Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C11
(851 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 350 2e-95
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 323 4e-87
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 160 3e-79
UniRef50_Q9N341 Cluster: Putative uncharacterized protein; n=2; ... 204 3e-51
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 166 5e-40
UniRef50_Q1JSZ1 Cluster: ATP-dependent RNA helicase, putative; n... 118 2e-25
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 99 1e-19
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 96 9e-19
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 96 1e-18
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 95 2e-18
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 94 3e-18
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 92 1e-17
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 92 1e-17
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 92 2e-17
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 91 2e-17
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 91 3e-17
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 91 3e-17
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 91 4e-17
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 90 6e-17
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 90 6e-17
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 90 8e-17
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 89 1e-16
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 89 1e-16
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 89 1e-16
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 89 2e-16
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 89 2e-16
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 89 2e-16
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 87 4e-16
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 87 4e-16
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 87 4e-16
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 87 5e-16
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 87 5e-16
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 87 5e-16
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 87 5e-16
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 87 7e-16
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 87 7e-16
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 87 7e-16
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 86 9e-16
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 86 9e-16
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 86 1e-15
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 86 1e-15
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 86 1e-15
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 86 1e-15
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 85 2e-15
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 85 2e-15
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 85 2e-15
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 85 2e-15
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 85 2e-15
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 85 2e-15
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 85 2e-15
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 85 2e-15
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 85 3e-15
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 85 3e-15
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 85 3e-15
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 84 4e-15
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 84 4e-15
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 84 4e-15
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 84 5e-15
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 84 5e-15
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 84 5e-15
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 84 5e-15
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 83 7e-15
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 83 7e-15
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 83 9e-15
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 83 9e-15
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 83 9e-15
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 83 9e-15
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 83 1e-14
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 83 1e-14
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 82 2e-14
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 82 2e-14
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 82 2e-14
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 82 2e-14
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 2e-14
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 82 2e-14
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 2e-14
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 82 2e-14
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 82 2e-14
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 81 3e-14
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 81 3e-14
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 81 3e-14
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 81 3e-14
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 81 3e-14
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 81 5e-14
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 81 5e-14
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 81 5e-14
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 81 5e-14
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 80 6e-14
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 80 6e-14
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 80 6e-14
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 80 8e-14
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 80 8e-14
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 80 8e-14
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 80 8e-14
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 80 8e-14
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 80 8e-14
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 79 1e-13
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 79 1e-13
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 79 1e-13
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 79 1e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 79 1e-13
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 79 1e-13
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 79 1e-13
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 79 1e-13
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 79 1e-13
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 79 1e-13
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 79 1e-13
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 79 1e-13
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 79 2e-13
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 79 2e-13
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 79 2e-13
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 79 2e-13
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 78 2e-13
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 78 2e-13
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 78 2e-13
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 78 2e-13
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 78 2e-13
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 78 2e-13
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 78 2e-13
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 78 2e-13
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 78 2e-13
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 77 3e-13
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 78 3e-13
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 78 3e-13
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 78 3e-13
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 78 3e-13
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 78 3e-13
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 77 4e-13
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 77 4e-13
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 77 4e-13
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 77 4e-13
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 77 4e-13
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 77 4e-13
UniRef50_Q54DN9 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 77 4e-13
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 77 4e-13
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 77 6e-13
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 77 6e-13
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 77 6e-13
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 77 6e-13
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 77 6e-13
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 77 6e-13
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 77 6e-13
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 77 7e-13
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 77 7e-13
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 77 7e-13
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 77 7e-13
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 77 7e-13
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 77 7e-13
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 77 7e-13
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 77 7e-13
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 77 7e-13
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 77 7e-13
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 76 1e-12
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 76 1e-12
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 76 1e-12
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 76 1e-12
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 76 1e-12
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 76 1e-12
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 76 1e-12
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 76 1e-12
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 76 1e-12
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 76 1e-12
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 76 1e-12
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 76 1e-12
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 76 1e-12
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 76 1e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 76 1e-12
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 76 1e-12
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 76 1e-12
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 76 1e-12
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 76 1e-12
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 76 1e-12
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 76 1e-12
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 76 1e-12
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 75 2e-12
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 75 2e-12
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 75 2e-12
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 75 2e-12
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 75 2e-12
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 75 2e-12
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 75 2e-12
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 75 2e-12
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 2e-12
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 75 2e-12
UniRef50_A7AN17 Cluster: DEAD/DEAH box helicase domain containin... 75 2e-12
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 75 2e-12
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 75 2e-12
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 75 3e-12
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 3e-12
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 75 3e-12
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 3e-12
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 75 3e-12
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 75 3e-12
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 75 3e-12
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 75 3e-12
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 75 3e-12
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 74 4e-12
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 74 4e-12
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 74 4e-12
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 74 4e-12
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 74 4e-12
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 74 4e-12
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 74 4e-12
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 74 5e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 74 5e-12
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 74 5e-12
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 74 5e-12
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 74 5e-12
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 74 5e-12
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 73 7e-12
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 7e-12
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 73 7e-12
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 73 7e-12
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 73 7e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 73 7e-12
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 73 7e-12
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 73 7e-12
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 73 7e-12
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 73 7e-12
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 73 7e-12
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 73 7e-12
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 73 7e-12
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 73 9e-12
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 73 9e-12
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 73 9e-12
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 73 9e-12
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 73 9e-12
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 73 9e-12
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 73 9e-12
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 73 9e-12
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 73 9e-12
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 9e-12
UniRef50_Q1E7Y4 Cluster: ATP-dependent RNA helicase MAK5; n=11; ... 73 9e-12
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 73 9e-12
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 73 1e-11
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 73 1e-11
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 73 1e-11
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 73 1e-11
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 73 1e-11
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 73 1e-11
UniRef50_Q4PGW1 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 73 1e-11
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 73 1e-11
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 73 1e-11
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 73 1e-11
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 72 2e-11
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 72 2e-11
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 72 2e-11
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 72 2e-11
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 72 2e-11
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 72 2e-11
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 72 2e-11
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 72 2e-11
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 72 2e-11
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 72 2e-11
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 72 2e-11
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 72 2e-11
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 72 2e-11
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 72 2e-11
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 72 2e-11
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 72 2e-11
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 72 2e-11
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 72 2e-11
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 72 2e-11
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 72 2e-11
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 72 2e-11
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 72 2e-11
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 71 3e-11
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 71 3e-11
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 71 3e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 71 3e-11
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 71 3e-11
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 3e-11
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 71 3e-11
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 71 4e-11
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 71 4e-11
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 71 4e-11
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 71 4e-11
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 71 4e-11
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 71 5e-11
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 5e-11
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 71 5e-11
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 71 5e-11
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 71 5e-11
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 71 5e-11
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 71 5e-11
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 71 5e-11
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 71 5e-11
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 71 5e-11
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 71 5e-11
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 71 5e-11
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 71 5e-11
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 5e-11
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 5e-11
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 71 5e-11
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 71 5e-11
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 71 5e-11
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 71 5e-11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 70 6e-11
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 70 6e-11
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 70 6e-11
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 70 6e-11
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 70 6e-11
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 70 6e-11
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 70 6e-11
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 70 9e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 70 9e-11
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 70 9e-11
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 70 9e-11
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 9e-11
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 70 9e-11
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 70 9e-11
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 70 9e-11
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 70 9e-11
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 70 9e-11
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 70 9e-11
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 69 1e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 69 1e-10
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 69 1e-10
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 69 1e-10
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 1e-10
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 69 1e-10
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 69 2e-10
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 69 2e-10
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 69 2e-10
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 69 2e-10
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 69 2e-10
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 69 2e-10
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 69 2e-10
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 69 2e-10
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 2e-10
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 69 2e-10
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 69 2e-10
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 69 2e-10
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 68 3e-10
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 68 3e-10
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 68 3e-10
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 68 3e-10
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 68 3e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 68 3e-10
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 68 3e-10
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 68 3e-10
