 248
Query: 484 VH 489
V+
Sbjct: 249 VY 250
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 217 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 276
Query: 484 VH 489
V+
Sbjct: 277 VY 278
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 245 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 304
Query: 484 VH 489
V+
Sbjct: 305 VY 306
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 273 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 332
Query: 484 VH 489
V+
Sbjct: 333 VY 334
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 301 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 360
Query: 484 VH 489
V+
Sbjct: 361 VY 362
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 SPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVP 483
SP P S + V + P PV+ + P PV + P P + V K P VK Y P
Sbjct: 329 SPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPP 388
Query: 484 VH 489
V+
Sbjct: 389 VY 390
>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
RNA-binding protein from [Solanum tuberosum]
GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
sylvestris] GI:624925; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 309
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 183 GYGIDGLDVGYIGHGQGLGGAYNYVDGGY--SSGYGLNFGGH 302
G G G G G G G G Y GGY S GYG GG+
Sbjct: 122 GGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGY 163
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNY-VDGGY---SSGYGLNFGG 299
G GYG G GY G G GGA Y GGY + GYG N GG
Sbjct: 127 GGGYGGGG--GGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGG 169
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 299
GYG G G G G+G G GG GGY +GG
Sbjct: 142 GYGGGAGGYG-GSGGYGGGAGGYGGNSGGGYGGNAAGGYGG 181
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNY--VDGGYSSGYGLNFGGH 302
G GYG G GY G G GG+ Y GGY G +GG+
Sbjct: 134 GGGYGGSG---GYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGN 174
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 304 PTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVK 444
P SP+P P P P P P+ K P P+K A+ P V+
Sbjct: 85 PASPQPPPPPPIENLP-----PPPPPLPKFSPSPIKRAISLPSMAVR 126
>At4g39260.4 68417.m05560 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 105
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 219 GHGQGLGGAYNYVDGGYSSGYGLNFGG 299
G G+G GG GGY G G ++GG
Sbjct: 74 GGGRGYGGGGRREGGGYGGGDGGSYGG 100
>At4g35785.2 68417.m05083 transformer serine/arginine-rich
ribonucleoprotein, putative similar to transformer-SR
ribonucleoprotein [Nicotiana tabacum]
gi|1781299|emb|CAA70700
Length = 141
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 405 RQGSRAPTLRGRQTRAISREGVR*GSRP----RSRAIPSRKEGALSRTRTS*QALPRQGA 572
R+ SR+P+ R + R+ SR R SRP RSR++P + SR R+ ++ R
Sbjct: 8 RRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEV 67
Query: 573 RAP 581
P
Sbjct: 68 ENP 70
>At4g21620.1 68417.m03134 glycine-rich protein
Length = 131
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 141 EKXLDKRGLLNLGYGYGIDGLDVGYI-GHGQGLGGAYNYVDGGYSSGYGLNFGG 299
E K G LG+G G+ G G+I G G G G V GGY G+G GG
Sbjct: 21 ESARQKSGNDGLGFG-GVPGS--GFIPGFGNGFPGTG--VGGGYGGGFGGPSGG 69
>At1g66820.1 68414.m07595 glycine-rich protein
Length = 109
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 174 LGYGYGIDGLDVGYIGHGQGLGGAYNYVD 260
LG+G G G+ G+ G+G G+GG Y++ D
Sbjct: 76 LGFGIGC-GIGFGF-GYGFGVGGGYSFDD 102
>At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing
protein
Length = 209
Score = 28.3 bits (60), Expect = 6.9
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIG 221
GYGYG++ + +GY+G
Sbjct: 148 GYGYGLEEMSIGYLG 162
>At1g33240.1 68414.m04108 trihelix DNA-binding protein, putative
similar to GTL1 [Arabidopsis thaliana] GI:2664198
Length = 669
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +1
Query: 325 PSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVP 483
PSS + P +V P+ P P+PV + PQP + H + P
Sbjct: 152 PSSSLDVTPLSVANPILMPSSSSSPFPV-FSQPQPQTQTQPPQTHNVSFTPTP 203
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 319 PSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPY 432
P+P+ + L PY + P PY P P V P PY
Sbjct: 29 PTPTPYSPLPPYVYNSPPPYVYNSPSP-PPYVYKPPPY 65
>At1g04800.1 68414.m00476 glycine-rich protein
Length = 200
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG 278
G+G GI G G+ G G G GGA VDGG+ G
Sbjct: 81 GFGGGIGG---GFGGGGFG-GGAGKGVDGGFGKG 110
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 353 TPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPSTFPRHTQS 511
+PS P HT S PS P P+ S H S PS P H+ S
Sbjct: 220 SPSHSPAHTPSHSPAHTPSHSPAHAPSHS--PAHAPSHSPAHAPSHSPAHSPS 270
>At4g38680.1 68417.m05477 cold-shock DNA-binding family protein
contains Pfam domains PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 203
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +3
Query: 177 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 302
G GYG G GY G G G GG GG S Y GH
Sbjct: 155 GGGYGGGG---GYGGGGGGYGGGGRGGGGGGGSCYSCGESGH 193
>At4g35785.1 68417.m05082 transformer serine/arginine-rich
ribonucleoprotein, putative similar to transformer-SR
ribonucleoprotein [Nicotiana tabacum]
gi|1781299|emb|CAA70700
Length = 140
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 405 RQGSRAPTLRGRQTRAISREGVR*GSRP----RSRAIPSRKEGALSRTRT 542
R+ SR+P+ R + R+ SR R SRP RSR++P + SR R+
Sbjct: 8 RRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRS 57
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 304 PTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKH 447
PT +P PS A++ Y + P V+K + Y K Q E +H
Sbjct: 297 PTLRQPPPSFLATMEDYIKEAPQSGSVQKKLEYQEKEEEEQEEEEAEH 344
>At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 418
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +1
Query: 313 PRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVP 453
P P+ S S Y P PY H P P A P Y H P
Sbjct: 50 PFPNSSPAPSTFIYPPPTPSPYTHAPHAPSPFNHAPPDSYPFT-HAP 95
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 298 DIPTSPRPSPSS-KASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVK 465
D P+PSP K P +P H P P V P PY PY K
Sbjct: 27 DCSDPPKPSPHPVKPPKHPAKPPKPPTVKPPTHTPKPPTVKPPPPYIPCPPPPYTPK 83
>At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF00169: Pleckstring homology
(PH) domain, PF01852: Lipid-binding START domain
Length = 733
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = -2
Query: 573 EHLDGVRPV-------NWYVYGI--RHLLFDWVWRGNVDGNLNVLLHVIWH 448
EHLDG + +W +G+ R LL WR DG +L H ++H
Sbjct: 249 EHLDGHTDIIHLQLYSDWLPWGMNRRDLLLRRYWRREDDGTYVILCHSVYH 299
>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +1
Query: 313 PRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP 429
P P+P+ + P P P P VP P P P
Sbjct: 293 PAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAP 331
>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +1
Query: 313 PRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQP 429
P P+P+ + P P P P VP P P P
Sbjct: 293 PAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAP 331
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,751,685
Number of Sequences: 28952
Number of extensions: 244663
Number of successful extensions: 1383
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1989897600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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