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 68 3e-10
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 68 3e-10
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 3e-10
UniRef50_Q11V40 Cluster: Possible ATP-dependent RNA helicase; n=... 68 3e-10
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 68 3e-10
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 68 3e-10
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 3e-10
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 68 3e-10
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 67 5e-10
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 67 5e-10
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 67 5e-10
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 67 5e-10
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 67 5e-10
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 67 5e-10
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 67 5e-10
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 67 5e-10
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 67 5e-10
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 67 5e-10
UniRef50_UPI0000DB72AE Cluster: PREDICTED: similar to CG9143-PA;... 67 6e-10
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 67 6e-10
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 67 6e-10
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 67 6e-10
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 67 6e-10
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 67 6e-10
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 67 6e-10
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 67 6e-10
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 67 6e-10
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 67 6e-10
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 67 6e-10
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 67 6e-10
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 66 8e-10
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 66 8e-10
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 66 8e-10
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 66 8e-10
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 66 8e-10
UniRef50_Q6CQA1 Cluster: ATP-dependent RNA helicase MSS116, mito... 66 8e-10
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 66 1e-09
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 66 1e-09
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 66 1e-09
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 66 1e-09
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 66 1e-09
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 66 1e-09
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 66 1e-09
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 66 1e-09
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 66 1e-09
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 66 1e-09
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 66 1e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 66 1e-09
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 66 1e-09
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 66 1e-09
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 66 1e-09
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 66 1e-09
UniRef50_A7U5W9 Cluster: DEAD-box helicase 7; n=5; Plasmodium|Re... 66 1e-09
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 66 1e-09
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 66 1e-09
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 66 1e-09
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 65 2e-09
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 65 2e-09
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 65 2e-09
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 65 2e-09
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 65 2e-09
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 65 2e-09
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 65 2e-09
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 2e-09
UniRef50_Q61FS8 Cluster: Putative uncharacterized protein CBG115... 65 2e-09
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 65 2e-09
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 65 2e-09
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 65 2e-09
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 64 3e-09
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 64 3e-09
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 64 3e-09
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 64 3e-09
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 64 3e-09
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 64 3e-09
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 3e-09
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_A7NW17 Cluster: Chromosome chr5 scaffold_2, whole genom... 64 3e-09
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 64 3e-09
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 64 3e-09
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 64 3e-09
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 64 3e-09
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 64 4e-09
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 64 4e-09
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 64 4e-09
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 4e-09
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 64 4e-09
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 64 4e-09
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 64 6e-09
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 64 6e-09
UniRef50_Q5C2I6 Cluster: SJCHGC04550 protein; n=1; Schistosoma j... 64 6e-09
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 64 6e-09
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 64 6e-09
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 64 6e-09
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 64 6e-09
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 64 6e-09
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 64 6e-09
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 64 6e-09
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 63 7e-09
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 63 7e-09
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 63 7e-09
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 63 7e-09
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 63 7e-09
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 63 7e-09
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 7e-09
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 7e-09
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 63 7e-09
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 63 1e-08
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 63 1e-08
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 63 1e-08
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 63 1e-08
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 63 1e-08
UniRef50_A2X7L1 Cluster: Putative uncharacterized protein; n=1; ... 63 1e-08
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 63 1e-08
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 63 1e-08
UniRef50_A2R3A8 Cluster: Contig An14c0130, complete genome; n=1;... 63 1e-08
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 1e-08
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 63 1e-08
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 62 1e-08
>UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX1 - Homo
sapiens (Human)
Length = 740
Score = 350 bits (861), Expect = 2e-95
Identities = 160/276 (57%), Positives = 211/276 (76%), Gaps = 2/276 (0%)
Frame = +1
Query: 10 FNFGATPFKXPPPNGYIAISQAPKENVKQNVIAAVAS-TDIKPVNNAPQAIIIEPSRELA 186
FNFG FK PP +G++A+S+AP + ++ + A T K + NAP+A+I+EPSRELA
Sbjct: 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299
Query: 187 EQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYL 366
EQT +FKKY++NPK+RELL++GG+ +DQ++ L GVD+VVGTPGRL+DL+ G L
Sbjct: 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL 359
Query: 367 SLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMA 546
+L+ RF VLDEADGLL GY + I R+H QIP++TSDG+RLQ++VCSATLH+F VKK++
Sbjct: 360 NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419
Query: 547 EKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTLRK-HVQTDGVHAKDNIRSGN 723
EK+MHFPTWVDLKGED+VP+T +P+ D W+ L K H++TD VHAKDN R G
Sbjct: 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479
Query: 724 TTPETLSEAVXILKGKYCVRAIREHKMDRAIIFCRT 831
+PE SEA+ ILKG+Y VRAI+EHKMD+AIIFCRT
Sbjct: 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515
>UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000010668 - Anopheles gambiae
str. PEST
Length = 417
Score = 323 bits (793), Expect = 4e-87
Identities = 157/234 (67%), Positives = 185/234 (79%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
KP NAPQAI+IEPSRELAEQT Q KFKK+L++P++RELL++GG+NV++QI L GV
Sbjct: 110 KPKPNAPQAIVIEPSRELAEQTFNQIRKFKKHLKDPEVRELLLIGGVNVREQIEVLQRGV 169
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
D++V TPGRLEDLI GGY+ L CRFFVLDEADGLLK GY E+I+RLH+QIPKITSDGRR
Sbjct: 170 DIIVATPGRLEDLIGGGYVLLNSCRFFVLDEADGLLKQGYTEMIDRLHKQIPKITSDGRR 229
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTLR 669
LQMVVCSATLH+ LMHFPTWVDLKGEDAVPET WQ++R
Sbjct: 230 LQMVVCSATLHS---------LMHFPTWVDLKGEDAVPETVHHVV----------WQSMR 270
Query: 670 KHVQTDGVHAKDNIRSGNTTPETLSEAVXILKGKYCVRAIREHKMDRAIIFCRT 831
H+QTDGVHA+DN+R G+ T ETLSEAV +LKG+Y ++AI EH MDRAIIFCRT
Sbjct: 271 THIQTDGVHARDNVRPGSNTAETLSEAVKMLKGEYTLKAIDEHNMDRAIIFCRT 324
>UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 867
Score = 160 bits (389), Expect(2) = 3e-79
Identities = 71/112 (63%), Positives = 88/112 (78%)
Frame = +1
Query: 496 MVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTLRKH 675
+V CSATLH+F VKK+AE++MHFPTWVDLKG+D+VPET DP D+SW L+K
Sbjct: 445 IVTCSATLHSFDVKKLAERIMHFPTWVDLKGQDSVPETVHHVVCHVDPLVDTSWVNLKKK 504
Query: 676 VQTDGVHAKDNIRSGNTTPETLSEAVXILKGKYCVRAIREHKMDRAIIFCRT 831
V+TDG+HAKDNI+ + +PE+LSEAV ILK +Y V+AI EHKMD IIFCRT
Sbjct: 505 VKTDGIHAKDNIKPNSQSPESLSEAVKILKAEYLVKAIDEHKMDSGIIFCRT 556
Score = 158 bits (384), Expect(2) = 3e-79
Identities = 84/164 (51%), Positives = 109/164 (66%), Gaps = 2/164 (1%)
Frame = +1
Query: 10 FNFGATPFKXPPPNGYIAISQAPKE-NVKQNVIAAVASTDIKPVNN-APQAIIIEPSREL 183
FNFG + F+ PP YI +S+APK+ A++ S K N AP AIIIEPSREL
Sbjct: 253 FNFGDSSFQCPPKGDYIPLSKAPKDVTAAGGDTASIQSKPGKFSNRCAPSAIIIEPSREL 312
Query: 184 AEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGY 363
A QT Q F+ +L PK++ +L+VGG N KDQI QLN GVD+V GTPG+L D I
Sbjct: 313 AHQTHAQIHLFQNHLPQPKVKPVLLVGGENAKDQIRQLNDGVDIVTGTPGKLNDFITTDK 372
Query: 364 LSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQ 495
+SL +FF+LDEADGLL G +LI +++ +IPKIT+ G+RLQ
Sbjct: 373 ISLHQVKFFILDEADGLLAQGNNDLIMKIYNKIPKITA-GKRLQ 415
>UniRef50_Q9N341 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 728
Score = 204 bits (497), Expect = 3e-51
Identities = 112/279 (40%), Positives = 154/279 (55%), Gaps = 6/279 (2%)
Frame = +1
Query: 13 NFGATP-FKXPPPNGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAE 189
NFG + FK PP Y+A++QA N+K A S D ++ P +I+EP+REL +
Sbjct: 240 NFGGSAAFKYPPGTQYVAVAQAEDGNLKWWSAAEQLSID----SSTPLCVILEPTRELVQ 295
Query: 190 QTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLS 369
QT F L++PKIR + + G N+ + L G D+VVGTP R+ DLI G L+
Sbjct: 296 QTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLA 355
Query: 370 LTHCRFFVLDEADGLL--KAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKM 543
+ +F V+DE D L K IE + R +P + DG R Q++ CSATLH F+V +
Sbjct: 356 TKNLQFVVIDEIDQFLAGKNNCAHQIESIFRVLPLVAQDGTRRQVIACSATLHNFEVCRF 415
Query: 544 AEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSW---QTLRKHVQTDGVHAKDNIR 714
A++ M FP W+DLKG D V D +D W + H++ D VH D IR
Sbjct: 416 ADRHMSFPQWIDLKGADCVSADVHHVVCHVDASEDKQWIRQMHQQVHLEDDHVHDGDQIR 475
Query: 715 SGNTTPETLSEAVXILKGKYCVRAIREHKMDRAIIFCRT 831
G T +T+S ILKG Y VRAI +MD+AI+FCRT
Sbjct: 476 PGTTDKDTISLGTKILKGIYVVRAIHALQMDKAIVFCRT 514
>UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 765
Score = 166 bits (404), Expect = 5e-40
Identities = 92/230 (40%), Positives = 139/230 (60%), Gaps = 4/230 (1%)
Frame = +1
Query: 154 AIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPG 333
++IIEP+RELA+Q + F KYL++PKI+ L +GG N++ D+++GTPG
Sbjct: 321 SLIIEPTRELADQAYSAILNFSKYLDSPKIQVSLCIGGEKSNGGRNKIEG--DIIIGTPG 378
Query: 334 RLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSA 513
RLE L++ G + L+ +FFVLDEAD L+ ++ ++ ++P G+ LQ++ SA
Sbjct: 379 RLESLVKEGSIDLSSIKFFVLDEADQLIDDNLA-IVNFIYNKLPI----GQNLQVLFFSA 433
Query: 514 TLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQK-DSSWQTLRK--HVQT 684
TLH+ +V K E++ PTWVDLKG D +P+ DP K +S W+ ++T
Sbjct: 434 TLHSTKVIKFCEQITKNPTWVDLKGRDFIPDLITHAYVKADPIKFESLWRNSENPLRIRT 493
Query: 685 DGVHAKDNIRSGN-TTPETLSEAVXILKGKYCVRAIREHKMDRAIIFCRT 831
DGVHA D + G PE SEA+ +LK + ++ I+ KMD+AIIF RT
Sbjct: 494 DGVHASDVQQFGKLKEPEQKSEAIKLLKAQLLLKCIQSFKMDQAIIFART 543
>UniRef50_Q1JSZ1 Cluster: ATP-dependent RNA helicase, putative; n=1;
Toxoplasma gondii|Rep: ATP-dependent RNA helicase,
putative - Toxoplasma gondii
Length = 712
Score = 118 bits (283), Expect = 2e-25
Identities = 76/230 (33%), Positives = 117/230 (50%), Gaps = 3/230 (1%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
Q +I+EP+R+LA QT K +YLE P IR L GG + ++Q ++ G +VVGT
Sbjct: 279 QCLILEPTRDLALQTFNCLKKIGRYLEAPSIRVALCCGG-DEREQRGEMAKGPHIVVGTL 337
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
++ I G LS+ + +LDEAD L+K + L E L + RR+Q+ + S
Sbjct: 338 QKVSSCIHRGVLSVKSLKLLILDEADELVK--FDALSEILKIKRAASVGSSRRMQVSLFS 395
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTL---RKHVQ 681
ATLH V++ E L PTWVDLKG+ +P+T + +++ R +
Sbjct: 396 ATLHTDDVRRAVEALTERPTWVDLKGKVTIPDTVHALICPVFAHEGMPFKSASLGRVEPK 455
Query: 682 TDGVHAKDNIRSGNTTPETLSEAVXILKGKYCVRAIREHKMDRAIIFCRT 831
TDG+HA + + + S+ V +K V KM+ ++FCRT
Sbjct: 456 TDGIHA-PSAALPRHSEQFASQRVKEIKPHLVVALADAFKMETCLVFCRT 504
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 99.1 bits (236), Expect = 1e-19
Identities = 60/148 (40%), Positives = 87/148 (58%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+AI+I P+RELA+Q +F+K P++ + V GG Q N L GVDVVVGT
Sbjct: 77 PRAIVIAPTRELAKQVAEEFSK-----SGPQLSTVTVYGGAAYGPQENALRRGVDVVVGT 131
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D ++ G L L+ ++ VLDEAD +L G+ + IE + +Q P Q ++
Sbjct: 132 PGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAAR------QTMLF 185
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGE 591
SATL+ ++ ++A K + P VDL GE
Sbjct: 186 SATLND-EIHRLARKYLREPVVVDLVGE 212
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 96.3 bits (229), Expect = 9e-19
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQAI++ P+RELA Q + + ++ K+ E + GG ++ DQ+ L G +VVGT
Sbjct: 95 PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLE--IYGGASILDQMRALKSGAHIVVGT 152
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR++DLI L L C F+LDEAD +LK G+ + + + Q P+ Q V+
Sbjct: 153 PGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPE------SAQRVLF 206
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGED-AVPETXXXXXXXXDPQKDSSWQTLRKHVQT 684
SAT+ VK++ E+ + P VD+ G + V + +KD + L + +T
Sbjct: 207 SATMPP-MVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEET 265
Query: 685 D 687
D
Sbjct: 266 D 266
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 95.9 bits (228), Expect = 1e-18
Identities = 62/182 (34%), Positives = 97/182 (53%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G AI+ A K A ++ P + QA+I+ P+RELA Q QF KY
Sbjct: 43 GRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQR 102
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
N I L GG Q+ QL G VVVGTPGR+ D I G L L + + F+LDEAD
Sbjct: 103 NVTIAVLC--GGQEYGRQLKQLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADE 160
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
+L+ G+ E +E + ++P+ + QM + SAT+ ++++++A ++ P ++++ E
Sbjct: 161 MLRMGFIEDVETILEKLPE------KKQMALFSATM-PYRIRQIANTYLNDPASIEIRME 213
Query: 592 DA 597
A
Sbjct: 214 TA 215
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 95.1 bits (226), Expect = 2e-18
Identities = 54/138 (39%), Positives = 84/138 (60%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +II P+RELA Q + KF N ++ ++V GG V Q + L G +++VGT
Sbjct: 487 PEVVIISPTRELAIQIHREARKFS---HNSVLKSVIVYGGTQVSHQKSSLMNGCNILVGT 543
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL+D + G++ ++ +FF+LDEAD +L G+G IE + Q P +T GRR+ ++
Sbjct: 544 PGRLKDFVDKGFIDFSNVQFFILDEADRMLDMGFGSDIEFI-AQHPTMTPVGRRVTLMF- 601
Query: 508 SATLHAFQVKKMAEKLMH 561
SAT V+K+A K +H
Sbjct: 602 SATF-PDDVQKIAGKYLH 618
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 94.3 bits (224), Expect = 3e-18
Identities = 61/153 (39%), Positives = 92/153 (60%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+AIII P+RELA QT ++ K I+ +V GG ++ Q+ +L G D+V+GTP
Sbjct: 67 KAIIILPTRELALQTHRVASRLGKI---SGIKSTIVYGGASIIRQVEELP-GSDIVIGTP 122
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR+ DL YL L H ++ VLDEAD +L G+ + I ++I T +GR Q ++ S
Sbjct: 123 GRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDI----KKIISFTPEGR--QTILLS 176
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
ATL A +VK +A M+ P +VD G++A+P +
Sbjct: 177 ATLPA-EVKTIANHFMNNPEFVDAGGDEAIPSS 208
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 92.3 bits (219), Expect = 1e-17
Identities = 57/169 (33%), Positives = 96/169 (56%)
Frame = +1
Query: 103 IAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKD 282
+ A A+T + P + +A+I+ P+RELA Q K+ KYL +R +V GGIN++
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLA---LRTAVVFGGINIEP 123
Query: 283 QINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
QI L GV+++V TPGRL DL++ ++ + VLDEAD +L G+ I+R +
Sbjct: 124 QIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKR----V 179
Query: 463 PKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
+ S R Q ++ SAT +++K+A+ L+ P ++ ++ V E+
Sbjct: 180 MALLSPQR--QSLMFSATFSG-EIRKLADSLLKQPVRIEAAVQNTVNES 225
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 92.3 bits (219), Expect = 1e-17
Identities = 57/155 (36%), Positives = 89/155 (57%)
Frame = +1
Query: 103 IAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKD 282
I AV TD+K +N PQ I+I P+RELAEQ + K Y N KI L + GG+ ++
Sbjct: 59 IPAVMGTDVK--SNKPQTIVITPTRELAEQVAMELRKIAAYKANLKI--LTLYGGVPLRA 114
Query: 283 QINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
Q + L G +++GTPGR++D + G L+L + VLDEAD +L G+ E I ++ +
Sbjct: 115 QADSLAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNM 174
Query: 463 PKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFP 567
PK + Q ++ SAT +++ +A+ L+ P
Sbjct: 175 PK------QKQTLLFSATFPP-KIESLAKALLKDP 202
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 91.9 bits (218), Expect = 2e-17
Identities = 55/154 (35%), Positives = 89/154 (57%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+++I+EP+RELA Q F K+ +YL K+ L++GG ++ DQ + L+ GVDV++ T
Sbjct: 295 PRSLILEPTRELALQVAENFVKYGQYL---KLNHALLIGGESMNDQRDVLSKGVDVLIAT 351
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL G L LT R V+DEAD +L G+ +ER+ +P Q +
Sbjct: 352 PGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLP------HNRQTLFF 405
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
SAT+ A +++++A+ + P + + +V T
Sbjct: 406 SATM-APEIRRLADAFLQNPKEITVAKPASVATT 438
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 91.5 bits (217), Expect = 2e-17
Identities = 51/148 (34%), Positives = 90/148 (60%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+RELA Q +F + P + + + GG + Q+ QL+ GVDV VGT
Sbjct: 179 PLCLVLAPTRELARQVEKEFRE-----SAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGT 233
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ DL++ G L+L+ +F VLDEAD +L+ G+ E +E + ++P+ + Q ++
Sbjct: 234 PGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPE------KRQSMMF 287
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGE 591
SAT+ ++ ++ + +K ++ P VDL G+
Sbjct: 288 SATMPSW-IRSLTKKYLNNPLTVDLVGD 314
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 91.1 bits (216), Expect = 3e-17
Identities = 56/177 (31%), Positives = 96/177 (54%)
Frame = +1
Query: 64 ISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKI 243
+ QA K A ++ PQ +++ P+RELA Q F + +P +
Sbjct: 112 VGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAA--GHPHL 169
Query: 244 RELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKA 423
+ L V GG + + QI+ L GVDVVVGTPGR+ D ++ G L + VLDEAD +L+
Sbjct: 170 KVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRM 229
Query: 424 GYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
G+ + +E + Q+PK Q+V+ SAT+ ++++++++ ++ P V +K +D
Sbjct: 230 GFIDDVEWILEQLPK------ERQVVLFSATMPP-EIRRLSKRYLNDPAEVTIKTKD 279
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 91.1 bits (216), Expect = 3e-17
Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+ +I+ P+RELA Q F KYL +++ +V GG+++ Q+ L G D+VV TP
Sbjct: 79 RGLILVPTRELAAQVGEAIAGFAKYLPQ-RVKVAVVFGGVSINPQMMNLRGGADIVVATP 137
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DL++ L ++ VLDEAD LL G+GE + R+ +P R Q + S
Sbjct: 138 GRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPP------RRQNLFFS 191
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQT--LRKHVQT 684
AT ++ +AE ++H P ++++ AVPET Q D+S +T LR VQT
Sbjct: 192 ATFPP-AIEVLAESMLHDPLRIEVQ---AVPETKPDIAQRA-IQVDASRRTQLLRHLVQT 246
Query: 685 D 687
+
Sbjct: 247 E 247
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 90.6 bits (215), Expect = 4e-17
Identities = 53/145 (36%), Positives = 87/145 (60%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+++I+EP+RELA Q F K+ KY K+ L++GG+ + +Q L GVDV++ T
Sbjct: 73 PRSLILEPTRELAAQVAENFEKYGKY---HKLSMSLLIGGVPMAEQQAALEKGVDVLIAT 129
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL + G + L+ C V+DEAD +L G+ IE + ++P TS Q ++
Sbjct: 130 PGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLP--TS----RQTLLF 183
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDL 582
SAT+ +KK+A++ + P +++
Sbjct: 184 SATMPP-AIKKLADRFLSNPKQIEI 207
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 90.2 bits (214), Expect = 6e-17
Identities = 54/184 (29%), Positives = 97/184 (52%)
Frame = +1
Query: 97 NVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINV 276
N + +A+ + P + +A+I+ P+RELA+Q + K+ +R +V GG+++
Sbjct: 80 NRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTP---LRSTVVYGGVDI 136
Query: 277 KDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHR 456
QI L GV++V+ TPGRL D +Q ++L + VLDEAD +L G+ ++R+
Sbjct: 137 NPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIIN 196
Query: 457 QIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXD 636
+PK Q ++ SAT +++K+A+ M PT +++ +A E D
Sbjct: 197 LLPKTR------QNLLFSATFSP-EIQKLAKSFMVSPTLIEVARRNATSENIKQVIFALD 249
Query: 637 PQKD 648
++D
Sbjct: 250 SEED 253
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 90.2 bits (214), Expect = 6e-17
Identities = 55/148 (37%), Positives = 84/148 (56%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +++ P+RELA+Q + + YL + V GG++ Q + L GVDVVVGT
Sbjct: 181 PKFLVLAPTRELAKQVEKEIKESAPYLST-----VCVYGGVSYTIQQSALTRGVDVVVGT 235
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ DLI+G L L + VLDEAD +L G+ E +E + +P + Q ++
Sbjct: 236 PGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLP------TKRQSMLF 289
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGE 591
SAT+ + VKK+A K + P +DL G+
Sbjct: 290 SATMPTW-VKKLARKYLDNPLNIDLVGD 316
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 89.8 bits (213), Expect = 8e-17
Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVV-GGINVKDQINQLNCGVDVVVG 324
PQAI+I P+RELA+Q + + + + E+ V+ GG N+ Q+ QL G +VVG
Sbjct: 115 PQAIVIVPTRELADQVAAEAERLARGVPT----EIAVLSGGKNMNRQLRQLENGTQLVVG 170
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGR+ D +Q G L + VLDEAD +L G+ IER+ R+ P R Q ++
Sbjct: 171 TPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCP------RNRQTLL 224
Query: 505 CSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
SATL V+++AE MH P +D ++ +T
Sbjct: 225 LSATLPPV-VRRLAESYMHEPVVIDCCRDEMAVDT 258
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 89.4 bits (212), Expect = 1e-16
Identities = 55/159 (34%), Positives = 87/159 (54%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
+ P A QAI++ P+RELA Q +F + N +R L + GG ++ Q+ QL G
Sbjct: 65 LDPQQKAVQAIVLTPTRELAIQVHDAMAQF---VGNSGLRTLAIYGGQSIDRQMLQLKRG 121
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
V +VVGTPGR+ DL++ G L L ++FVLDEAD +L G+ + +E++ Q P +
Sbjct: 122 VHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAP------Q 175
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVP 603
Q + SAT+ ++ + K + P V ++ A P
Sbjct: 176 DRQTALFSATMPP-SIRMLVNKFLRSPVTVTVEQPKATP 213
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 89.4 bits (212), Expect = 1e-16
Identities = 58/183 (31%), Positives = 95/183 (51%)
Frame = +1
Query: 58 IAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENP 237
+ ++Q I ++ DI + PQA+++ P+RELA Q F ++ YL
Sbjct: 54 VGLAQTGTGKTAAFAIPMLSKIDI--TSKVPQALVLVPTRELALQVAEAFGRYGAYLS-- 109
Query: 238 KIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLL 417
++ L + GG + Q+ L G VVVGTPGR+ D ++ L L+ F VLDEAD +L
Sbjct: 110 QLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEML 169
Query: 418 KAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDA 597
G+ + +ER+ + P+ Q+ + SAT+ ++K++ K +H P V K + A
Sbjct: 170 TMGFADDVERILSETPEYK------QVALFSATMPP-AIRKLSAKYLHDPFEVTCKAKTA 222
Query: 598 VPE 606
V E
Sbjct: 223 VAE 225
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 89.0 bits (211), Expect = 1e-16
Identities = 58/184 (31%), Positives = 100/184 (54%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+++I+EP+RELA Q F + KYL ++ L++GG ++ +Q + LN GVDV++ T
Sbjct: 363 PRSLILEPTRELALQVAENFKLYGKYL---RLTHALLIGGESMAEQRDVLNRGVDVLIAT 419
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL G L LT V+DEAD +L G+ IE++ +P Q +
Sbjct: 420 PGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLP------AHRQTLFF 473
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTLRKHVQTD 687
SAT+ A +++++A+ + P + + + +V T +D +TL+K ++ +
Sbjct: 474 SATM-APEIRRLADAFLRHPVEITVSRQSSVATTIEEALVIV--PEDEKRRTLKKLLRRE 530
Query: 688 GVHA 699
V +
Sbjct: 531 NVQS 534
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 88.6 bits (210), Expect = 2e-16
Identities = 54/160 (33%), Positives = 89/160 (55%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
K N P A+I+ P+RELA+Q F +Y E+ +R + V GG ++ Q N+L G
Sbjct: 72 KKRNGTPHALILVPTRELAQQV---FDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGA 128
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
D+++ TPGRL D + G ++++ VLDEAD +L G+ ++R+ R++P
Sbjct: 129 DILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLP------ND 182
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
Q+++ SAT ++K +A KLM P V++ + ET
Sbjct: 183 KQIMLFSATFEK-RIKTIAYKLMDSPVEVEVSPANTTAET 221
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 88.6 bits (210), Expect = 2e-16
Identities = 44/106 (41%), Positives = 69/106 (65%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+A++I P+RELA+Q + F +KY + K+ L++GG++ DQ +L+ GVDV++ T
Sbjct: 74 PRALVIAPTRELADQVASSF---EKYAKGTKLSWALLIGGVSFGDQEKKLDRGVDVLIAT 130
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
PGRL D + G L +T +F V+DEAD +L G+ IER+ + P
Sbjct: 131 PGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTP 176
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 88.6 bits (210), Expect = 2e-16
Identities = 61/155 (39%), Positives = 85/155 (54%), Gaps = 2/155 (1%)
Frame = +1
Query: 145 APQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
AP+AI++ P+ ELA+Q + KF +R L GG+NV+ + QL GV V+V
Sbjct: 286 APRAIVVVPTHELAQQILFEGMKFAT---GTSVRVHLTHGGVNVRHDLMQLRSGVSVLVA 342
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGY-GELIERL-HRQIPKITSDGRRLQM 498
TPGRL I+ G +SL+ C F VLDEAD LL G+ GE+ E L H +P Q+
Sbjct: 343 TPGRLLHFIRSGLISLSMCNFIVLDEADRLLDEGFEGEMREFLEHEDLP----PRETRQV 398
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVP 603
V+ SAT +V+ + L+ P V + G VP
Sbjct: 399 VMLSATFED-EVRDLGMSLLADPITVTV-GVVGVP 431
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 87.4 bits (207), Expect = 4e-16
Identities = 52/158 (32%), Positives = 86/158 (54%)
Frame = +1
Query: 133 PVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVD 312
P NN A+++ P+RELA Q ++ + KIR + + GG + Q+ L+ G D
Sbjct: 69 PGNNLTHALVLVPTRELAVQVSQSVDRYSENCPR-KIRSVAIYGGAAINPQMQSLSKGCD 127
Query: 313 VVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRL 492
+VV TPGRL DL++ L L + VLDEAD +L G+ + ++ + Q P +
Sbjct: 128 IVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTP------GNV 181
Query: 493 QMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
Q ++ SAT +VK++ E+L+ P + +K E +P+
Sbjct: 182 QTLLFSATF-PDKVKELTEELLRNPVEISVKQEATLPD 218
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 87.4 bits (207), Expect = 4e-16
Identities = 50/147 (34%), Positives = 83/147 (56%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+++ P+RELA Q FT Y N +R L++ GG+ Q +L G+D++V TP
Sbjct: 77 RALVLAPTRELATQIAESFTA---YGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATP 133
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DLI G++ L+H FVLDE D +L G ++R+ +P R Q ++ S
Sbjct: 134 GRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLP------RERQNMLFS 187
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGE 591
AT+ +++K+A+ ++ P + + E
Sbjct: 188 ATM-PVEIEKLADTILKGPVKIAMTPE 213
>UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=3;
Paramecium tetraurelia|Rep: Nucleolar RNA helicase II,
putative - Paramecium tetraurelia
Length = 664
Score = 87.4 bits (207), Expect = 4e-16
Identities = 52/144 (36%), Positives = 87/144 (60%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
N P +++ P+RELA Q T+F + EN + R + GG ++++QI+Q+ G ++V
Sbjct: 95 NKNPYVLVLLPTRELAIQVTTEFNTIL-HKEN-EYRIYSIYGGTDLRNQIDQVRQGCEIV 152
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
VGTPGR++DL++ L L + VLDEAD +L G+ E IE++ + R++QM
Sbjct: 153 VGTPGRIQDLLERKVLKLDEIQVVVLDEADQMLNFGFQENIEKIMSYF-----NERKIQM 207
Query: 499 VVCSATLHAFQVKKMAEKLMHFPT 570
++ SAT+ + VK+++ K M T
Sbjct: 208 LLFSATIPDW-VKELSHKYMEANT 230
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 87.0 bits (206), Expect = 5e-16
Identities = 57/169 (33%), Positives = 92/169 (54%)
Frame = +1
Query: 103 IAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKD 282
I A+ DI N Q++I+ P+RELA Q CT+ K K+ + +R L V GG +++
Sbjct: 57 IPAIEHVDISI--NQTQSLILCPTRELALQVCTELKKLSKFKKG--LRVLAVYGGESIER 112
Query: 283 QINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
QI L G +VVGTPGR+ D + L+ +H +LDEAD +L G+ E IE + ++
Sbjct: 113 QIRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRL 172
Query: 463 PKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
P+ Q V+ SATL A + +A++ + P + ++ ++ T
Sbjct: 173 PE------ERQTVLFSATL-APPILALAKRFQNNPEIIKIERKELTIST 214
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 87.0 bits (206), Expect = 5e-16
Identities = 50/154 (32%), Positives = 83/154 (53%)
Frame = +1
Query: 145 APQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
APQ +++ P+RELA Q F + + N K R + GG+ Q+ L GV V +
Sbjct: 69 APQVLVLSPTRELAVQIAQSFNVYGR---NVKFRLTTIFGGVGQNPQVRALKRGVHVAIA 125
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGRL DL+ GY+ L+ + FVLDEAD +L G+ ++ + ++PK + Q +
Sbjct: 126 TPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPK------QRQTIF 179
Query: 505 CSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
+AT+ +V ++A L++ P +++ E E
Sbjct: 180 FTATMPP-KVAQLASGLLNNPVRIEVAPESTTAE 212
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 87.0 bits (206), Expect = 5e-16
Identities = 54/144 (37%), Positives = 82/144 (56%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+I+ P+RELA Q + KYL IR L+V GG+++ Q+ +L GVDV+V TP
Sbjct: 77 RALILTPTRELAAQIGENVRDYSKYLN---IRSLVVFGGVSINPQMMKLRGGVDVLVATP 133
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DL + L VLDEAD +L G+ I R+ ++P + Q ++ S
Sbjct: 134 GRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP------AKRQNLLFS 187
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDL 582
AT + +K +AEKL+H P +++
Sbjct: 188 ATF-SDDIKALAEKLLHNPLEIEV 210
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 87.0 bits (206), Expect = 5e-16
Identities = 57/179 (31%), Positives = 91/179 (50%)
Frame = +1
Query: 49 NGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYL 228
NG + A + K A I P PQ +++ P+RELA Q F KY
Sbjct: 41 NGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYA 100
Query: 229 ENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEAD 408
+ +I + + GG Q+ L G VVVGTPGR+ D I+ G L+L+ RF VLDEAD
Sbjct: 101 QGTRI--VTLYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEAD 158
Query: 409 GLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLK 585
+L+ G+ + +E + ++P+ Q + SAT+ ++++ ++ M+ P V +K
Sbjct: 159 EMLRMGFIDDVETVMAELPE------NHQTALFSATMPE-PIRRITKRFMNDPQEVKIK 210
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 86.6 bits (205), Expect = 7e-16
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G I QA K + P A QA+++ P+RELA Q + TK ++
Sbjct: 43 GKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHA- 101
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
+++ + + GG +++ QI L GVDVV+GTPGR+ D + L L+ R VLDEAD
Sbjct: 102 --RVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADE 159
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
+L G+ E IE++ + P Q ++ SAT+ +++++A + M P + + +
Sbjct: 160 MLDMGFIEDIEKILQNTP------AERQTLLFSATMPP-EIRRLAGRYMRDPITISVTPQ 212
Query: 592 D-AVPE 606
VP+
Sbjct: 213 QLTVPQ 218
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 86.6 bits (205), Expect = 7e-16
Identities = 51/156 (32%), Positives = 91/156 (58%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P A+++ P+RELA+Q + F + LE+ ++ +VVGG N++ Q ++L GV++ V
Sbjct: 190 DGPLALVLAPTRELAQQIEKEVQAFSRSLES--LKNCIVVGGTNIEKQRSELRAGVEIAV 247
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
TPGR D +Q G SL+ + VLDEAD +L G+ I + R +P+ + Q +
Sbjct: 248 ATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPE------KHQTL 301
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
+ SAT+ +++ +A++ + P V + G+ + P T
Sbjct: 302 LFSATM-PVEIEALAKEYLANPVQVKV-GKVSSPTT 335
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 86.6 bits (205), Expect = 7e-16
Identities = 42/108 (38%), Positives = 64/108 (59%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P A++I PSRELA Q + KF Y R + VVGG N + Q +L GV++V+
Sbjct: 773 DGPYALVIAPSRELAIQIYEETNKFASYCS---CRTVAVVGGRNAEAQAFELRRGVEIVI 829
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
GTPGRL+D ++ Y L C + +LDEAD ++ G+ + + + +IP
Sbjct: 830 GTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMGFEDTVHYILDKIP 877
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 86.2 bits (204), Expect = 9e-16
Identities = 53/154 (34%), Positives = 85/154 (55%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQ +++ P+RELA+Q + K+ N K+ + GG + Q L G VVGT
Sbjct: 75 PQVLVLAPTRELAQQVAMAVESYSKHESNVKVAS--IYGGSDFGSQFRALKQGPQWVVGT 132
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ D I+ G L L R VLDEAD +L+ G+ + ++ + Q+P+ + Q+ +
Sbjct: 133 PGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPE------KRQIALF 186
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
SAT+ Q+K +AEK + PT + +K + A E+
Sbjct: 187 SATMPK-QIKAVAEKHLREPTEIRIKSKTATNES 219
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 86.2 bits (204), Expect = 9e-16
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLEN---PKIRELLVVGGINVKDQINQLNCGV 309
N P +I+ PSRELA QT T F + LE P +R L +GG ++K+Q + + GV
Sbjct: 121 NEGPYGMIVVPSRELARQTFEVITHFSRALEAHGFPSLRTNLCIGGSSIKEQSDAMKRGV 180
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGE 435
+VV TPGRL DL+ ++L CR+ VLDEAD ++ G+ E
Sbjct: 181 HMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGFEE 222
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 85.8 bits (203), Expect = 1e-15
Identities = 54/168 (32%), Positives = 92/168 (54%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+A+I+ P+RELA+Q F K+Y ++ ++ + V GG +++ Q QL GVD+++ T
Sbjct: 78 PRALILAPTRELAQQV---FDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIAT 134
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D + SL + VLDEAD +L G+ I+R+ +++P+ Q ++
Sbjct: 135 PGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPE------ERQTLLF 188
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDS 651
SAT +VK +A +LM P V + ++ +T D ++ S
Sbjct: 189 SATFET-RVKALAYRLMKEPVEVQVAAANSTADTVKQMVYPVDKKRKS 235
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 85.8 bits (203), Expect = 1e-15
Identities = 61/157 (38%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQA+++ P+RELA Q + R L V GG+ + QI+ L GVDVVVGT
Sbjct: 132 PQALVMCPTRELALQVSKDISTAASVRG---ARVLTVYGGVGYESQIDALKAGVDVVVGT 188
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL Q L L+H R VLDEAD +L G+ +E L + P Q ++
Sbjct: 189 PGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTP------ASRQTMLF 242
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGED---AVPET 609
SAT+ A + +A +H P V +G D VP+T
Sbjct: 243 SATMPA-PIMALARSQLHRPVHVRAEGADTQATVPDT 278
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 85.8 bits (203), Expect = 1e-15
Identities = 53/153 (34%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Frame = +1
Query: 130 KPVNNAP--QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNC 303
K N+ P +A+++ P+RELA Q C K+ ++L ++ L V GG N+ Q +
Sbjct: 86 KQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLP---LKTLAVYGGANMNPQRKGVEQ 142
Query: 304 GVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDG 483
GVD++V TPGRL D+I +L L+ V+DEAD +L G+ IE++ R I
Sbjct: 143 GVDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLI------A 196
Query: 484 RRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDL 582
Q ++ SAT ++ VK+++ K+++ P WV++
Sbjct: 197 TEHQTMLFSAT-YSDAVKQLSHKMLNQPEWVNV 228
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 85.8 bits (203), Expect = 1e-15
Identities = 44/113 (38%), Positives = 71/113 (62%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I+ + P AII+ P+RELA+Q + KF K L IR + V+GGI+ +DQ +L G
Sbjct: 462 IEESDQGPYAIILAPTRELAQQIEEETIKFGKPLG---IRTVAVIGGISREDQGFRLRMG 518
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
++V+ TPGRL D+++ YL L+ C + VLDEAD ++ G+ ++++ +P
Sbjct: 519 CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMP 571
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 85.4 bits (202), Expect = 2e-15
Identities = 51/151 (33%), Positives = 86/151 (56%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
K + + P A+++ P+RELA Q F + ++L K+R +L+ GG+ +Q+ L G
Sbjct: 70 KSIPHHPLALVLAPTRELAIQIGDSFDAYGRHL---KLRSVLIYGGVGQGNQVKALKRGA 126
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
++V TPGRL DL+ G++ L FVLDEAD +L G+ ++R+ Q+P +
Sbjct: 127 HILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLP------TQ 180
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPTWVDL 582
Q + SATL A ++ ++A L+ P V++
Sbjct: 181 RQSLFFSATL-APKITELAHSLLSKPVTVNV 210
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 85.4 bits (202), Expect = 2e-15
Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Frame = +1
Query: 100 VIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE--NPKIRELLVVGGIN 273
++ V + K ++ P+A+I+ P+REL Q + + KYL + K+ + + GG
Sbjct: 68 LLQRVTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVVSIYGGRP 127
Query: 274 VKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLH 453
+ QI L G DVVVGTPGRL DL Q G+L L VLDEAD +L G+ IER+
Sbjct: 128 YEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERIL 187
Query: 454 RQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWV 576
RQ P D R Q ++ SAT+ + +A M+ PT +
Sbjct: 188 RQTP----DTR--QAMLFSATM-PDPIITLARTFMNQPTHI 221
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 85.4 bits (202), Expect = 2e-15
Identities = 49/137 (35%), Positives = 81/137 (59%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+RELA Q F + KK+ ++R ++ GG N +Q+ +L+ G ++V T
Sbjct: 379 PLGLVLAPTRELATQI---FEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVAT 435
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRLED+I G + L + RF VLDEAD +L G+ I R+ Q+ + G+R Q ++
Sbjct: 436 PGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQL-NMPPTGQR-QTLMF 493
Query: 508 SATLHAFQVKKMAEKLM 558
SAT Q++++A +
Sbjct: 494 SATFPK-QIQELASDFL 509
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 85.0 bits (201), Expect = 2e-15
Identities = 52/135 (38%), Positives = 75/135 (55%)
Frame = +1
Query: 64 ISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKI 243
I QA K A +++ N Q ++I P+RELA Q Q KY + KI
Sbjct: 42 IGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCS-KI 100
Query: 244 RELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKA 423
L++GG++ + Q LN GV++VV TPGRLEDL+ + L+H + F LDEAD LLK
Sbjct: 101 A--LILGGVSYEKQKAALNSGVNIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKI 158
Query: 424 GYGELIERLHRQIPK 468
G+ I ++ ++PK
Sbjct: 159 GFYNEIIKIMNKLPK 173
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 85.0 bits (201), Expect = 2e-15
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Frame = +1
Query: 58 IAISQAPKENVKQNVIAAVASTDIKPV--NNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
+ I+Q V+ + KP+ N A+++ P+RELA Q F F L
Sbjct: 50 LGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALP 109
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
N KI+ L V GG+++ Q+ QL GV++++ TPGRL DL+ + L+ VLDEAD
Sbjct: 110 N-KIKSLAVYGGVSINPQMIQLQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADK 167
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
+L G+ E + + + +P ++ Q ++ SATL V + E L+H P +++ E
Sbjct: 168 MLNLGFKEEMANIFKLLP------QKRQNLLFSATL-GKDVDTITEFLLHDPVKIEIIAE 220
Query: 592 D 594
+
Sbjct: 221 E 221
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 85.0 bits (201), Expect = 2e-15
Identities = 59/161 (36%), Positives = 84/161 (52%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I+P PQA+I+ P+RELA Q + K + + I + + GG + DQ L G
Sbjct: 65 IEPGLKKPQALILCPTRELAIQVNEEI---KSFCKGRGITTVTLYGGAPIMDQKRALKKG 121
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
VD+VV TPGR I+ G L L + VLDEAD +L G+ E +E+ + K + D R
Sbjct: 122 VDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEK----VLKASPDDR 177
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
+ M SAT+ ++KK+AE MH + K E ET
Sbjct: 178 TVLMF--SATMPP-RLKKIAESYMHNSITIKAKSETMTMET 215
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 85.0 bits (201), Expect = 2e-15
Identities = 54/159 (33%), Positives = 88/159 (55%)
Frame = +1
Query: 133 PVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVD 312
P PQ +I+ P+RELA Q K KYL++ K + IN++ QI LN GV
Sbjct: 67 PEEAGPQGLILTPARELAVQVDNDIRKMAKYLKH-KTTAIYGQHNINLETQI--LNKGVS 123
Query: 313 VVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRL 492
+V GTPGR+ D I G LS + RF VLDEAD +L G+ + + R+ + +PK R+
Sbjct: 124 IVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPK-----ERI 178
Query: 493 QMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
++ SAT+ ++ + ++ M+ P ++++ + +T
Sbjct: 179 TLLF-SATMPP-EIHNICKRYMNNPVTIEIESQTKTVDT 215
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/101 (41%), Positives = 65/101 (64%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+AII+ P+REL Q F + +K+ +R ++V GG+N Q+ +++ G ++V GT
Sbjct: 356 PEAIIVAPTRELINQI---FLEARKFAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGT 412
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
PGRL D+IQ G++ LT R+ VLDEAD +L G+ + RL
Sbjct: 413 PGRLLDVIQRGWIGLTKLRYLVLDEADRMLDMGFEPDMRRL 453
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 85.0 bits (201), Expect = 2e-15
Identities = 50/114 (43%), Positives = 66/114 (57%)
Frame = +1
Query: 124 DIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNC 303
+I +N QAII+ P+RELA Q + K YL PKI L V GG + QI L
Sbjct: 65 NIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYL--PKIDVLPVYGGQPIDRQIKALQK 122
Query: 304 GVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
GV +++GTPGR+ D I G LSL + + +LDEAD +L G+ E IE + IP
Sbjct: 123 GVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIP 176
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 84.6 bits (200), Expect = 3e-15
Identities = 59/177 (33%), Positives = 88/177 (49%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G+ I QA K A + I P PQ +I+ P+RELA Q T F + L
Sbjct: 60 GHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQL- 118
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
P + + V GG + Q+ L G ++V TPGRL D ++ L+ + VLDEAD
Sbjct: 119 -PGVGVVAVYGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEQLLSTVKHLVLDEADE 177
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDL 582
+LK G+ E +E + +P+ Q V+ SATL ++++AEK +H P V +
Sbjct: 178 MLKLGFMEDLEVIFAALPE------SRQTVLFSATL-PHSIREIAEKHLHEPQHVKI 227
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 84.6 bits (200), Expect = 3e-15
Identities = 61/188 (32%), Positives = 93/188 (49%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +I+EP+RELA Q F K Y N ++ L++GG++ Q +L G DV++ T
Sbjct: 78 PRTLILEPTRELAAQVKENFDK---YGINHRLNVALLIGGVSFDHQDRKLERGADVLIAT 134
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D + G L L V+DEAD +L G+ IER I K+T R Q +
Sbjct: 135 PGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIPDIER----ICKLTPFTR--QTLFF 188
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTLRKHVQTD 687
SAT+ A ++ K+ E+ +H P V++ E + T + LRK + +
Sbjct: 189 SATM-APEIIKLTEQFLHSPVCVEITKESSTARTITQRLVKSGSKAWHKRAVLRKLIHDE 247
Query: 688 GVHAKDNI 711
K+ I
Sbjct: 248 NKELKNAI 255
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 84.6 bits (200), Expect = 3e-15
Identities = 45/114 (39%), Positives = 67/114 (58%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
+ P N QA+++ P+RELA QT +F++ KY + + + + GG ++ Q+ L
Sbjct: 67 LDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNV--VPIYGGQPIERQLRALKGT 124
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
V VV+GTPGR+ D I+ G L L F+LDEAD +L G+ E IE + R PK
Sbjct: 125 VQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPK 178
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 84.2 bits (199), Expect = 4e-15
Identities = 54/149 (36%), Positives = 84/149 (56%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+AII+ P+RELA Q F F K L + +GG ++ Q+ L+ GVD++V TP
Sbjct: 178 RAIILSPTRELALQIHEAFVSFGKRLP---LNFTHAIGGAPIRKQMRDLSKGVDILVATP 234
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRLEDL+ L L +F VLDEAD +L G+ ++R+ I K+ D Q ++ S
Sbjct: 235 GRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRI---ISKVNKD---RQTLLFS 288
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDA 597
AT+ + ++KK+ E + P V + E++
Sbjct: 289 ATM-SKEIKKLTETYLTDPVQVSVTPENS 316
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 84.2 bits (199), Expect = 4e-15
Identities = 41/108 (37%), Positives = 63/108 (58%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P A+II PSRELA Q + KF Y R + VVGG N + Q +L GV++++
Sbjct: 656 DGPYALIIAPSRELAIQIFDETNKFASYCS---CRTVAVVGGRNAEAQAFELRKGVEIII 712
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
GTPGR+ D ++ Y L C + +LDEAD ++ G+ + + + +IP
Sbjct: 713 GTPGRIHDCLEKAYTVLNQCNYVILDEADRMMDMGFEDSVHFILDKIP 760
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 84.2 bits (199), Expect = 4e-15
Identities = 55/140 (39%), Positives = 81/140 (57%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQA+II P+REL Q + + KY+ K++ L V GG ++ +QI QL GV V+V T
Sbjct: 72 PQALIICPTRELCLQVSEEIKRIGKYM---KVKVLAVYGGQSIGNQIAQLRRGVHVIVAT 128
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D I+ G + L VLDEAD +L G+ + IER+ +P+ R Q ++
Sbjct: 129 PGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPE------RRQTMLF 182
Query: 508 SATLHAFQVKKMAEKLMHFP 567
SAT+ + + ++A K M P
Sbjct: 183 SATV-SKPILRIARKYMRNP 201
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 83.8 bits (198), Expect = 5e-15
Identities = 53/167 (31%), Positives = 95/167 (56%)
Frame = +1
Query: 145 APQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
A + ++I P+REL+ Q + + Y +N I ++VGG +++ Q L GVD+V+
Sbjct: 73 ALRGLVIAPTRELSIQI---YEDLQSYAKNMGINIAVLVGGKDLESQQKILKEGVDIVIA 129
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGR+ + + G LSL+H FVLDEAD +L G+ + I R+H +PK R Q ++
Sbjct: 130 TPGRVLEHVDKG-LSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPK------RHQTLL 182
Query: 505 CSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQK 645
SAT + +V+K+++ ++ P +++ +++ +T D +K
Sbjct: 183 FSATF-SDKVRKLSKLILTKPAFIETSKKNSTVDTINQVAYLVDTEK 228
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 83.8 bits (198), Expect = 5e-15
Identities = 49/144 (34%), Positives = 81/144 (56%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+++II P+RELA Q F K Y + + ++ GG+N Q L G+D+++ TP
Sbjct: 157 RSLIITPTRELAIQIGESF---KAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATP 213
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DL+ G+L L + FFVLDEAD +L G+ I ++ ++PK + Q + S
Sbjct: 214 GRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPK------KKQSLFFS 267
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDL 582
AT+ ++ ++A ++H P V +
Sbjct: 268 ATMPP-EITRLAASILHNPVEVSV 290
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 83.8 bits (198), Expect = 5e-15
Identities = 43/106 (40%), Positives = 67/106 (63%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P AII+ P+RELA+Q + KF K L I+ + V+GG + +DQ +L GV+VV+ T
Sbjct: 379 PYAIIMAPTRELAQQIEEETNKFGKLLG---IKTVSVIGGASREDQGMKLRMGVEVVIAT 435
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
PGRL D+++ YL L C + +LDEAD +L G+ ++++ +P
Sbjct: 436 PGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMP 481
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 83.8 bits (198), Expect = 5e-15
Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P A+++ P+RELA QT + + +K+ IR ++ GG V+ QI L+ G D++V T
Sbjct: 285 PVALVLSPTRELAIQT---YEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIVAT 341
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL--HRQIPKITSDGRRLQMV 501
PGRL DLI G ++L +F +LDEAD +L G+ I + ++P + DGR Q V
Sbjct: 342 PGRLRDLIDRGKVNLKLIKFLILDEADRMLDMGFAPQIREIVEDSEMPH-SLDGR--QTV 398
Query: 502 VCSATLHAFQVKKMAEKLMH 561
+ SAT +++++A+ +H
Sbjct: 399 MFSATFPR-EIQQLAKDFLH 417
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 83.4 bits (197), Expect = 7e-15
Identities = 54/144 (37%), Positives = 80/144 (55%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+I+ P+RELA Q + K K+ KIR L + GG ++ QI L GV VV+GTP
Sbjct: 75 QALILTPTRELAIQVSGEIQKLSKH---KKIRTLPIYGGQSIVHQIKALKQGVQVVIGTP 131
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR+ D ++ L L H +LDEAD +L G+ + IE + RQ+ Q ++ S
Sbjct: 132 GRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVK------NERQTLLFS 185
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDL 582
AT+ +KK++ K M+ P V +
Sbjct: 186 ATMPP-AIKKLSRKYMNDPQTVSI 208
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 83.4 bits (197), Expect = 7e-15
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGI-NVKDQINQLNCGVDVVVG 324
P A+++ P+RELA Q + TKF Y N I+ ++ GG N +DQ+N+L G +++
Sbjct: 223 PCALVLSPTRELAIQIHKEATKFS-YKSN--IQTAILYGGRENYRDQVNRLRAGTHILIA 279
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
TPGRL D+I+ G++ L CR+ VLDEAD +L G+ I ++
Sbjct: 280 TPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 321
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 83.0 bits (196), Expect = 9e-15
Identities = 55/151 (36%), Positives = 82/151 (54%)
Frame = +1
Query: 106 AAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQ 285
A + + D +P+A+I+ P+RELA Q + + K+ K+ L + GG + Q
Sbjct: 61 AIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKH---EKLSVLPIYGGQPIDRQ 117
Query: 286 INQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
I L GVD+VVGTPGR+ DLI+ L L F VLDEAD +L G+ I+ L +
Sbjct: 118 IRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGF---IDDLEEIVK 174
Query: 466 KITSDGRRLQMVVCSATLHAFQVKKMAEKLM 558
+ +D Q ++ SAT+ Q+KK+A M
Sbjct: 175 SLKTD---RQTLLFSATMPP-QIKKLARNYM 201
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 83.0 bits (196), Expect = 9e-15
Identities = 47/147 (31%), Positives = 76/147 (51%)
Frame = +1
Query: 28 PFKXPPPNGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQF 207
P+ N +A++Q + + D+K N PQ++I+ P+REL Q
Sbjct: 34 PYLLGENNDVVALAQTGTGKTAAFGLPLLQQIDVK--NRVPQSLILCPTRELCLQIAGDL 91
Query: 208 TKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRF 387
+ KY++ K+ L V GG ++ QI L GV ++V TPGRL DL++ +SL+
Sbjct: 92 NDYSKYIDGLKV--LPVYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHN 149
Query: 388 FVLDEADGLLKAGYGELIERLHRQIPK 468
V+DEAD +L G+ + I + +PK
Sbjct: 150 IVMDEADEMLNMGFTDSINAILADVPK 176
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 83.0 bits (196), Expect = 9e-15
Identities = 49/165 (29%), Positives = 88/165 (53%)
Frame = +1
Query: 115 ASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQ 294
A+T P + +A+I+ P+RELA+Q + K+ +R +V GG+++ Q+ +
Sbjct: 77 ANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTP---LRSAVVFGGVDMNPQMAE 133
Query: 295 LNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKIT 474
L GV++++ TPGRL D +Q +L + VLDEAD +L G+ ++R+ +PK
Sbjct: 134 LRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK-- 191
Query: 475 SDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
Q ++ SAT ++KK+A + P +++ +A T
Sbjct: 192 ----ERQTLLFSATFSP-EIKKLASTYLRNPQTIEVARSNAAAST 231
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 83.0 bits (196), Expect = 9e-15
Identities = 54/160 (33%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = +1
Query: 124 DIKPVNNAP-QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLN 300
D+ VN+ QA+I+ P+RELA+Q C Q + K+L K+ + V GG N+ +QI +
Sbjct: 74 DLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLG--KLNVVPVFGGANIMNQIRDIR 131
Query: 301 CGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSD 480
G ++V TPGRL DL++ + L ++ VLDEAD +L G+ E I+ + + +
Sbjct: 132 RGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFILSK----SDT 187
Query: 481 GRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAV 600
GR + + SAT+ A ++K++ + M P V + ++ V
Sbjct: 188 GRNIWLF--SATM-AREIKRIVDTYMVQPEEVRINPKNIV 224
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 82.6 bits (195), Expect = 1e-14
Identities = 48/144 (33%), Positives = 83/144 (57%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+++ P+RELA Q F + +Y ++ ++ GG+ K Q + L G+ ++V TP
Sbjct: 73 KALVLTPTRELAIQIGESFEAYGRYTG---LKHAVIFGGVGQKPQTDALRSGIQILVATP 129
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DLI G++SL+ FFVLDEAD +L G+ I+R+ + +P R Q + S
Sbjct: 130 GRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLP------ARRQTLFFS 183
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDL 582
AT+ +++ +A ++ P V++
Sbjct: 184 ATMPP-EIETLANSMLTKPEKVEV 206
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 82.6 bits (195), Expect = 1e-14
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Frame = +1
Query: 106 AAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQ 285
AA + + +A+I+ P+RELA Q F F +YL +R GG V
Sbjct: 24 AAFGLPILNSLKEGEKALILAPTRELALQIRDNFRDFARYLN---VRTFAFYGGTKVFGD 80
Query: 286 INQLNCG-VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
+ L G VDVV+GTPGR++DLI+ G L R+FVLDE D +L + E I+ ++ Q+
Sbjct: 81 LKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLDEVDVMLDMNFKEDIDFIYSQL 140
Query: 463 PKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
P+ Q+ SAT +V++++ + P ++ ++ + P+
Sbjct: 141 PE------EKQVFFVSATFPK-EVRELSHRYTKKPEFIKVESRELEPQ 181
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 82.2 bits (194), Expect = 2e-14
Identities = 51/168 (30%), Positives = 88/168 (52%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+++ P+RELA Q + KYL +R +V GG+ + QI +L GVDV+V TP
Sbjct: 75 RALVLTPTRELAAQVSESVETYGKYLP---LRSAVVFGGVPINPQIQKLRHGVDVLVATP 131
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DL+Q + VLDEAD +L G+ I+++ +P + Q ++ S
Sbjct: 132 GRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLP------AKRQNLMFS 185
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSS 654
AT + +++++A+ L++ P + + +A T D + S+
Sbjct: 186 ATF-SDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSA 232
>UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n=2;
Dugesia japonica|Rep: Nucleolar RNA helicase II/Gu
protein - Dugesia japonica (Planarian)
Length = 627
Score = 82.2 bits (194), Expect = 2e-14
Identities = 40/124 (32%), Positives = 70/124 (56%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ I++ P+REL Q + F L + ++ L + GG++ + Q L GVD++ G
Sbjct: 120 PKVIVMAPTRELVSQIASDFES----LISKNLKVLSIYGGVSYEKQTTALKNGVDIIAGA 175
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ DLI G+L L+ + +LDE D +L G+ +++E + I +D + Q ++
Sbjct: 176 PGRVRDLINKGHLDLSKIEYVILDEVDRMLDMGFSDIVEEILSYIYPSETDKKGPQTLLF 235
Query: 508 SATL 519
SAT+
Sbjct: 236 SATM 239
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 82.2 bits (194), Expect = 2e-14
Identities = 45/122 (36%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Frame = +1
Query: 100 VIAAVASTDIKPV--NNAPQAIIIEPSRELAEQTCTQFTKFKKYLEN---PKIRELLVVG 264
++ A+ + P+ P +II PSRELA+QT +F L+ P+IR LL +G
Sbjct: 241 IMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 300
Query: 265 GINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIE 444
G++++ Q++ + GV +VV TPGRL+DL+ ++L +CR+ LDEAD L+ G+ + I
Sbjct: 301 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIR 360
Query: 445 RL 450
+
Sbjct: 361 EV 362
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 82.2 bits (194), Expect = 2e-14
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLEN---PKIRELLVVGGINVKDQINQLNCGV 309
N P +II PSRELA+QT + K+L+ P+IR L +GG+ V + ++ ++ GV
Sbjct: 251 NEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGV 310
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGE 435
+VV TPGRL D++ L+L CR+ +DEAD ++ G+ E
Sbjct: 311 HIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEE 352
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 81.8 bits (193), Expect = 2e-14
Identities = 50/145 (34%), Positives = 81/145 (55%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+ +++ P+RELA Q F + E+ + + + GG + ++QI L VDVVVGTP
Sbjct: 122 KVLVMTPTRELATQVAESFKSYSS--ESTNFKTIAIYGGTDYRNQIYALKRKVDVVVGTP 179
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR+ D I+ G + VLDEAD +L G+ E IE + Q+PK QMV+ S
Sbjct: 180 GRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPK------NKQMVLFS 233
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLK 585
AT+ +++ +A+K ++ P + +K
Sbjct: 234 ATM-PNEIRNIAKKYLNDPAEILIK 257
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 81.8 bits (193), Expect = 2e-14
Identities = 55/153 (35%), Positives = 81/153 (52%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+++ P+RELA Q+ F ++ + V GG QI L G VVVGTP
Sbjct: 115 QALVLAPTRELAMQSAQAIEDFAA--RTARLDVVPVYGGSPYGPQIGALKRGAQVVVGTP 172
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR+ DLI+ G L L+H R VLDEAD +L+ G+ E +E + P D R + S
Sbjct: 173 GRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAP----DDRLTALF--S 226
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
AT+ A ++K+A + + P V + E + +T
Sbjct: 227 ATMPA-AIEKVAREHLKDPVKVAVSTESSTVDT 258
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 81.8 bits (193), Expect = 2e-14
Identities = 45/119 (37%), Positives = 71/119 (59%)
Frame = +1
Query: 112 VASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQIN 291
+A DIK PQA+++ P+RELA Q F ++ Y+ P L + GG + Q++
Sbjct: 66 LARIDIK--QTTPQALVLAPTRELAIQVAEAFQRYATYI--PGFHVLPIYGGQSYGAQLS 121
Query: 292 QLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
L GV VVVGTPGR+ D ++ G L L+ + VLDEAD +L+ G+ + +E + ++ P+
Sbjct: 122 ALRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPE 180
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 81.8 bits (193), Expect = 2e-14
Identities = 49/153 (32%), Positives = 85/153 (55%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I N PQA+++ P+RELA Q F + + ++N + L + GG ++++Q+ L
Sbjct: 67 IDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHV--LPIYGGADMRNQLRALKQN 124
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
V+VGTPGR+ D ++ G L L+ + VLDEAD +L+ G+ E I+ + PK
Sbjct: 125 PQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPK------ 178
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLK 585
Q + SAT+ Q+K++ ++ P +++K
Sbjct: 179 DKQTALFSATM-PHQIKRITDQYQKDPVKIEIK 210
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 81.8 bits (193), Expect = 2e-14
Identities = 50/148 (33%), Positives = 84/148 (56%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A++I P+RELA Q F + KY +R V GG++++ Q L GVD++V TP
Sbjct: 77 KALVITPTRELAIQILENFKSYSKY---SNLRSTAVFGGVSLEPQKEILAKGVDILVATP 133
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DL G + L+ FVLDEAD +L G+ I+++ + P R+ Q ++ S
Sbjct: 134 GRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCP------RKKQTLLFS 187
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGED 594
AT+ ++ ++++ ++ T VD+ E+
Sbjct: 188 ATIPE-KIDELSKSIVKNATKVDINPEE 214
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 81.8 bits (193), Expect = 2e-14
Identities = 53/166 (31%), Positives = 81/166 (48%)
Frame = +1
Query: 67 SQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIR 246
SQ Q + D +I+ P+REL Q + F+K L IR
Sbjct: 375 SQEWNNEPTQGATQRSSGNDTHEAERTVYGLILLPTRELCMQVVDEIKAFEKELH---IR 431
Query: 247 ELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAG 426
+ V GG+ QI+ L G D+VV TPGRL DL++ G + L C + V+DEAD LL G
Sbjct: 432 SVAVYGGVPKYTQISNLKKGADIVVATPGRLLDLLESGVIHLLRCIYVVIDEADRLLDMG 491
Query: 427 YGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHF 564
+ + ++++ Q+ R Q++ +AT QV+K+A + F
Sbjct: 492 FEKQLKKIMTQV------NRNKQLLFFTATWPE-QVRKLAYQFSSF 530
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 81.8 bits (193), Expect = 2e-14
Identities = 56/164 (34%), Positives = 88/164 (53%)
Frame = +1
Query: 103 IAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKD 282
I V ++K N+A QA+++ P+RELA Q + K ++R L + GG +++
Sbjct: 58 IPIVEKVNVK--NSAVQALVVAPTRELAIQVSEELYKIGAV---KRVRVLPIYGGQDIER 112
Query: 283 QINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
QI L V+VGTPGR+ D I G L L H VLDEAD +L G+ E IE + +
Sbjct: 113 QIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHV 172
Query: 463 PKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
P Q ++ SAT+ ++++AE+ M+ P V +K ++
Sbjct: 173 P------AERQTLLFSATM-PDPIRRIAERFMNEPELVKVKAKE 209
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 81.4 bits (192), Expect = 3e-14
Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P I+ P RELAEQ T+ KF KYL IR + V GG + +QI L G ++VV T
Sbjct: 214 PIGIVFAPIRELAEQINTEINKFGKYL---NIRSVAVFGGTGISNQIGALKRGTEIVVCT 270
Query: 328 PGRLEDLI---QGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
PGR+ D++ G +L F VLDEAD + G+G I+R+ I I D Q+
Sbjct: 271 PGRMIDILVTNNGRITNLRRVTFVVLDEADRMFDMGFGPQIKRI---IEGIRPD---KQI 324
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
V+ SAT V++ A + + P + G V T
Sbjct: 325 VMFSATF-PISVEQHAREFLKKPIEIICGGRSQVSNT 360
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 81.4 bits (192), Expect = 3e-14
Identities = 45/126 (35%), Positives = 74/126 (58%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
N QA+++ P+RELA Q C + K N ++ L V GG+++ +QI L VD+VV
Sbjct: 70 NDVQALVLTPTRELALQVCNEIDSLKG---NKRLNLLPVYGGVSIGNQIRALKRRVDLVV 126
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
GTPGR+ D + G L +T ++ V+DEAD +L G+ E +E + ++ + Q++
Sbjct: 127 GTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMI------LSKTNKEKQIL 180
Query: 502 VCSATL 519
+ SAT+
Sbjct: 181 MFSATM 186
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 81.4 bits (192), Expect = 3e-14
Identities = 47/140 (33%), Positives = 72/140 (51%)
Frame = +1
Query: 49 NGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYL 228
NG + A + K + ++ P APQ +++ P+RELA Q T F K++
Sbjct: 42 NGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHM 101
Query: 229 ENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEAD 408
+ + + GG Q+ L G +VVGTPGRL D ++ G L L+ VLDEAD
Sbjct: 102 RGVNV--VALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEAD 159
Query: 409 GLLKAGYGELIERLHRQIPK 468
+L+ G+ E +E + QIP+
Sbjct: 160 EMLRMGFIEDVETIMAQIPE 179
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 81.0 bits (191), Expect = 3e-14
Identities = 50/145 (34%), Positives = 81/145 (55%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +I+EP+RELA Q F + Y K+ L++GG++ DQ +L GVDV++ T
Sbjct: 73 PRTLILEPTRELAAQVKENFDR---YGAGQKLNVALLIGGVSFGDQDAKLTRGVDVLIAT 129
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D + G L LT V+DEAD +L G+ IER+ + +P Q +
Sbjct: 130 PGRLLDHTERGGLLLTGVELLVIDEADRMLDMGFIPDIERICKLVPFTR------QTLFF 183
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDL 582
+AT+ +++++ E +H P V++
Sbjct: 184 TATMPP-EIRRITETFLHNPQKVEV 207
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 81.0 bits (191), Expect = 3e-14
Identities = 47/140 (33%), Positives = 77/140 (55%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
+ +P+ +++ P+ ELA Q F + K+ GG + + QIN + G+D++
Sbjct: 209 SRSPKVLVLAPTGELANQVAKDFKDITR-----KLSVACFYGGTSYQSQINHIRNGIDIL 263
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
VGTPGR++D +Q G L L+ R VLDE D +L G+ E +E + + K S+ Q
Sbjct: 264 VGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNP-QT 322
Query: 499 VVCSATLHAFQVKKMAEKLM 558
++ SAT + V K+A+K M
Sbjct: 323 LLFSATCPQW-VYKVAKKYM 341
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 80.6 bits (190), Expect = 5e-14
Identities = 53/160 (33%), Positives = 87/160 (54%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
+ + P+A+I+ P+RELA+Q + + + +VGG+ Q+ L GV
Sbjct: 443 RQMGRKPRALILAPTRELAQQIDRTIQPIARSVG---LFTTTIVGGVPQYKQVAALTRGV 499
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
DV++ TPGR+EDLI+ G L L+ + VLDEAD + G+ E ++R+ R+ TS+G
Sbjct: 500 DVIIATPGRVEDLIEQGRLDLSQVKVTVLDEADHMCDLGFLEPVQRILRE----TSEGG- 554
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
Q ++ SATL V + ++ + P ++ GED T
Sbjct: 555 -QKLLFSATLDK-GVATLVKEFLVDPAVHEVAGEDQASST 592
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 80.6 bits (190), Expect = 5e-14
Identities = 53/161 (32%), Positives = 85/161 (52%)
Frame = +1
Query: 124 DIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNC 303
D+K +A+I+ P+RELA+QT Q F ++ I+ LV GG + K+Q L
Sbjct: 246 DLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTY---IKAGLVTGGEDFKEQAAMLRK 302
Query: 304 GVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDG 483
DV++GTPGRL + + G L L+H + +LDEAD +L G+ E +ERL ++
Sbjct: 303 VPDVLIGTPGRLLEQLNAGNLDLSHVQVMILDEADRMLDMGFAEDMERLCKECE------ 356
Query: 484 RRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
R Q ++ SAT ++ + K++ P + L + E
Sbjct: 357 NREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAE 397
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 80.6 bits (190), Expect = 5e-14
Identities = 38/108 (35%), Positives = 64/108 (59%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P A+I+ PSRELA Q + KF + R + VVGG N + Q +L G ++++
Sbjct: 414 DGPYALILAPSRELALQIYDETVKFSAFCS---CRSVAVVGGRNAESQAFELRKGCEIII 470
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
GTPGR++D + Y L+ C + +LDEAD ++ G+ ++++ + IP
Sbjct: 471 GTPGRVKDCLDRAYTVLSQCNYVILDEADRMIDMGFEDVLKYILDCIP 518
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 80.6 bits (190), Expect = 5e-14
Identities = 48/137 (35%), Positives = 79/137 (57%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P A+I+ P+RELA C + +K+ ++ ++ GG V QI +L GVD++V T
Sbjct: 225 PLAVILSPTRELA---CQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVAT 281
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL++ G +SL RF LDEAD +L G+ I ++ +Q+ + G R Q ++
Sbjct: 282 PGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQM-DMPPPGVR-QTMLF 339
Query: 508 SATLHAFQVKKMAEKLM 558
SAT +++++A +
Sbjct: 340 SATFPR-EIQRLASDFL 355
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 80.2 bits (189), Expect = 6e-14
Identities = 45/135 (33%), Positives = 80/135 (59%)
Frame = +1
Query: 157 IIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGR 336
+++ P+RELA Q FT + ++ P I+ ++GG N+ QI +L G+DV++ TPGR
Sbjct: 78 LVLVPTRELALQVEKAFTNYAEFSLRP-IKTATLIGGENIDGQIRKLRMGLDVLIATPGR 136
Query: 337 LEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSAT 516
+ +LI G + L +LDEAD +L G+ + ++ L +PK + Q ++ SAT
Sbjct: 137 IIELINLGEVRLVELEMLILDEADKMLDLGFADELKELLEALPK------KRQNLLFSAT 190
Query: 517 LHAFQVKKMAEKLMH 561
L +V+++AE+ ++
Sbjct: 191 LPQ-KVQQLAEEFLN 204
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 80.2 bits (189), Expect = 6e-14
Identities = 50/151 (33%), Positives = 82/151 (54%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P +++ P+RELA Q + KF + + +I + GG Q+ L+ GVDVVV
Sbjct: 221 SGPTVLVLAPTRELATQILEEAVKFGR---SSRISSTCLYGGAPKGPQLRDLDRGVDVVV 277
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
TPGRL D+++ +SL + VLDEAD +L G+ I ++ ++IP R Q +
Sbjct: 278 ATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPP------RRQTL 331
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
+ +AT +V+++AE L+ P V + D
Sbjct: 332 MYTATWPK-EVRRIAEDLLVHPVQVTIGSVD 361
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 80.2 bits (189), Expect = 6e-14
Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +I+ P+RELA Q + TKF +P IR L GG +K QIN + GV++V+ T
Sbjct: 312 PLGLILSPTRELALQIHEEVTKFTS--GDPSIRSLCCTGGSELKRQINDIKRGVEIVIAT 369
Query: 328 PGRLEDLI---QGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
PGR DL+ G ++ F V+DEAD L G+ E QI K + Q
Sbjct: 370 PGRFIDLLSLNSGNLINPKRIVFVVMDEADRLFDLGF----EPQVNQIMKCIRPDK--QC 423
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
V+ SAT ++K A K++H P ++ + + + E
Sbjct: 424 VLFSATF-PNKLKSFASKILHDPVYITVNSKSLINE 458
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 79.8 bits (188), Expect = 8e-14
Identities = 49/145 (33%), Positives = 81/145 (55%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQ +++ P+RELA Q F ++ + R L V GG + Q+ L GV V+VGT
Sbjct: 84 PQVLVLAPTRELAIQVAEAFQRYAASISG--FRVLPVYGGQSYGQQLAALKRGVHVIVGT 141
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ D ++ G L L+ + VLDEAD +L+ G+ E +E + R++P Q+ +
Sbjct: 142 PGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLP------ASRQVALF 195
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDL 582
SAT+ Q++++A+ + P V +
Sbjct: 196 SATMPP-QIRRIAQTYLQDPIEVTI 219
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 79.8 bits (188), Expect = 8e-14
Identities = 47/114 (41%), Positives = 65/114 (57%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I + + QA+++ P+RELA Q T K+L +R L V GG ++ Q + L G
Sbjct: 67 IDAADRSVQALVLCPTRELALQVANGLTALAKHLRG--VRILSVYGGQPIEPQASALRRG 124
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
VVVGTPGR+ D I G L L R VLDEAD +L G+ E IER+ ++P+
Sbjct: 125 AQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPE 178
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 79.8 bits (188), Expect = 8e-14
Identities = 52/150 (34%), Positives = 82/150 (54%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
NA A++I P+RELA+Q + K L+N ++ L++GG + Q+NQL +V+
Sbjct: 69 NASTALVIVPTRELAQQVTNEIGKL--LLKNSVLKIALLIGGEPIFRQLNQLQRRPRIVI 126
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
GTPGR+ D I+ L + VLDE D + G+G IE + + +PK+ Q +
Sbjct: 127 GTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMR------QNL 180
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
+ SATL + K+AEK + P V ++ E
Sbjct: 181 MFSATLPG-DIVKLAEKYSNQPERVSVENE 209
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 79.8 bits (188), Expect = 8e-14
Identities = 51/153 (33%), Positives = 80/153 (52%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+A+I+EP+RELA QT + + L ++ ++ GG + + Q+ ++ GVD++V T
Sbjct: 91 PRALILEPTRELAAQTAAVCRQLGRRLS---LKTRVICGGTSREQQVQSVSDGVDIIVAT 147
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
GRL DL+ L L H + VLDEAD LL + + L P + Q V C
Sbjct: 148 HGRLLDLVMQADLVLEHLTYLVLDEADRLLDEDFSASMTALTPYFP-----DQPPQTVFC 202
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
SATL V +A+++ P V++ E P+
Sbjct: 203 SATLPE-PVMDLAKRVTRNPVRVEIAAESFTPK 234
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 79.8 bits (188), Expect = 8e-14
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Frame = +1
Query: 112 VASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQIN 291
+ + D+ + APQ +++ P+RELA Q QF F K + P + + GG QI
Sbjct: 66 INNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNV--PNLDVACIYGGQEYGSQIR 123
Query: 292 QLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKI 471
L GV VVVGT GR+ D I+ G L L + R VLDEAD +L+ G+ I+ + + +
Sbjct: 124 ALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGF---IDDVKFVLSHV 180
Query: 472 TSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDP-QKD 648
+ + +RL + SAT+ + + E+ + P + +K + T +K
Sbjct: 181 SDECQRL---LFSATIPT-DIADIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKI 236
Query: 649 SSWQTLRKHVQTDGV 693
+ L + +TDGV
Sbjct: 237 DALDRLLETEETDGV 251
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 79.8 bits (188), Expect = 8e-14
Identities = 40/113 (35%), Positives = 67/113 (59%)
Frame = +1
Query: 133 PVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVD 312
P +++I+ P+RELA Q F + K+L +R ++ GG+ + Q+++L GVD
Sbjct: 68 PAGRPIRSLILTPTRELALQIQESFEAYGKHLP---LRSAVIFGGVGQQPQVDKLKKGVD 124
Query: 313 VVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKI 471
++V TPGRL DL G++ L+ FVLDEAD +L G+ + R+ + +P +
Sbjct: 125 ILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAV 177
>UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Probable ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 410
Score = 79.4 bits (187), Expect = 1e-13
Identities = 54/149 (36%), Positives = 81/149 (54%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
K P+AI++ P RELAEQ + F K L+ + + +VGG + K Q QL
Sbjct: 66 KSPTRQPKAIVLVPVRELAEQIASFFDKLAAGLD---LNAVAIVGGEDFKKQEKQL-ARA 121
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
D+VV TPGRL ++ + L VLDEAD +L+ G+ E ++ QI + + R
Sbjct: 122 DLVVATPGRLIPHLENRSIELDSLDLLVLDEADRILETGFKEALD----QILTLCPEAR- 176
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPTWV 576
Q ++ SATL V+K+AE+++ P WV
Sbjct: 177 -QTLLVSATLPT-SVRKLAERILQEPEWV 203
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 79.4 bits (187), Expect = 1e-13
Identities = 46/147 (31%), Positives = 78/147 (53%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+ +++ P+RELA+Q F + + N +++ + GG++V Q+ L G DV+V TP
Sbjct: 85 RCLVLVPTRELAQQVADSFLSYASHF-NGQLKIVAAFGGVSVNLQMQSLRAGADVLVATP 143
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DL+ L L VLDEAD +L G+ + + ++ +P + Q ++ S
Sbjct: 144 GRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEALP------AKKQTLLYS 197
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGE 591
AT +V+ + KL+H P L+ E
Sbjct: 198 ATFPE-EVRALTAKLLHQPLEYHLQSE 223
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 79.4 bits (187), Expect = 1e-13
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Frame = +1
Query: 145 APQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
AP+ +I+ PSRELA Q F ++ ++ +I+ L++GG Q QL+ D++V
Sbjct: 89 APKVLILAPSRELARQI---FNVVEQLTKHTRIQSHLIIGGTPYGMQQQQLSEPCDILVA 145
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGRL +L + +L LT +FV+DEAD +L G+ I + +++PK Q ++
Sbjct: 146 TPGRLVELDEKQWLDLTDVSYFVIDEADRMLDMGFVSAINCIAKELPK------EHQTLM 199
Query: 505 CSATLHAFQVKKMAEKLMHFPTWVDLKGEDA--VPETXXXXXXXXDPQKDSSWQTLRKHV 678
SATL ++ + A L++ T GE + VP D ++ + + KH+
Sbjct: 200 FSATLEGEKMGRFASALLNSETQQIRLGESSRTVPSQIRQIAYRVDSEEHK--EAVLKHL 257
Query: 679 QT 684
T
Sbjct: 258 LT 259
>UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 637
Score = 79.4 bits (187), Expect = 1e-13
Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQ---INQLN 300
K +P A+++ P+REL Q T K KK + +R + V GG++ +DQ + Q
Sbjct: 175 KKYPGSPAALVVAPTRELTLQISTVCNKLKKAVP---VRSVAVYGGVSQEDQEEALGQHT 231
Query: 301 CGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSD 480
+V+GTPGRL +++ G L L C+ VLDEAD +L G+ E + ++ +P +D
Sbjct: 232 SHAFLVIGTPGRLNAVLESGALKLDRCKILVLDEADRMLALGFEEQLLKIRDALPN-AND 290
Query: 481 GRRLQMVVCSAT 516
GR Q ++ SAT
Sbjct: 291 GR--QTLLFSAT 300
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/161 (31%), Positives = 90/161 (55%)
Frame = +1
Query: 100 VIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVK 279
V+ A+ S P + P +I+ P+RELA Q Q + + L P + L+VGG+ +
Sbjct: 229 VMRALQSESASP--SCPACLILTPTRELAIQIEEQAKELMRGL--PNMGTALLVGGMPLP 284
Query: 280 DQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQ 459
Q+++L + +V+GTPGRL ++++ + L H R V+DEAD +LK G+ + + + Q
Sbjct: 285 PQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLKMGFQQQVLDILEQ 344
Query: 460 IPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDL 582
+P D Q ++ SAT+ +++AE+L H P + +
Sbjct: 345 VP----DDH--QTLLTSATIPT-GTQQLAERLTHDPVTITI 378
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 79.0 bits (186), Expect = 1e-13
Identities = 52/149 (34%), Positives = 84/149 (56%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+I+ P+RELA Q K + I LV+GG++ QI ++ G+DV++ TP
Sbjct: 162 RALILAPTRELAVQIEQTIRNVSK---SAHISTALVLGGVSKLSQIKRIAPGIDVLIATP 218
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DL++ G + L+ R+ VLDEAD +L G+ ++R I K T R Q + S
Sbjct: 219 GRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKR----IAKATHAER--QTALFS 272
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDA 597
AT+ ++ +AE+L+ P V++ + A
Sbjct: 273 ATMPK-EIASLAERLLRDPVRVEVAPQGA 300
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/148 (34%), Positives = 82/148 (55%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+I+ P+RELA Q T+ K + L P ++ L + GG + ++Q + L GV +VVGTP
Sbjct: 117 QALILCPTRELASQVVTEIRKLGRRL--PGLKVLAMTGGQSGREQADALENGVQIVVGTP 174
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL D + + L+ + VLDEAD +L G+ + I+ + R +P G R Q V+ S
Sbjct: 175 GRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLP-----GSR-QTVLFS 228
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGED 594
AT ++ ++ K V ++ E+
Sbjct: 229 ATFPE-SIEHLSRKYQRHAQQVIIEDEE 255
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/143 (35%), Positives = 77/143 (53%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
+N P+A+I+ P+RELA Q + + + +L+ GG++ Q GVD+V
Sbjct: 298 DNRPRALILSPTRELAMQIADALSSLASSMG---LSTILIAGGMSYGPQTKAFKRGVDLV 354
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
V TPGRL DL++ G L+ VLDEAD + + G+ E + + IP +DG+RL
Sbjct: 355 VATPGRLVDLLETGDADLSGVAVTVLDEADHMAELGFMEAVGSILDAIP---ADGQRL-- 409
Query: 499 VVCSATLHAFQVKKMAEKLMHFP 567
+ SATL V K+ + MH P
Sbjct: 410 -LFSATLDG-AVNKLVRRYMHEP 430
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 79.0 bits (186), Expect = 1e-13
Identities = 47/148 (31%), Positives = 83/148 (56%)
Frame = +1
Query: 157 IIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGR 336
+++ P+RELA Q F K Y ++R + + GG+ + QI + G+D++V TPGR
Sbjct: 77 LVMAPTRELAVQISEVFKKIGAYT---RLRTVCITGGVEQEAQIAAADYGIDILVATPGR 133
Query: 337 LEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSAT 516
+ DLI ++ +T + VLDEAD +L G+ + I+ + + +P R Q + SAT
Sbjct: 134 MFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLP------ARHQTLFFSAT 187
Query: 517 LHAFQVKKMAEKLMHFPTWVDLKGEDAV 600
++ ++KK+A L+ P + + +D V
Sbjct: 188 INE-EIKKLAYSLVKNPIRIQIAPKDRV 214
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 79.0 bits (186), Expect = 1e-13
Identities = 56/171 (32%), Positives = 85/171 (49%)
Frame = +1
Query: 133 PVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVD 312
P + PQA+I+ P+RELA Q + K +I + V GG ++ Q+ +L
Sbjct: 70 PNSRNPQALILTPTRELAVQVRDEIAKLT---HGQRINVVAVYGGKPLRSQMEKLKRAPH 126
Query: 313 VVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRL 492
+VVGTPGR+ DL+ L L R VLDEAD +L G+ IE++ R+ P+
Sbjct: 127 IVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPE------ER 180
Query: 493 QMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQK 645
Q ++ SAT+ ++K+A++ M P VD + ET D K
Sbjct: 181 QTLLLSATVPP-TIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVDHSK 230
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/168 (30%), Positives = 87/168 (51%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+++ P+RELA Q + KYL +R +V GG+ + QI +L GVDV+V TP
Sbjct: 75 RALVLTPTRELAAQVSESVETYGKYLP---LRSAVVFGGVPINPQIQKLRHGVDVLVATP 131
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DL Q + VLDEAD +L G+ I+++ +P + Q ++ S
Sbjct: 132 GRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLP------AKRQNLMFS 185
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSS 654
AT + +++++A+ L++ P + + +A T D + S+
Sbjct: 186 ATF-SDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSA 232
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 79.0 bits (186), Expect = 1e-13
Identities = 48/137 (35%), Positives = 81/137 (59%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P AII+ P+REL Q + + +K+ + +R ++V GG +V Q +L G VVVGT
Sbjct: 350 PAAIIVGPTRELVNQI---YLEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGT 406
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D I G ++L+ ++ +LDEAD +L G+ I +L + G+R Q ++
Sbjct: 407 PGRLLDFIGKGKINLSKVKYLILDEADRMLDMGFEPEIRKLVTTF-DMPEKGQR-QTLMF 464
Query: 508 SATLHAFQVKKMAEKLM 558
SAT A +++++A++ +
Sbjct: 465 SATF-AAEIQQLAKEFL 480
>UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 744
Score = 79.0 bits (186), Expect = 1e-13
Identities = 52/146 (35%), Positives = 81/146 (55%)
Frame = +1
Query: 121 TDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLN 300
T IK P +++ P+REL Q + K + +N + R L + GG++V++Q NQ+
Sbjct: 137 TSIKK-KQTPYMLVVVPTRELCIQVANEINTLK-HTDN-EFRVLQIYGGVDVREQANQIR 193
Query: 301 CGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSD 480
GV++VVGTPGR+ D + G L VLDEAD +L G+ E IE++ I K
Sbjct: 194 DGVEIVVGTPGRIIDQYERGALMFHSIIATVLDEADQMLNFGFQEDIEKIFGFI-KNDKG 252
Query: 481 GRRLQMVVCSATLHAFQVKKMAEKLM 558
R Q ++ SAT+ ++ V +A K +
Sbjct: 253 EERPQNLLFSATMPSW-VHDIARKFL 277
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLEN---PKIRELLVVGGINVKDQINQLNCGVDVV 318
P +I+ PSRELA QT +F L P +R LL +GGI+++ Q+ + GV +V
Sbjct: 223 PIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIV 282
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
V TPGRL+D++ +SL CR+ LDEAD L+ G+ + I +
Sbjct: 283 VATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREV 326
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 79.0 bits (186), Expect = 1e-13
Identities = 49/155 (31%), Positives = 87/155 (56%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
+ P A+I+ P+RELA Q Q + L P+++ +L+VGG+ + Q+ +L V V+
Sbjct: 269 SKTPSALILTPTRELAIQIERQAKELMSGL--PRMKTVLLVGGLPLPPQLYRLQQHVKVI 326
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
+ TPGRL D+I+ + L + V+DEAD +LK G+ + + + IP Q
Sbjct: 327 IATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIP------NDCQT 380
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVP 603
++ SAT+ ++++A +L+H P + + GE +P
Sbjct: 381 ILVSATIPT-SIEQLASQLLHNPVRI-ITGEKNLP 413
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 78.6 bits (185), Expect = 2e-13
Identities = 53/150 (35%), Positives = 80/150 (53%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+++ P+RELA+Q Y + L+V GG + + Q+ L G VVVGTP
Sbjct: 125 QALVLAPTRELAQQVGDALAT---YSGDDGRNVLVVYGGSSYQAQVGGLRRGARVVVGTP 181
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL DLI+ G L L + VLDEAD +L G+ + IE + Q PK Q ++ S
Sbjct: 182 GRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPK------DRQTMLFS 235
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAV 600
ATL + +V +A + +H P + + + +
Sbjct: 236 ATLSS-RVMSIANRYLHSPESISISPKQMI 264
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 78.6 bits (185), Expect = 2e-13
Identities = 48/157 (30%), Positives = 79/157 (50%)
Frame = +1
Query: 112 VASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQIN 291
+A+T N + +++ P+REL Q F F ++ +R + GG++ Q+
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRH---QPVRVTTIFGGVSQVHQVK 125
Query: 292 QLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKI 471
L GVD++V PGRL DLI+ G L+ VLDEAD +L G+ + IER+ +P+
Sbjct: 126 ALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPE- 184
Query: 472 TSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDL 582
V+ SAT+ + + E L+ P V++
Sbjct: 185 -----DRHTVLFSATMPK-SIAALVESLLRNPAKVEI 215
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/100 (39%), Positives = 61/100 (61%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+I+ P+REL +Q Q KF KY+++ E V GG + Q+N L +V+ TP
Sbjct: 73 QALILSPTRELVQQIKKQLFKFTKYVDDRIFLEA-VFGGEKIDRQMNNLKRTTHIVIATP 131
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
GRL DLI+ G + ++H + +LDEAD +L G+ + + R+
Sbjct: 132 GRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRI 171
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 78.6 bits (185), Expect = 2e-13
Identities = 47/160 (29%), Positives = 87/160 (54%)
Frame = +1
Query: 115 ASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQ 294
A+ P + + +++ P+RELA+Q + Y++N +R ++ GG+N+ Q
Sbjct: 95 ATASTSPAMHPVRMLVLTPTRELADQIDQNV---QSYIKNLPLRHTVLFGGMNMDKQTAD 151
Query: 295 LNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKIT 474
L G ++VV T GRL D ++ +SL VLDEAD +L G+ + I ++ + +PK
Sbjct: 152 LRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPK-- 209
Query: 475 SDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
+ Q ++ SAT A ++K+A+ M+ P V++ ++
Sbjct: 210 ----QRQTLLFSATFSA-PIRKLAQDFMNAPETVEVAAQN 244
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 78.2 bits (184), Expect = 2e-13
Identities = 49/146 (33%), Positives = 80/146 (54%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
KP ++++ P+RELA Q + KYL +R V GG++++ Q+ +L GV
Sbjct: 91 KPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLA---LRSDAVFGGVSIRPQVKRLQGGV 147
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
D++V TPGRL DLI + + + VLDEAD +L G+ I+++ +PK
Sbjct: 148 DILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPK------N 201
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFP 567
Q ++ SAT + +KK+A L++ P
Sbjct: 202 RQNMMFSATF-STPIKKLALGLLNDP 226
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/106 (36%), Positives = 66/106 (62%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+++++ P+RELA Q F + K++ K+ + L++GG++ K+Q ++ GVDV++ T
Sbjct: 83 PRSLVLCPTRELAAQVAENFDIYAKHV---KLTKALLIGGVSFKEQEQAIDKGVDVLIAT 139
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
PGRL D + G L L + V+DEAD +L G+ IER+ +P
Sbjct: 140 PGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVP 185
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/148 (33%), Positives = 86/148 (58%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
NAPQ +I+ P+RELA Q + + ++ + L + GG + Q+ L GV +V
Sbjct: 79 NAPQLLILAPTRELAIQVSEAVQTYARGMKGFHV--LPIYGGQSYDIQLRPLKRGVHAIV 136
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
GTPGR+ D I+ L L + + FVLDEAD +LK G+ + I+ + ++IP+ + Q+
Sbjct: 137 GTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPE------QRQIA 190
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLK 585
+ SAT+ +KK+A++ ++ P + +K
Sbjct: 191 LFSATMPNV-IKKIAKQFLNQPKIIKIK 217
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/101 (36%), Positives = 63/101 (62%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P A I+ P+REL Q FT+ +K+ N ++ +++ GG+ V Q ++L G ++V T
Sbjct: 530 PLAAILAPTRELVVQL---FTEARKFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVAT 586
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
PGRLED I+ G ++ + ++ +LDEAD ++ G+G IE +
Sbjct: 587 PGRLEDFIKRGKVNFQNLKYLILDEADKMIDMGFGPQIEHI 627
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 78.2 bits (184), Expect = 2e-13
Identities = 54/149 (36%), Positives = 80/149 (53%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+RELA+Q K + IR+L GG+ DQ L GVD+V+GT
Sbjct: 185 PLVLVMAPTRELAQQI---EEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGT 241
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL++ +LS ++ VLDEAD +L G+ IE L QIPK Q ++
Sbjct: 242 PGRLNDLLRKHHLS--SVQYLVLDEADRMLDMGFMPQIESLIDQIPK------ERQTLMF 293
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGED 594
SAT +VK +A K + P + + ++
Sbjct: 294 SATWPK-EVKLLASKFLKDPIKITVGSQE 321
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 78.2 bits (184), Expect = 2e-13
Identities = 42/140 (30%), Positives = 82/140 (58%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
+++PQA+I+ P+REL+ Q + + +K+ + +R ++V GG + + Q+++L+ G ++
Sbjct: 234 HSSPQALILAPTRELSLQI---YGEARKFTYHTPVRCVVVYGGADPRHQVHELSRGCKLL 290
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
V TPGRL D+ GY+ + RF +LDEAD +L G+ I + + + Q
Sbjct: 291 VATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDMGFEPQIRMIVQGPDSDMPRAGQRQT 350
Query: 499 VVCSATLHAFQVKKMAEKLM 558
++ SAT +++++A + M
Sbjct: 351 LLYSATF-PVEIQRLAREFM 369
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 78.2 bits (184), Expect = 2e-13
Identities = 49/138 (35%), Positives = 75/138 (54%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+RELA+Q T F + P IR + GG Q+ L GV+VV+ T
Sbjct: 303 PVVLVLAPTRELAQQIQTVVRDFGTH-SKPLIRYTCIFGGALKGPQVRDLERGVEVVIAT 361
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D ++ G +L C + VLDEAD +L G+ I ++ I +I D Q+++
Sbjct: 362 PGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKI---IEQIRPD---RQVLMW 415
Query: 508 SATLHAFQVKKMAEKLMH 561
SAT +V+ +AE +H
Sbjct: 416 SATWPK-EVQALAEDFLH 432
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = +1
Query: 124 DIKPVNNAPQAIIIEPSRELAEQTCTQFTKF-KKYLENPKIRELLVVGGINVKDQINQLN 300
D K P +I+ P+RELA Q + K K E +IR L +VGG N+ Q L
Sbjct: 211 DYKTSQEGPYGLILAPARELALQIEDEAQKLLNKTHELKRIRTLSIVGGRNIDQQAFSLR 270
Query: 301 CGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
GV++++ TPGR++D ++ L C + +LDEAD ++ G+ + + + QIP
Sbjct: 271 KGVEIIIATPGRMQDCLEKTLTVLVQCSYVILDEADRMIDLGFQDSLNFILDQIP 325
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 78.2 bits (184), Expect = 2e-13
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I+P + Q +++ P+RELA Q + T+ K IR + + GG + + Q+ L
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRG---IRSVAIYGGQDFRSQVKALEEL 120
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
+VVGTPGRL + ++ Y+ + R VLDEAD +L G+ + E++ +++P+
Sbjct: 121 PHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPE------ 174
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGED-AVPETXXXXXXXXDPQK 645
R Q ++ SATL V+ +A K + P ++ + E VP T + QK
Sbjct: 175 RRQTLLFSATLSP-PVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQK 227
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 78.2 bits (184), Expect = 2e-13
Identities = 42/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P A+++ P+RELA Q F + +K+ +R +V GG + +Q+ +++ G D++V T
Sbjct: 238 PSALVLAPTRELATQI---FEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVAT 294
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL++ G +SL + ++ VLDEAD +L G+ I + + + + R Q ++
Sbjct: 295 PGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENR--QTLMF 352
Query: 508 SAT 516
SAT
Sbjct: 353 SAT 355
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 77.4 bits (182), Expect(2) = 3e-13
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
+P N Q I++ PSRELA Q T+ K + + I L V GG ++ QI L+ GV
Sbjct: 67 QPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISI--LPVYGGQPIERQIKALSRGV 124
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
+++GTPGR+ D I+ L L VLDEAD +L G+ E IE + IPK
Sbjct: 125 QIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPK------E 178
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGED-AVPETXXXXXXXXDPQK 645
Q V+ SAT ++ ++ + P V + ++ VP+ +P K
Sbjct: 179 RQTVILSATFPP-EILDISRRFQKNPIDVKMVHQELTVPQIEQYYIEVREPAK 230
Score = 21.0 bits (42), Expect(2) = 3e-13
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 763 KGKYCVRAIREHKMDRAIIFCRT 831
K +R + ++ R IIFC T
Sbjct: 230 KADTLIRVLEFYQPQRTIIFCNT 252
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 77.8 bits (183), Expect = 3e-13
Identities = 48/156 (30%), Positives = 88/156 (56%)
Frame = +1
Query: 124 DIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNC 303
DIK + +++I+ P+RELA Q Y + ++ +V GG+ + Q++ +
Sbjct: 70 DIKA--KSTRSLILTPTRELASQI---MQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIEL 124
Query: 304 GVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDG 483
G+D++V TPGRL DLI+ G ++ FVLDEAD +L G+ + ++ + ++PK
Sbjct: 125 GLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPK----- 179
Query: 484 RRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
Q ++ SAT+ A +++ +AE ++ PT + + E
Sbjct: 180 -SRQTLLFSATMPA-EIEILAEAILTDPTKIQITAE 213
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 77.8 bits (183), Expect = 3e-13
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 1/185 (0%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G+ + QAP K I+ A Q +I+ P+RELA Q + K KYL
Sbjct: 39 GHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKA-QVLIVTPTRELALQVADEVAKLGKYL- 96
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
K+R L V GG ++ QI L GV+V+VGTPGR+ D I + +LDEAD
Sbjct: 97 --KVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADE 154
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKG- 588
+L G+ + IE + + +T+ R Q ++ SATL A +K + +K + V L G
Sbjct: 155 MLDMGFIDDIEAI---LNTLTN---RQQTLLFSATLPA-PIKTIIKKFLGGYKTVKLVGR 207
Query: 589 EDAVP 603
E VP
Sbjct: 208 EKTVP 212
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Frame = +1
Query: 115 ASTDIKPVNNAP-QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQIN 291
A D + +N+ P A+++ P+RELA+Q + ++Y + ++V GG+++ +QI
Sbjct: 72 AQPDTQHINSTPITALVLVPTRELAQQV---HSSIEQYAYGSSVTSVMVYGGVSIGEQIR 128
Query: 292 QLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
QL G ++V TPGRL DL++ LSL+ V DEAD +L G+ + I + +++P
Sbjct: 129 QLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEVLKRLP 186
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 77.8 bits (183), Expect = 3e-13
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ I++ P+RELA+Q + ++ P + V GG + Q ++L GVD+VVGT
Sbjct: 102 PKCIVLAPTRELAKQVENEI-----FITAPTLDTACVYGGTPIGQQESKLRRGVDIVVGT 156
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ DL+ L L+ F VLDEAD +L G+ E +E + P GR Q +
Sbjct: 157 PGRIMDLMNRRALDLSEIEFVVLDEADQMLNVGFEEDVEAILHDCPA----GR--QTFLF 210
Query: 508 SATLHAFQVKKMAEKLMHFP-TWVDLKGED 594
SAT+ + VK++ +K + VDL G++
Sbjct: 211 SATMPQW-VKQITKKFLKAQHVVVDLVGDN 239
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 77.8 bits (183), Expect = 3e-13
Identities = 45/138 (32%), Positives = 75/138 (54%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +I+ P+RELA Q ++ KF N +R +V GG + QI ++ G ++V T
Sbjct: 262 PKCLILAPTRELAIQILSESQKFSL---NTPLRSCVVYGGADTHSQIREVQMGCHLLVAT 318
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D I+ +SL C++ VLDEAD +L G+ I ++ + G Q ++
Sbjct: 319 PGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEE--SNMPSGINRQTLMF 376
Query: 508 SATLHAFQVKKMAEKLMH 561
SAT +++K+A ++
Sbjct: 377 SATFPK-EIQKLAADFLY 393
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 77.8 bits (183), Expect = 3e-13
Identities = 53/155 (34%), Positives = 81/155 (52%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
+KP N QA+I+ P+RELA QT K+ I ++ GG N++D I +LN
Sbjct: 108 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTNLRDDILRLNET 164
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
V ++VGTPGR+ DL L+ C F++DEAD +L + +IE++ +P
Sbjct: 165 VHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTH---- 220
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
Q ++ SAT VK+ K +H P ++L E
Sbjct: 221 --QSLLFSATF-PLTVKEFMVKHLHKPYEINLMEE 252
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 77.4 bits (182), Expect = 4e-13
Identities = 48/151 (31%), Positives = 84/151 (55%)
Frame = +1
Query: 154 AIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPG 333
A+++ P+REL Q + K K+ E IR + ++GG + K Q L ++V TPG
Sbjct: 73 ALVLAPTRELTMQIAEEAKKLLKHSEG--IRSVPIIGGTDYKSQNKDLEGLNGIIVATPG 130
Query: 334 RLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSA 513
RL D+I+ G + +++ FFVLDEAD +L G+ I+ + + K + R Q ++ SA
Sbjct: 131 RLIDMIKSGSIDISNVEFFVLDEADRMLDMGF---IQDIRWLLHKCKN---RKQTLLYSA 184
Query: 514 TLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
TL + +V ++A + ++ P + + E + E
Sbjct: 185 TL-SVEVMRLAYRFLNEPVEIQINPEKIITE 214
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 77.4 bits (182), Expect = 4e-13
Identities = 53/161 (32%), Positives = 87/161 (54%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I P ++ QA+I+ P+RELA Q T+ K ++ I L + GG +V Q+ +L
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKM--LVQREDINVLAIYGGQDVAQQLRKLKGN 124
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
+VV TPGRL D I+ + L++ VLDEAD +L G+ IE + + P G
Sbjct: 125 THIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETP-----GS 179
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
+ Q ++ SAT+ +KK+A++ M P + ++ E+ +T
Sbjct: 180 K-QTMLFSATIPK-DIKKLAKRYMDEPQMIQVQSEEVTVDT 218
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 77.4 bits (182), Expect = 4e-13
Identities = 51/160 (31%), Positives = 86/160 (53%)
Frame = +1
Query: 103 IAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKD 282
+AA ST ++ V +++I+ P+RELA Q + L IR V GG+ ++
Sbjct: 63 LAAKQSTKVQGV----RSLIVTPTRELAAQVAISVEIYSTQLN---IRSFAVYGGVRIEP 115
Query: 283 QINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
QI QL GVDV++ TPGRL DL + L + V DEAD +L G+ + ++R+ +
Sbjct: 116 QIAQLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLL 175
Query: 463 PKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDL 582
P + Q ++ SAT + Q+K A ++++ P +++
Sbjct: 176 PV------KRQTLLFSATF-SKQIKHFAREMLNAPKTIEV 208
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 77.4 bits (182), Expect = 4e-13
Identities = 49/149 (32%), Positives = 83/149 (55%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +++ P+RELA+Q K+ + +R VVGG+ Q+ L G +VVGT
Sbjct: 77 PECLVLCPTRELAQQVSQDAINLVKFTKG--VRVATVVGGMPYGKQMASLR-GARIVVGT 133
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL Q G L+L+ ++DEAD +L G+ E +E + + G R+Q ++
Sbjct: 134 PGRLLDLAQQGKLNLSTVTTLIVDEADRMLDLGFSEDLEAIDQLC------GNRIQTLMF 187
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGED 594
SAT A ++ +AE +M+ P +++ ++
Sbjct: 188 SATF-AKRIIGLAENIMNNPKRIEMAAQN 215
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 77.4 bits (182), Expect = 4e-13
Identities = 51/153 (33%), Positives = 79/153 (51%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQ +++ P+RELA Q FT + N + L + GG + QI L G V+VGT
Sbjct: 93 PQILVLAPTRELAIQVAEAFTTYASKFRNFHV--LPIYGGQDFSPQIRGLKRGAQVIVGT 150
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ D ++ G L L + VLDEAD +L+ G+ + +E + + P Q +
Sbjct: 151 PGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPD------TCQRALF 204
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
SAT+ Q+KK+A+ + T V ++ E E
Sbjct: 205 SATMPP-QIKKVAQTYLKNATEVRIESETRTVE 236
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 77.4 bits (182), Expect = 4e-13
Identities = 39/104 (37%), Positives = 61/104 (58%)
Frame = +1
Query: 157 IIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGR 336
+I+ P+REL Q + F+K N I+ + V GG+ QIN L G D++V TPGR
Sbjct: 205 LILLPTRELCLQVLDEIKSFEK---NLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGR 261
Query: 337 LEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
L D ++ G ++L C + V+DEAD LL G+ + + ++ Q+ K
Sbjct: 262 LLDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNK 305
>UniRef50_Q54DN9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 829
Score = 77.4 bits (182), Expect = 4e-13
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Frame = +1
Query: 130 KPVNNA-PQAIIIEPSRELAEQTCTQFTKFKKYLE--------NPKIRELLVVGGINVKD 282
KP N P +I+ PS+EL Q + + K + KIR L ++GG+N
Sbjct: 278 KPFNEIDPIGLILLPSKELVTQVSNEINQLIKNIRIEESTIEGGGKIRVLSLMGGVNEPK 337
Query: 283 QINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
Q+ L GVD+++GTPGR+ L+ LSL R V+DE D L G+ I + + +
Sbjct: 338 QVKTLKSGVDIIIGTPGRIYQLLNQEQLSLQQVRMTVIDEFDKLFNLGFFPDIRDIFQYL 397
Query: 463 PKITSDGR--RLQMVVCSATL 519
P+I S + +Q V+ SATL
Sbjct: 398 PQIRSRTKPFSMQTVLTSATL 418
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 77.4 bits (182), Expect = 4e-13
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+RELA Q + + KK+ ++R ++ GG N +Q+ +L+ G ++V T
Sbjct: 351 PLGLVLAPTRELATQI---YEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVAT 407
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL--HRQIPKITSDGRRLQMV 501
PGRL+D+I G + L + RF VLDEAD +L G+ I + +R +P G+R Q +
Sbjct: 408 PGRLDDIINRGKIGLENLRFLVLDEADRMLDMGFEPQIRHIIENRDMP---PTGQR-QTL 463
Query: 502 VCSAT 516
+ SAT
Sbjct: 464 MFSAT 468
>UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7;
n=9; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 671
Score = 77.4 bits (182), Expect = 4e-13
Identities = 50/151 (33%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = +1
Query: 145 APQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
+P +++ P+RELA+Q F + L + + GG + Q +L GVD+VVG
Sbjct: 174 SPSVLVLLPTRELAKQVAADFDAYGGSLG---LSSCCLYGGDSYPVQEGKLKRGVDIVVG 230
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGR++D I+ L ++ +F VLDEAD +L+ G+ E +E + ++ D ++Q ++
Sbjct: 231 TPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKV----EDSTKVQTLL 286
Query: 505 CSATLHAFQVKKMAEK-LMHFPTWVDLKGED 594
SATL ++ VK ++ + L +DL G D
Sbjct: 287 FSATLPSW-VKNISNRFLKRDQKTIDLVGND 316
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 77.0 bits (181), Expect = 6e-13
Identities = 39/113 (34%), Positives = 64/113 (56%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
IKP + +++ P+REL+ Q F + +++ ++ L +GG+ + Q+ L G
Sbjct: 83 IKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHI---RLSSTLAIGGVPMGRQVRSLMQG 139
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
V+V+V TPGRL DL+Q L L F VLDEAD +L G+ I ++ ++P
Sbjct: 140 VEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLP 192
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 77.0 bits (181), Expect = 6e-13
Identities = 38/101 (37%), Positives = 65/101 (64%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P A+++ P+RELA Q ++ + + + P+I V GG+++ +Q+ L G +++VGT
Sbjct: 116 PGALVLVPTRELAAQVASELSSLR-IQKIPRIHT--VYGGVSIAEQLRNLEQGGEIIVGT 172
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
GR+ D I+ G L L++ R+F+LDEAD +L G+ E IE +
Sbjct: 173 TGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESI 213
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 77.0 bits (181), Expect = 6e-13
Identities = 40/122 (32%), Positives = 64/122 (52%)
Frame = +1
Query: 100 VIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVK 279
++ A+ KP + +I+ P+REL Q C F E ++ ++VGG+ +
Sbjct: 129 LLDALMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFT---EGSHLKLQVIVGGVAIG 185
Query: 280 DQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQ 459
QI + G D++V TPGRL DL+ L L+ RF VLDEAD +L G+ + ++
Sbjct: 186 PQIKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPL 245
Query: 460 IP 465
+P
Sbjct: 246 LP 247
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 77.0 bits (181), Expect = 6e-13
Identities = 40/106 (37%), Positives = 64/106 (60%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQA+I+ P+RELA+Q T+ KF L +R + +VGG ++ DQ L G ++V+ T
Sbjct: 344 PQALILVPTRELAQQIETETNKFAGRLG---LRCVSIVGGRDMNDQAYALRDGAEIVIAT 400
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
PGRL+D I+ L L+ C + V+DEAD ++ G+ + + +P
Sbjct: 401 PGRLKDCIERHVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSLP 446
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 77.0 bits (181), Expect = 6e-13
Identities = 51/143 (35%), Positives = 79/143 (55%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
K VN P +++ P+RELA Q ++ E ++ + V GG + QI+ + GV
Sbjct: 188 KKVN--PTCLVLSPTRELAVQISDVL---REAGEPCGLKSICVYGGSSKGPQISAIRSGV 242
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
D+V+GTPGRL DLI+ L L+ F VLDEAD +L G+ E + + +++ +
Sbjct: 243 DIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFI------LSNTNKV 296
Query: 490 LQMVVCSATLHAFQVKKMAEKLM 558
QMV+ SAT V K+A++ M
Sbjct: 297 RQMVMFSAT-WPLDVHKLAQEFM 318
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 77.0 bits (181), Expect = 6e-13
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Frame = +1
Query: 103 IAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKD 282
I V +K N P +++ P+RELA Q + K+ +R + V GG N +
Sbjct: 302 IHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSY----KGLRSVCVYGGGNRDE 357
Query: 283 QINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
QI +L GVD+++ TPGRL DL +++L + + VLDEAD +L G+ QI
Sbjct: 358 QIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGF-------EPQI 410
Query: 463 PKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGED--AVPETXXXXXXXXD 636
KI D R + V ++ V ++A+ + P V + D AV +
Sbjct: 411 MKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTE 470
Query: 637 PQKDSSWQT-LRKHVQTDGV 693
+K S QT L+ TD V
Sbjct: 471 EEKWSHMQTFLQSMSSTDKV 490
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 77.0 bits (181), Expect = 6e-13
Identities = 48/138 (34%), Positives = 73/138 (52%)
Frame = +1
Query: 145 APQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
APQ +++ P+RELA Q F+ K K+ GG Q ++ G+D++VG
Sbjct: 260 APQVLVLAPTRELANQVSKDFSDITK-----KLSVACFYGGTPYGGQFERMRNGIDILVG 314
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGR++D IQ G L LT + VLDE D +L G+ + +E + K S+ Q ++
Sbjct: 315 TPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNP-QTLL 373
Query: 505 CSATLHAFQVKKMAEKLM 558
SAT + V +A+K M
Sbjct: 374 FSATCPHW-VFNVAKKYM 390
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 76.6 bits (180), Expect = 7e-13
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQT---CTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
N P +II PSRELA+QT +T ++ P+IR L +GG+ V + ++ ++ GV
Sbjct: 253 NEGPYGLIICPSRELAKQTYDIIQHYTNSLRHHHCPEIRCCLAIGGVPVSESLDVISRGV 312
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGE 435
++V TPGRL D++ + L CR+ +DEAD ++ G+ E
Sbjct: 313 HIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFEE 354
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 76.6 bits (180), Expect = 7e-13
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Frame = +1
Query: 43 PP--NGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKF 216
PP G I+QAP + K + P QA+++ P+RELA+Q Q K
Sbjct: 58 PPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKL 117
Query: 217 KKYLENPKIRELLVVGGINVKDQINQLNC-GVDVVVGTPGRLEDLIQGGYLSLTHCRFFV 393
+ N K+ +++ GG+ + Q+ L VVVGTPGR+++L + L L R V
Sbjct: 118 ATGIPNMKL--VVLTGGMPLGPQLASLEAHDPHVVVGTPGRIQELARKRALHLGGVRTLV 175
Query: 394 LDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTW 573
LDEAD +L G+ E I + + K Q ++ SAT ++ +A +++ P
Sbjct: 176 LDEADRMLDMGFEEPIREIASRCDK------HRQSLLFSATFPDI-IRTLAREILKDPIE 228
Query: 574 VDLKGEDAVPE 606
+ ++G D PE
Sbjct: 229 ITVEGADNAPE 239
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 76.6 bits (180), Expect = 7e-13
Identities = 59/169 (34%), Positives = 82/169 (48%)
Frame = +1
Query: 88 VKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGG 267
V Q V+AA D PQA+++ P+REL Q T+ +R L V GG
Sbjct: 143 VVQTVLAAKEGAD-----GRPQALVVVPTRELCVQVTADVTRAGA---RRGLRVLSVYGG 194
Query: 268 INVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIER 447
+ Q++ L GVD+VVGTPGRL DL + L L VLDEAD +L G+ +ER
Sbjct: 195 RAYEPQLSALRAGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEMLDLGFLPDVER 254
Query: 448 LHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
+ Q+P Q ++ SAT+ V +A + M P V + D
Sbjct: 255 IMSQLP------TERQTMLFSATMPG-PVISLARRFMKRPVHVRAEQPD 296
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 76.6 bits (180), Expect = 7e-13
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQL-NCGVDVVVG 324
P+A+I+ P+RELA Q KY + + + V+GG++ Q QL N VDVVV
Sbjct: 173 PRALILAPTRELAMQIAKDADGLSKYAD---LNIVTVLGGVDYDKQKEQLENEVVDVVVA 229
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGRL D +Q G + L V+DEAD +L G+ ++R+ R P+ R+ Q+
Sbjct: 230 TPGRLLDYLQQGIVYLDQVEMLVIDEADRMLDMGFIPDLKRIIRGTPE--KSIRQTQLF- 286
Query: 505 CSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
SAT + + V ++E + P V+++ E ET
Sbjct: 287 -SAT-YPYDVVALSESWTYKPEQVEIEPESVATET 319
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 76.6 bits (180), Expect = 7e-13
Identities = 48/153 (31%), Positives = 82/153 (53%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+I+ P+RELA Q + + K++ I L + GG+ + Q +L G D++V TP
Sbjct: 76 RALILTPTRELAAQVADNISAYSKHMN---ISVLTIYGGMKMATQAQKLKQGADIIVATP 132
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL + I LSL++ F VLDEAD +L G+ I+++ + + K + Q ++ S
Sbjct: 133 GRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNK------KRQNLLFS 186
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
AT + VKK+A ++ P + ++ T
Sbjct: 187 ATF-STAVKKLANDMLDKPKIISADKQNTTAAT 218
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 76.6 bits (180), Expect = 7e-13
Identities = 54/176 (30%), Positives = 84/176 (47%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G A+ +A K A A ++ PQ +I+ P REL +Q +F K K LE
Sbjct: 42 GQDALVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLE 101
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
N ++ E V GG + L+ G V+ TPGRL D+ + G L+ V+DEAD
Sbjct: 102 NFRVAE--VTGGGKLSGVKKSLH-GAQVISATPGRLIDIKEQGLLNSNCINMLVIDEADR 158
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVD 579
L G+ E + + + +PK +Q V+CSAT +K ++ L+ P ++
Sbjct: 159 LFDMGFREAVTSILKDLPK------SVQTVLCSATF-TDDIKNFSKTLLKKPVIIE 207
>UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 436
Score = 76.6 bits (180), Expect = 7e-13
Identities = 53/149 (35%), Positives = 83/149 (55%)
Frame = +1
Query: 106 AAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQ 285
A +A+ D P+ ++ P+RELAEQ + K ++ K LVVGG + Q
Sbjct: 49 AEIAAGDRLAKPKRPKVVVACPTRELAEQVA-EVAKALSHVA--KFSSYLVVGGRRLGTQ 105
Query: 286 INQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
+L+ +DVV+GTPGRL + G L L VLDEAD L +AG+G+ ++RL R +
Sbjct: 106 KERLDSAIDVVIGTPGRLIKHVDQGNLFLGSVDAMVLDEADTLFEAGFGDEVKRLLRPL- 164
Query: 466 KITSDGRRLQMVVCSATLHAFQVKKMAEK 552
K +G+ V+ SAT+ ++KK+ ++
Sbjct: 165 KARPEGK--TCVLVSATM-PDRLKKLVDE 190
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 76.6 bits (180), Expect = 7e-13
Identities = 39/101 (38%), Positives = 60/101 (59%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +I+ P+RELA Q F KK+ I+ +++ GG N+K Q++ L+ G D++V T
Sbjct: 452 PICLILAPTRELAVQI---FYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVAT 508
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
PGRL D+++ G + L F VLDEAD +L G+ I +
Sbjct: 509 PGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSI 549
>UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Rep:
DEAD-box helicase 5 - Plasmodium falciparum
Length = 755
Score = 76.6 bits (180), Expect = 7e-13
Identities = 46/148 (31%), Positives = 83/148 (56%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
N P +++EP+REL++Q F + ++ + + GG + Q N+L G+D++
Sbjct: 255 NKDPSILVLEPTRELSKQVENTFKEISQFYN---FNIMSIYGGESYTYQENKLRKGIDIL 311
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
GTPGR+ D I+ LSL + ++ VLDEAD +L G+ IER+ I + + Q+
Sbjct: 312 TGTPGRIIDHIEKKNLSLQNIKYVVLDEADEMLNLGFTHDIERILSNI-----NLKEAQV 366
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDL 582
++ SAT ++ +K ++ K + P +D+
Sbjct: 367 LLYSATTPSW-IKDISSKYLKNPFCIDV 393
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 76.6 bits (180), Expect = 7e-13
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
N+ P AII+ P+REL++Q ++ + Y + +R L V GG N+ Q+N L GV+++
Sbjct: 740 NDGPIAIILTPTRELSKQVKSEA---RPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEIL 796
Query: 319 VGTPGRLEDLIQGGYLSLTHCR---FFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
VGTPGR+ D++ +T+ F VLDEAD LL G+ QI I ++ R+
Sbjct: 797 VGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGF-------ESQIHNILNNCRK 849
Query: 490 -LQMVVCSATLHAFQVKKMAEKLMHFP 567
Q + SAT + ++ +A+KL++ P
Sbjct: 850 DKQTAMISATFPNY-IQNLAKKLLYKP 875
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 76.2 bits (179), Expect = 1e-12
Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Frame = +1
Query: 121 TDIKPVNNA-PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQL 297
+D+ N P+A+II P+REL Q F + +K+ ++ ++ ++ GG + Q+ Q+
Sbjct: 372 SDMSSANQVEPRALIISPTRELTIQI---FDEARKFSKDSVLKCHIIYGGTSTSHQMKQI 428
Query: 298 NCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITS 477
GVD++V TPGRL DL+ G ++ F VLDEAD +L G+ +E++ R +
Sbjct: 429 FQGVDILVATPGRLLDLVGKGKITFDAIEFVVLDEADRMLDMGFLPDVEKVLRH-DTMKP 487
Query: 478 DGRRLQMVVCSATLHAFQVKKMAEKLMH 561
G R Q ++ SAT +++++A K ++
Sbjct: 488 PGER-QTLMFSATFPQ-EIQQLAAKFLN 513
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 76.2 bits (179), Expect = 1e-12
Identities = 48/148 (32%), Positives = 82/148 (55%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
N PQA+++ P+RELA Q T ++ +I+ + G Q +L +VV
Sbjct: 71 NKPQALVLTPTRELAVQVKEDITNIGRF---KRIKAAAIYGKSPFARQKLELKQKTHIVV 127
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
GTPGR+ D I+ G LSL ++ V+DEAD +L G+ + +E + ++P +R+ M+
Sbjct: 128 GTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPT-----KRMTML 182
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLK 585
SATL V++++ M+ PT +++K
Sbjct: 183 F-SATLPE-DVERLSRTYMNAPTHIEIK 208
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 76.2 bits (179), Expect = 1e-12
Identities = 46/140 (32%), Positives = 74/140 (52%)
Frame = +1
Query: 49 NGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYL 228
N A+ +A + K A ++ + +PQA+++ P+RELA Q + K K +
Sbjct: 57 NNTDAVVRADTGSGKTTAFALTLLAKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSM 116
Query: 229 ENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEAD 408
N KI L + GG + Q N L G V+VGTPGR+ D ++ + L+ VLDEAD
Sbjct: 117 LNIKI--LTLCGGEPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEAD 174
Query: 409 GLLKAGYGELIERLHRQIPK 468
+L+ G+ + + + + IPK
Sbjct: 175 RMLEMGFQDSLNAIVKHIPK 194
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 76.2 bits (179), Expect = 1e-12
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 1/153 (0%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+++ P+RELA Q + + + + +I+ L + GG +++ Q+ L +++VGTP
Sbjct: 73 QALVLCPTRELAVQVTEEISSLSRRM---RIQVLAIYGGQSIELQLRSLRRNPEIIVGTP 129
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL D + G +SL+ ++ VLDEAD +L G+ I+++ Q P R Q + S
Sbjct: 130 GRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCP------RERQTFLFS 183
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKG-EDAVPE 606
ATL +V+++ K M P + ++ E VPE
Sbjct: 184 ATL-PDEVRELGTKFMKQPEIILIESPERTVPE 215
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 76.2 bits (179), Expect = 1e-12
Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+RELA+Q +F K + + V GG QI ++ GVD+VVG
Sbjct: 141 PLVLVLLPTRELAQQVSNEFELMKG---KDRYKVCSVYGGSPEYPQIQEIKKGVDIVVGC 197
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDG------RR 489
PGR+ D I+ G L+++ LDEAD +L+ G+ E ++++ + K T DG +
Sbjct: 198 PGRVLDFIERGILNVSKISVLTLDEADKMLEMGFKETVDKIIDCVRKETGDGETHSRQNK 257
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPT 570
Q+++ SAT+ + VK + ++M T
Sbjct: 258 FQVLLFSATVPPW-VKNILTEIMSSDT 283
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 76.2 bits (179), Expect = 1e-12
Identities = 46/137 (33%), Positives = 71/137 (51%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+REL Q + K L+ +R + V+GG++ + QIN + G ++ T
Sbjct: 178 PLLLVLAPTRELVNQITSVA---KTLLKLTHLRSVSVIGGVDARSQINDASRGCHALIAT 234
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL+DL G SL +C V+DEAD +L G+ I + +P ++ R M
Sbjct: 235 PGRLKDLTDRGIFSLKYCNKLVIDEADRMLDMGFEPQIREIINNLPSVSK--RHTSMF-- 290
Query: 508 SATLHAFQVKKMAEKLM 558
SAT V +A KLM
Sbjct: 291 SATFPK-SVMSLASKLM 306
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 76.2 bits (179), Expect = 1e-12
Identities = 37/104 (35%), Positives = 62/104 (59%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P ++++ P+RELA Q + + +K+ ++R +V GG ++ QI L G ++V T
Sbjct: 267 PISLVLAPTRELAVQI---YEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVAT 323
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQ 459
PGRL D+++ G + L C++ VLDEAD +L G+ I R+ Q
Sbjct: 324 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ 367
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 76.2 bits (179), Expect = 1e-12
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Frame = +1
Query: 43 PPNGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKK 222
PP IA SQ+ K + T + P + +PQAI + PSRELA QT + K
Sbjct: 130 PPRNMIAQSQSGTG--KTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGK 187
Query: 223 YLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDE 402
+ + +L+V QIN V+VGTPG + DL++ + L + FVLDE
Sbjct: 188 FTKITS--QLIVPDSFEKNKQIN-----AQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDE 240
Query: 403 ADGLL-KAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLM 558
AD +L + G G+ R+ R +PK T Q+V+ SAT A V++ A+K++
Sbjct: 241 ADNMLDQQGLGDQCIRVKRFLPKDT------QLVLFSATF-ADAVRQYAKKIV 286
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/105 (36%), Positives = 63/105 (60%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+++II P+RELA QT F + K L N ++ L++GG + DQ + L+ G D++V TP
Sbjct: 84 RSLIICPTRELALQTIKVFNELGK-LTN--LKASLIIGGSKLSDQFDNLSSGPDIIVATP 140
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
GRL +++G +SL DEAD + ++G+ E + + R +P
Sbjct: 141 GRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLP 185
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/120 (33%), Positives = 61/120 (50%)
Frame = +1
Query: 103 IAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKD 282
I + T + P+ +I+ P+REL Q + KF K I+ + GG+
Sbjct: 212 IIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKFTK---GTAIKTVRCFGGVPQSS 268
Query: 283 QINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
Q+ G D+ V TPGRL D I+ G SL+ C F +LDEAD +L+ G+ ++ + QI
Sbjct: 269 QMKDFQSGCDICVATPGRLIDFIKRGVTSLSRCTFLILDEADRMLEMGFEVQVQDIIGQI 328
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 75.8 bits (178), Expect = 1e-12
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYL- 228
G I Q+ + K + I P Q +I P+RELA+Q + K K+
Sbjct: 41 GVSVIGQSQTGSGKTHAYLLPTLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCA 100
Query: 229 ENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEAD 408
E+ I ++GG + + I +L +VVGTPGR++DL++ L + ++DEAD
Sbjct: 101 EDQMITARCLIGGTDKQRSIEKLKKQPHIVVGTPGRIKDLVEEQALFVHKANTIIVDEAD 160
Query: 409 GLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDL 582
+L G+ ++++ ++PK LQM+V SAT+ ++K +K M P + +
Sbjct: 161 LMLDMGFIHDVDKIAARMPK------NLQMLVFSATIPQ-KLKPFLKKYMENPEHIHI 211
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 75.8 bits (178), Expect = 1e-12
Identities = 52/167 (31%), Positives = 83/167 (49%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G+ I QA K I+P Q++I+ P+REL Q + K ++ +
Sbjct: 40 GHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQ 99
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
+IR +V GG + Q L +++ TPGR D ++ G + L+ + LDEAD
Sbjct: 100 --EIRIAVVYGGESYTKQFRALEAKPHLIIATPGRAIDHLERGKIDLSALKILTLDEADE 157
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEK 552
+LK G+ E +E + ++IP+ Q V+ SATL F +KK+A K
Sbjct: 158 MLKMGFQEALETILKKIPE------ERQTVLFSATLPPF-IKKIASK 197
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 75.8 bits (178), Expect = 1e-12
Identities = 53/157 (33%), Positives = 80/157 (50%)
Frame = +1
Query: 49 NGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYL 228
+G I+++P K A IKP PQA+I+ PSREL Q F + +
Sbjct: 40 DGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQI---FQVIQDWK 96
Query: 229 ENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEAD 408
++R ++GG NVK Q+ +L ++VGTPGR+ +LI+ L + + VLDE D
Sbjct: 97 AGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDETD 156
Query: 409 GLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATL 519
L+ + E + +QI K T R Q++ SATL
Sbjct: 157 QLVLPEHRETM----KQIIKTTLRDR--QLLCFSATL 187
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 75.8 bits (178), Expect = 1e-12
Identities = 53/148 (35%), Positives = 78/148 (52%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
Q I++ P+RELA+Q C + + +E P + L V GG + Q++ L GV VVGTP
Sbjct: 230 QLIVLLPTRELAKQVCNELVRLA--IETP-VDVLPVYGGTAMNPQLDALARGVHAVVGTP 286
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR+ D I+ L L+ R VLDE D +L G+ E I + R PK Q + S
Sbjct: 287 GRVLDHIRRKSLDLSKVRTVVLDECDEMLSMGFLEDIRAILRACPK------ERQTCLFS 340
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGED 594
AT+ + ++A + M P + L G+D
Sbjct: 341 ATVPR-DIARIARRDMREPEHIVLSGDD 367
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 75.8 bits (178), Expect = 1e-12
Identities = 45/148 (30%), Positives = 83/148 (56%)
Frame = +1
Query: 124 DIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNC 303
+I + Q +II P+REL Q + + K+++ +R + V GG N+++Q +++
Sbjct: 63 NIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKG--VRVVAVYGGSNIQEQAREISR 120
Query: 304 GVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDG 483
G +VV TPGR++D+++ + +T + VLDEAD +L G+ E I + P+
Sbjct: 121 GAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITNILADTPE----- 175
Query: 484 RRLQMVVCSATLHAFQVKKMAEKLMHFP 567
+L + SAT+ +V ++A++ MH P
Sbjct: 176 DKLTWLF-SATMPR-EVARIAKEFMHDP 201
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 75.8 bits (178), Expect = 1e-12
Identities = 53/147 (36%), Positives = 78/147 (53%)
Frame = +1
Query: 136 VNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDV 315
V APQA++I P+RELA Q + N +I + GG + Q++ L GV++
Sbjct: 112 VPGAPQALVIVPTRELAVQVAKDLENAARK-RNARIAT--IYGGRAYEPQVDSLQKGVEI 168
Query: 316 VVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQ 495
VVGTPGRL DL + +LSL + + +LDEAD +L G+ +E L P + Q
Sbjct: 169 VVGTPGRLIDLYKQKHLSLKNVKIVILDEADEMLDLGFLPDVETLIAGTPAVR------Q 222
Query: 496 MVVCSATLHAFQVKKMAEKLMHFPTWV 576
++ SAT+ V MA + M PT +
Sbjct: 223 TLLFSATMPG-PVIAMARRYMTQPTHI 248
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 75.8 bits (178), Expect = 1e-12
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Frame = +1
Query: 58 IAISQAPKENVKQNVIAAVASTDIKPV---NNAPQAIIIEPSRELAEQTCTQFTKFKKYL 228
+ ++Q V+ AV + +P + P A+++ P+RELA+Q +F
Sbjct: 198 VGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGS-- 255
Query: 229 ENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEAD 408
N +R + GG Q L GV++V+ TPGRL D ++ G SL C + VLDEAD
Sbjct: 256 -NTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEAD 314
Query: 409 GLLKAGYGELIERLHRQI 462
+L G+ I ++ +QI
Sbjct: 315 RMLDMGFEPQIRKIMQQI 332
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 75.8 bits (178), Expect = 1e-12
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +I+ P+RELA Q + +K+ K++ + GG V+ Q+ + G V+V T
Sbjct: 250 PYIVIVAPTRELAIQI---HDEGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVAT 306
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL--HRQIPKITSDGRRLQMV 501
PGRL D I GY++ + F VLDEAD +L G+ IE++ H +P + ++ Q +
Sbjct: 307 PGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMP----EKQQRQTL 362
Query: 502 VCSATLHAFQVKKMAEKLMH 561
+ SAT A +++++A K +H
Sbjct: 363 MFSATFPA-EIQELAGKFLH 381
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 75.8 bits (178), Expect = 1e-12
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P A+++ P+REL +Q +F K Y P R + V GG N QI++L+ G ++ T
Sbjct: 191 PSALVLVPTRELVQQILLEFNKML-YRCFP--RAVGVYGGQNRSRQIHELSKGCHFMIAT 247
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQ----IPKITSDGRRLQ 495
PGRL D + G L + HC VLDEAD +L G+ I ++ +P+ + DG Q
Sbjct: 248 PGRLIDFLDEGMLRMDHCHSVVLDEADRMLDMGFEHQIRKILSNPDYGMPQPSGDGLPRQ 307
Query: 496 MVVCSAT 516
V+ SAT
Sbjct: 308 TVLFSAT 314
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 75.8 bits (178), Expect = 1e-12
Identities = 49/153 (32%), Positives = 81/153 (52%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I P + Q +I P+RELA Q + K + E +IR +GG + + I++L
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ 125
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
+VVGTPGR+ DLI+ LS+ V+DEAD +L G+ ++ + ++P+
Sbjct: 126 PHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPE------ 179
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLK 585
LQM+V SAT+ ++K +K M P + ++
Sbjct: 180 DLQMLVFSATIPE-KLKPFLKKYMENPKYAHVE 211
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/107 (37%), Positives = 60/107 (56%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P +I+ P+RELA Q + KF Y + R + GG QI L GV++V+
Sbjct: 323 DGPIVLILAPTRELAVQIQQESGKFGSY---SRTRSTCIYGGAPKGPQIRDLRRGVEIVI 379
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
TPGRL D+++GG+ +L + VLDEAD +L G+ I ++ QI
Sbjct: 380 ATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQI 426
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 75.8 bits (178), Expect = 1e-12
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 3/160 (1%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
KP P +++ P+RELA Q + KF ++ ++ GG N+++QI++L GV
Sbjct: 457 KP-GEGPIGLVLSPTRELALQIEKEILKFSSTMD---LKVCCCYGGSNIENQISELKRGV 512
Query: 310 DVVVGTPGRLEDLI--QGGYL-SLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSD 480
+V+V TPGRL DL+ GG + +L F VLDEAD + G+ I+++ QI
Sbjct: 513 NVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRP---- 568
Query: 481 GRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAV 600
Q V+ SAT +++++A+K++H P + + G V
Sbjct: 569 --DKQTVLFSATFPR-KLEQLAKKVLHNPIEIIVGGVSVV 605
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 75.8 bits (178), Expect = 1e-12
Identities = 52/152 (34%), Positives = 80/152 (52%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+I+ P+RELA Q Y+ ++ +GG NV + I +L+ G VV GTP
Sbjct: 108 QALILAPTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR+ D+I+ L + VLDEAD +L G+ E I ++R +P T Q+V+ S
Sbjct: 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 218
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
ATL ++ +M K M P + +K ++ E
Sbjct: 219 ATL-PHEILEMTNKFMTDPIRILVKRDELTLE 249
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 75.4 bits (177), Expect = 2e-12
Identities = 44/112 (39%), Positives = 63/112 (56%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I+P QA+I+ P+RELA Q Q F +EN I L +GG +++DQI +L
Sbjct: 63 IEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPL--IGGADMRDQIKRLKDS 120
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
+VVGTPGR+ D + L L R +LDEAD +LK G+ I+ L ++
Sbjct: 121 -QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERV 171
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 75.4 bits (177), Expect = 2e-12
Identities = 51/140 (36%), Positives = 73/140 (52%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQ +++ P+RELA Q F K ++ ++ L GG + Q QL G VVVGT
Sbjct: 84 PQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLY--GGQSYGPQFQQLERGAQVVVGT 141
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D ++ L L R VLDEAD +L G+ E I+ + IPK QM +
Sbjct: 142 PGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTA------QMCLF 195
Query: 508 SATLHAFQVKKMAEKLMHFP 567
SAT+ ++K+A + + P
Sbjct: 196 SATMPP-AIRKIANRFLKDP 214
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 75.4 bits (177), Expect = 2e-12
Identities = 46/154 (29%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYL-ENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
+ +++ P+REL +Q F F ++ + PK+ + V+GG + +Q+ + G D++V T
Sbjct: 75 KVLVLTPTRELTQQIVEAFNTFGAFMSKKPKV--VGVIGGEGIGEQLFNIQKGCDILVAT 132
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
GR D++ + L+H FFVLDEAD +L G+ E +E + + + G++ Q ++
Sbjct: 133 SGRFLDILSKKQMILSHVDFFVLDEADKMLDFGFAEELELI------LEALGQKRQNLLF 186
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
SAT + ++ +A K+M P V ++ E+ E+
Sbjct: 187 SAT-YPPKMLFIASKIMQNPIEVSVEDEEPTVES 219
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 75.4 bits (177), Expect = 2e-12
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTK-FKKYLENPKIRELLVVGGINVKDQINQLNC 303
+ P +A Q ++I P+REL C Q+ + +K + V GG + QI ++
Sbjct: 63 VDPSLDAIQGLVIVPTREL----CMQYVEEIRKIAAKTDVIPYAVYGGFDRAAQIARVKQ 118
Query: 304 GVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDG 483
V ++V TPGRL DL+ G LS + +LDEAD LLK G+ E IE + ++
Sbjct: 119 TVHILVATPGRLIDLLYEGILSFARIKCVILDEADELLKVGFLEDIEFI------LSCIR 172
Query: 484 RRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQK 645
+ Q ++ SAT+ +KK+ + +H P ++ L + + PE+ +P++
Sbjct: 173 HKHQTLLFSATM-PDDIKKLTQDCLHEPQYISLVTKRSAPESIEHYFSYVNPKQ 225
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 75.4 bits (177), Expect = 2e-12
Identities = 49/151 (32%), Positives = 80/151 (52%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
KP +A+I+ P+RELA Q E I +V GG++V+ QI L GV
Sbjct: 72 KPTTRTTKALILSPTRELAVQIAESIADLS---EGTPISHCVVFGGVSVRPQIQALARGV 128
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
D++V TPGRL DL++ + L R +LDEAD +L G+ + ++ + P D R
Sbjct: 129 DILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCP----DDR- 183
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPTWVDL 582
Q ++ SAT+ ++ +++K++ P V +
Sbjct: 184 -QSMMFSATMPK-PIEDLSKKILTNPQKVSV 212
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 75.4 bits (177), Expect = 2e-12
Identities = 46/149 (30%), Positives = 81/149 (54%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P A+++ P+RELA Q +FT K+ + + + V GG ++ +Q+ +L G +++VGT
Sbjct: 89 PSALVMCPTRELAIQVAQEFTALAKHRD---LSVVAVYGGASMGEQLQKLEAGAEIIVGT 145
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ D I+ L L LDEAD +L G+ E + R+ +PK Q ++
Sbjct: 146 PGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPK------DCQQLLF 199
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGED 594
SAT+ A ++++ + P + L G++
Sbjct: 200 SATVPA-DIEQIIRDYLTDPETILLSGDE 227
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 75.4 bits (177), Expect = 2e-12
Identities = 42/137 (30%), Positives = 75/137 (54%)
Frame = +1
Query: 58 IAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENP 237
+ ++Q + +A+ D+K +PQA+++ P+RELA+Q F + + +
Sbjct: 50 VGLAQTGTGKTAAFALPILANIDVKV--RSPQALVLCPTRELAQQVAEAFRSYGRGMGG- 106
Query: 238 KIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLL 417
+R L + GG +++ Q+ L G +VV TPGRL D I+ + LT VLDEAD +L
Sbjct: 107 -LRILSIFGGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEML 165
Query: 418 KAGYGELIERLHRQIPK 468
+ G+ + ++ + + PK
Sbjct: 166 RMGFIDDVDTILAKTPK 182
>UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 620
Score = 75.4 bits (177), Expect = 2e-12
Identities = 45/149 (30%), Positives = 85/149 (57%)
Frame = +1
Query: 157 IIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGR 336
+I+ P+REL Q Q +F + N +R L++GG+ V Q+++L GV V+V TPGR
Sbjct: 278 LILAPTRELCMQIEKQTKEFVHGMTN--MRTALLIGGVPVPPQLHRLKMGVQVIVATPGR 335
Query: 337 LEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSAT 516
+ ++I + LTH V+DE D +L+ G+ + ++++ ++ R Q ++ SAT
Sbjct: 336 MVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERL------SNRRQTMLFSAT 389
Query: 517 LHAFQVKKMAEKLMHFPTWVDLKGEDAVP 603
+ ++ MA +L++ P ++ G ++P
Sbjct: 390 IPP-SIEAMASRLLNAPVFIS-AGSPSLP 416
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/143 (30%), Positives = 79/143 (55%)
Frame = +1
Query: 157 IIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGR 336
+++ P+RELAEQ Q +F+ + ++V GGIN Q++ L D++V TPGR
Sbjct: 79 LVLAPTRELAEQIHEQAKQFEA---KTGLTSVVVTGGINYGSQLSVLEKTHDILVATPGR 135
Query: 337 LEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSAT 516
L DL++ +L + ++DEAD +L G+ ++ + Q R Q ++ SAT
Sbjct: 136 LMDLLEAEQYNLEGIEWLIIDEADRMLDMGFAATVKEMALQA------RHRQQSLLLSAT 189
Query: 517 LHAFQVKKMAEKLMHFPTWVDLK 585
L++ V K + +L+ P ++D++
Sbjct: 190 LNSSGVIKFSRELLTEPEYIDVQ 212
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/107 (34%), Positives = 64/107 (59%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQ +++ P+RELA+Q F ++ + ++ ++ L + GG ++Q++ L G V+VGT
Sbjct: 78 PQVLVLAPTRELAQQVAASFVQYGRGVKGLEV--LSLCGGQEYREQLSGLRRGAQVIVGT 135
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
PGR+ D + G L L VLDEAD +L+ G+ + ++R+ PK
Sbjct: 136 PGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRVVSDTPK 182
>UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein;
n=14; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 451
Score = 74.9 bits (176), Expect = 2e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Frame = +1
Query: 58 IAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENP 237
+ + QA + ++Q V A A + +NA QA+++ P+RELA+Q T L +
Sbjct: 72 LPLLQAIHQQLQQQVGLAGAESVPSLASNA-QALVLVPTRELAQQVTTALHALASKLSS- 129
Query: 238 KIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLL 417
++ L+ GGI ++Q+ +L +VV TPGRL DL ++SL ++ VLDEAD LL
Sbjct: 130 SLKIQLLCGGIAQEEQLAELAAKPQLVVATPGRLLDLCTQSHISLDSIKYLVLDEADRLL 189
Query: 418 KAGYGELIERLHRQIPKITSDGRRLQMVVCSATL 519
+ G+ +++L + K R Q ++ SATL
Sbjct: 190 EMGFWPDVQKLMAMMLK------RKQTLLFSATL 217
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 74.9 bits (176), Expect = 2e-12
Identities = 55/184 (29%), Positives = 93/184 (50%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G I QA + K A I+ + + QAI++ P+RELAEQ Q K +
Sbjct: 41 GKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIG 100
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
N K+ L GG + QI L ++VGTPGR+ D ++ + L + + VLDEAD
Sbjct: 101 NIKVTTLC--GGQPMGPQIQSLKHSPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADR 158
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
+L G+ + + + Q PK ++Q ++ SAT Q++++A++ +H P ++ +
Sbjct: 159 MLDMGFEDDLRIIFGQTPK------QVQTLLFSATF-TEQIERVAKQYLHNPVTCKVESQ 211
Query: 592 DAVP 603
+ P
Sbjct: 212 ENKP 215
>UniRef50_A7AN17 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 693
Score = 74.9 bits (176), Expect = 2e-12
Identities = 64/225 (28%), Positives = 99/225 (44%)
Frame = +1
Query: 157 IIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGR 336
+++EP+ E++ QT F + KYL +P + V G G VVV T
Sbjct: 279 LVLEPTIEMSNQTLEYFQLYAKYLTSPSV----TVSGSQ----------GSHVVVTT--- 321
Query: 337 LEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSAT 516
L L R FV+DEAD LLK ++ + + T+ RLQ+++ SAT
Sbjct: 322 ---LRGASKFRLNTIRHFVMDEADELLKQDASSVLSLVKSMRAQRTNSSARLQVLLFSAT 378
Query: 517 LHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTLRKHVQTDGVH 696
LH V +L + W+DLKG + +T DP K +++ + +TDG+
Sbjct: 379 LHNPVVTDNVGELTNHAQWIDLKGIPQIADTVDVCVVNIDPGKTYAFEDRYPNPKTDGLE 438
Query: 697 AKDNIRSGNTTPETLSEAVXILKGKYCVRAIREHKMDRAIIFCRT 831
D S + LK K V + +H ++ +IFCRT
Sbjct: 439 HID----------CNSMRIKTLKPKCLVSLLDKHNINSGLIFCRT 473
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 74.9 bits (176), Expect = 2e-12
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+A+I+ P+RELA+Q + I LV+GG++ ++Q L D+++GT
Sbjct: 78 PKALIMSPTRELAQQLKAVCDMLAAHCA---ITSTLVIGGVSDEEQRELLTPAPDIIIGT 134
Query: 328 PGR-LEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
PGR ++ + L L H +FFVLDEAD LL G+ + + Q+P+ + Q ++
Sbjct: 135 PGRFIDSIFNAKVLKLEHLQFFVLDEADRLLGKGFESQLNTIVSQLPE------KHQTLL 188
Query: 505 CSATLHAFQVKKMAEKL 555
+ATL+ QV K+A K+
Sbjct: 189 FTATLND-QVAKLATKI 204
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 74.9 bits (176), Expect = 2e-12
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +I+ P+RELA Q + KF K ++ IR + GG +K QIN L GV++VV T
Sbjct: 352 PLGLILAPTRELALQINEEVEKFTK--QDRSIRTICCTGGSEMKKQINDLKRGVEIVVAT 409
Query: 328 PGRLEDLI---QGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
PGRL D++ G +S F V+DEAD L G+ I QI K + Q
Sbjct: 410 PGRLIDILTLNSGKLISTKRITFVVMDEADRLFDMGFEPQI----TQIMKTVRPDK--QC 463
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKD 648
V+ SAT +++ A +++ P V + + V E D + D
Sbjct: 464 VLFSATF-PNKLRSFAARILTDPLTVTINSNNLVNENVNQSFYIEDNEND 512
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 74.9 bits (176), Expect = 2e-12
Identities = 48/149 (32%), Positives = 80/149 (53%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+RELA Q + KF K + KI + GG Q+ ++ GVD+VV T
Sbjct: 234 PTILVLSPTRELATQIQVEALKFGK---SSKISCACLYGGAPKGPQLKEIERGVDIVVAT 290
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D+++ +SL + VLDEAD +L G+ I ++ ++P + Q ++
Sbjct: 291 PGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVP------TKRQTLMY 344
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGED 594
+AT +V+K+A L+ P V++ D
Sbjct: 345 TATWPK-EVRKIAADLLVNPAQVNIGNVD 372
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 74.5 bits (175), Expect = 3e-12
Identities = 46/156 (29%), Positives = 82/156 (52%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
N P +I+ P+REL +Q T+ ++ K + N + LL GG N +Q L GV+++
Sbjct: 133 NEGPIGLILAPTRELCQQVYTESKRYAK-IYNISVGALL--GGENKHEQWKMLKAGVEIL 189
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
+ TPGRL ++IQ +L C + V+DEAD + G+ + I + +QI Q
Sbjct: 190 IATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIRSIMQQIRP------DRQT 243
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
++ +ATL +++ + ++ P + + GE+ E
Sbjct: 244 LLFTATLKK-KIQNLVMDVLRNPVTIKIGGENQANE 278
>UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=48; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 452
Score = 74.5 bits (175), Expect = 3e-12
Identities = 48/140 (34%), Positives = 71/140 (50%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +I+ P+RELA+Q + + + L L+ GG N DQ+ L G +V T
Sbjct: 78 PRGLILVPTRELAKQV---YGELRSMLGGLSYTATLITGGENFNDQVKALARGPRFIVAT 134
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D + L L VLDEAD +L G+ + + R+H + RR Q ++
Sbjct: 135 PGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHN-----AAKHRRRQTLMF 189
Query: 508 SATLHAFQVKKMAEKLMHFP 567
SATL V MA +L++ P
Sbjct: 190 SATLDHADVNDMAMELLNEP 209
>UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2;
Corynebacterium|Rep: Putative RNA helicase -
Corynebacterium diphtheriae
Length = 452
Score = 74.5 bits (175), Expect = 3e-12
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPK----IRELLVVGGINVKDQINQLNCGVDV 315
P+ +I+ P+RELA Q ++ LE P +R L VVGG+++K I L VD+
Sbjct: 75 PRGLILVPTRELAAQV-------RERLEEPASAMGLRVLEVVGGVSIKRHITSLASPVDI 127
Query: 316 VVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQ 495
+V TPGR +DLI G LSL+ LDEAD + G+ + +L PK Q
Sbjct: 128 LVATPGRAQDLINQGKLSLSEVEISTLDEADQMADMGFLPQVTKLLELTPKTA------Q 181
Query: 496 MVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
+ SATL V K+ ++ M P A ET
Sbjct: 182 RLFFSATLDG-DVNKLVDRFMSDPVTHSTTAVKATVET 218
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 74.5 bits (175), Expect = 3e-12
Identities = 40/106 (37%), Positives = 60/106 (56%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+ +++EP+RELA Q F K+ KY + + +V GG+ Q L GVDVV TP
Sbjct: 203 RCLVLEPTRELALQVEEAFQKYSKYTD---LTATVVYGGVGYGKQREDLQRGVDVVAATP 259
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
GRL D I+ G ++L VLDE D +L G+ ++R+ +Q P+
Sbjct: 260 GRLLDHIEQGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQ 305
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 74.5 bits (175), Expect = 3e-12
Identities = 51/147 (34%), Positives = 79/147 (53%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+II P+RELA Q + KK E I L GG +V+ Q+ +L + +++GTP
Sbjct: 73 QALIITPTRELAIQITAET---KKLAEVKGINILAAYGGQDVEQQLRKLKGSIHIIIGTP 129
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRL D ++ ++L VLDEAD +L G+ +E + IPK R Q + S
Sbjct: 130 GRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPK------RRQNMFFS 183
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGE 591
AT+ QV+ +AE+ M P + ++ +
Sbjct: 184 ATM-PNQVRTLAEQYMKDPVQIQVQSK 209
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/101 (36%), Positives = 57/101 (56%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+AI++ P+REL Q F + +K+ +R ++ GG ++ QI L G +++ T
Sbjct: 391 PRAIVVGPTRELIYQI---FLEARKFSRGTVVRPVVAYGGTSMNHQIRDLQRGCHILIAT 447
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
PGRL D I G + L H F +LDEAD +L G+ I +L
Sbjct: 448 PGRLMDFINRGLVGLDHVEFVILDEADRMLDMGFETEIRKL 488
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 74.5 bits (175), Expect = 3e-12
Identities = 49/159 (30%), Positives = 84/159 (52%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
+ + + +A+++ P+RELA QT + K+ + ++ +LV+GG ++ Q ++
Sbjct: 103 REIKSGARALVLTPTRELAIQTFKFIKQLGKFTD---LKTILVLGGDSMDSQFAAIHTLP 159
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRR 489
D++V TPGR L L L+ ++ V DEAD L + G+GE + R++P+
Sbjct: 160 DIIVATPGRFLHLCVEMDLKLSSVQYCVFDEADRLFEMGFGEQLTETLRRLPEAR----- 214
Query: 490 LQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
QMV+ SATL V A+ + PT + L E +PE
Sbjct: 215 -QMVLFSATLPKLMV-DFAKAGLSDPTLIRLDVESKIPE 251
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/113 (33%), Positives = 62/113 (54%)
Frame = +1
Query: 130 KPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGV 309
KP Q +++ P+RELAEQ T F F K+ ++ + ++GGI + Q+ QL
Sbjct: 68 KPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTH---LKVVSLIGGIPIWQQLKQLENQP 124
Query: 310 DVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
++VVGT GR+ DL++ G + H ++DE D +L G+ + L +I K
Sbjct: 125 EIVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRIEK 177
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 74.5 bits (175), Expect = 3e-12
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P+ +++ P+RELA QT + ++ ++ ++V GG +Q V++
Sbjct: 235 SVPRVLVVSPTRELAIQT---YENLNSLIQGTNLKAVVVYGGAPKSEQARAAK-NASVII 290
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
GTPGRL DLI G + + + VLDEAD +L G+ + I + P T +G R Q V
Sbjct: 291 GTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSR-QTV 349
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLKGED--AVPETXXXXXXXXDPQKDSSW--QTLR 669
SAT V+ +A + P + + ++ A DP+ LR
Sbjct: 350 FFSATWPE-SVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLR 408
Query: 670 KHVQTDG 690
KH+ + G
Sbjct: 409 KHLSSGG 415
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/146 (29%), Positives = 78/146 (53%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +I+ P+RELA Q K+ +YL +I + + GGI+ Q + +D++V T
Sbjct: 73 PRVLIVSPTRELATQITDSIKKYSRYL---RINSITITGGISYGLQNRMFSKPIDILVAT 129
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL Q ++ +LDEAD +L G+ I +++ + ++ QM++
Sbjct: 130 PGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIY------NATSKKQQMLMF 183
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLK 585
SAT ++K+A++ + P + +K
Sbjct: 184 SATFDP-PIQKIAQEFLTNPVTISIK 208
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 74.1 bits (174), Expect = 4e-12
Identities = 50/154 (32%), Positives = 79/154 (51%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQ +++ P+RELA Q F ++ K L P L V GG ++ Q+ QL G V+VGT
Sbjct: 113 PQVLVLAPTRELAIQVAEAFQRYAKNL--PGFHVLPVYGGQSMVVQLRQLARGAHVIVGT 170
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR+ D I+ L+L VLDEAD +L+ G+ + +E + + P Q +
Sbjct: 171 PGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTP------AERQTALF 224
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPET 609
SAT+ ++++A + + P V +K T
Sbjct: 225 SATM-PDAIRRVAHRYLREPREVKIKASTTTVST 257
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 74.1 bits (174), Expect = 4e-12
Identities = 42/106 (39%), Positives = 61/106 (57%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQAII+ P+ ELA Q Q KF YLE + L+ GG +++ QI L +++VGT
Sbjct: 70 PQAIILCPTHELASQIIEQVRKFATYLEG--VNATLICGGSHIQRQIYALRKS-NIIVGT 126
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
PGR+ D I L L + VLDEAD +LK G+ ++++ + P
Sbjct: 127 PGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAP 172
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 74.1 bits (174), Expect = 4e-12
Identities = 50/151 (33%), Positives = 78/151 (51%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+A+++ P+RELA Q ++ T P ++ + V GG Q L G D VV T
Sbjct: 73 PRALVLTPTRELALQVASELTAVA-----PHLKVVAVYGGTGYGKQKEALLRGADAVVAT 127
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGR D ++ G L L+ VLDEAD +L G+ E +E L P Q ++
Sbjct: 128 PGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPP------SRQTLLF 181
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDLKGEDAV 600
SATL ++ K++AE+ M P +++ ++ V
Sbjct: 182 SATLPSW-AKRLAERYMKNPVLINVIKDEPV 211
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 74.1 bits (174), Expect = 4e-12
Identities = 40/110 (36%), Positives = 63/110 (57%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
N+A QAII+ P+REL +Q F ++ I L GGI +K QI +L ++
Sbjct: 70 NDAIQAIILAPTRELGQQIAANLISFAEHTSQVSIATLC--GGIPIKPQIERLKEATHII 127
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
V TPGRL DL++ + + +F+LDEAD ++ A E ++ + ++IPK
Sbjct: 128 VATPGRLADLVKREAIDIKSISYFILDEADEMVTA-LKEGLDSIIKEIPK 176
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 74.1 bits (174), Expect = 4e-12
Identities = 51/156 (32%), Positives = 83/156 (53%)
Frame = +1
Query: 127 IKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCG 306
I P + QAI+I P+RELA Q + K ++ + + L + GG ++ QI L
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIG---QDKRAKVLPIYGGQDIGRQIRALKKN 121
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
+++VGTPGRL D I + L + V+DEAD +L G+ + IE + +P
Sbjct: 122 PNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPS------ 175
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
Q ++ SAT+ A +K++AE+ M P V +K ++
Sbjct: 176 EHQTLLFSATMPA-PIKRIAERFMTEPEHVKVKAKE 210
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 74.1 bits (174), Expect = 4e-12
Identities = 55/177 (31%), Positives = 87/177 (49%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+I+ P+RELA QT ++ P ++ ++ GG ++D I +L V ++VGTP
Sbjct: 106 QALILVPTRELALQTSQVCKTLGAHI--PNLQVMITTGGTTLRDDILRLQQPVHILVGTP 163
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR+ DL G SL C FV+DEAD LL + +IE+ P + Q+++ S
Sbjct: 164 GRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALCP------QERQVMLFS 217
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTLRKHVQ 681
AT + VK+ ++ M P ++L E + + QK TL +Q
Sbjct: 218 ATF-PWTVKEFKDQHMVQPYEINLMDELTLKGVTQYYAYVEESQKVHCLNTLFSKLQ 273
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 73.7 bits (173), Expect = 5e-12
Identities = 46/151 (30%), Positives = 80/151 (52%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P +++ P+RELA Q + KF + + +I + + GG Q+ L G D+VV
Sbjct: 302 DGPTVLVLSPTRELATQIQDEAKKFGR---SSRISSVCLYGGAPKGPQLRDLERGADIVV 358
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
TPGRL D+++ +SL + VLDEAD +L G+ I ++ +Q+ + Q +
Sbjct: 359 ATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQP------KRQTL 412
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
+ +AT +V+K+A L+ P V++ D
Sbjct: 413 MFTATWPK-EVRKIASDLLSNPVQVNIGNTD 442
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 73.7 bits (173), Expect = 5e-12
Identities = 45/165 (27%), Positives = 82/165 (49%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+I P+RELAEQ + KY + + GG + Q L GVD++V TP
Sbjct: 76 RALIFAPTRELAEQIADNIKAYTKYTN---LSVAAIFGGRKMSSQERMLENGVDILVATP 132
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GRLE+ I+ G +S+ + F V DEAD +L G+ + ++ + Q+++ S
Sbjct: 133 GRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKIMLDVE------TNPQIMMFS 186
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQK 645
AT + Q+ ++++ ++ P + ++ E+ T D ++
Sbjct: 187 ATTSS-QLNELSKDILRKPKRIAVERENTTAHTVAHVLYPVDQER 230
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 73.7 bits (173), Expect = 5e-12
Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G I Q+ + K + +KP + Q +I PSRELA Q + + ++ +
Sbjct: 39 GKSVIGQSQTGSGKTHTFLLPLMDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQ 98
Query: 232 NPKIRELLVVGGINVKDQINQL-NCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEAD 408
P+IR VGG + + Q+N+L + VV+GTPGR+ D++ L + FV+DEAD
Sbjct: 99 -PEIRVSNFVGGTDKQRQLNKLKHQQPHVVIGTPGRILDMMNEQALKVHTAFAFVVDEAD 157
Query: 409 GLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKG 588
L G+ ++++ ++P+ +LQM+V SAT+ +++ +K + P +K
Sbjct: 158 MTLDMGFLAEVDQIAGRLPE------KLQMLVFSATIPE-KLRPFLKKYLENPVIEHIKP 210
Query: 589 EDAVPET 609
+ + ET
Sbjct: 211 KAVISET 217
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 73.7 bits (173), Expect = 5e-12
Identities = 44/145 (30%), Positives = 77/145 (53%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+ +++ P+RELA Q FK Y + + GG+ + Q+ + GVDV+V
Sbjct: 80 PRVLVLTPTRELAAQV---HDSFKVYARDLNFISACIFGGVGMNPQVQAMAKGVDVLVAC 136
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL G + L+ VLDEAD +L G+ ++++ ++P + Q ++
Sbjct: 137 PGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARLP------AKRQNLLF 190
Query: 508 SATLHAFQVKKMAEKLMHFPTWVDL 582
SAT + + +A+KL+H P +++
Sbjct: 191 SATF-SKDITDLADKLLHNPERIEV 214
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 73.7 bits (173), Expect = 5e-12
Identities = 48/164 (29%), Positives = 82/164 (50%)
Frame = +1
Query: 58 IAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENP 237
+A +Q ++ + +P +A+I+ P+RELA Q + +
Sbjct: 43 VATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQIAR---GT 99
Query: 238 KIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLL 417
IR + VGG+N + Q+ + G ++VV TPGRL D + G ++LT R +LDE+D +L
Sbjct: 100 GIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRML 159
Query: 418 KAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAE 549
G+ I+R+ +P Q ++ SATL + VK++ E
Sbjct: 160 DMGFLPTIKRIIAAMP------AERQTLLFSATLES-SVKQLVE 196
>UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;
n=3; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 39 - Oryza sativa subsp. japonica (Rice)
Length = 625
Score = 73.7 bits (173), Expect = 5e-12
Identities = 41/113 (36%), Positives = 63/113 (55%)
Frame = +1
Query: 109 AVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQI 288
A+ +KP P+A+++ P+REL EQ F K + + R +V GG ++ Q
Sbjct: 177 AMLGMSMKP--RRPRAVVLCPTRELTEQV---FRVAKSISHHARFRSTMVSGGSRIRPQE 231
Query: 289 NQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIER 447
+ LN VD+VVGTPGR+ D I+ G + ++ VLDEAD + G+G I +
Sbjct: 232 DSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRK 284
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 73.3 bits (172), Expect = 7e-12
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLEN-PKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
+A+I+ P+RELA QT KF K L K++ L++GG ++ DQ L+ D+++GT
Sbjct: 109 RALILSPTRELALQTM----KFTKELGKFTKLKTALILGGDSMDDQFAALHENPDIIIGT 164
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
PGRL +I+ L L + + V DEAD L + G+ E ++ + R+ P+
Sbjct: 165 PGRLMHVIKEMNLKLQNVEYVVFDEADRLFEMGFAEQLQEIIRRFPE 211
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 73.3 bits (172), Expect = 7e-12
Identities = 44/143 (30%), Positives = 77/143 (53%)
Frame = +1
Query: 154 AIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPG 333
A+I+ P+RELA+Q Q F ++ + G+ + Q + G D+V+ TPG
Sbjct: 75 AVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGMAMGADIVIATPG 134
Query: 334 RLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSA 513
RL + G L+H +FVLDEAD +L G+ + I ++++Q+P Q V+ SA
Sbjct: 135 RLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPS------SCQTVMFSA 188
Query: 514 TLHAFQVKKMAEKLMHFPTWVDL 582
T+ +++K+A ++ P V++
Sbjct: 189 TMPP-KIRKLAASILRDPIEVEI 210
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 73.3 bits (172), Expect = 7e-12
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Frame = +1
Query: 145 APQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
+P+ +I+ P+RELA Q + K+L ++ ++ GG+ Q+ L GVD+++
Sbjct: 77 SPRCLILTPTRELAIQIHENIEAYSKHLN---MKHAVIFGGVGQNPQVRALQGGVDILIA 133
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGRL DL +L L FVLDEAD +L G+ + I+++ +P ++ +
Sbjct: 134 TPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLP------QKRHNLF 187
Query: 505 CSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXD-PQK 645
SAT+ +++ +A +++ P V++ + E D PQK
Sbjct: 188 FSATM-PHEIQTLANRILVNPKKVEVTPVSSTAEKVEQRVMFVDKPQK 234
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 73.3 bits (172), Expect = 7e-12
Identities = 51/133 (38%), Positives = 71/133 (53%)
Frame = +1
Query: 121 TDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLN 300
TD + ++ PQA+++ P+RELA Q ++ + L R L V GG + Q+ L
Sbjct: 120 TDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLG---ARVLPVYGGAPIGRQVRALV 176
Query: 301 CGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSD 480
GVDVVV TPGR D + G L L VLDEAD +L G+ E I+ + Q P
Sbjct: 177 QGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAP----- 231
Query: 481 GRRLQMVVCSATL 519
++ Q V+ SATL
Sbjct: 232 -QKRQTVLFSATL 243
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 73.3 bits (172), Expect = 7e-12
Identities = 40/110 (36%), Positives = 61/110 (55%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
+ PQA+++ P+REL Q +R L + GG+ + QI L GV+++
Sbjct: 180 DGTPQALVVVPTRELGIQVAKDLQAAGS---TRGVRVLPIYGGVAYEPQIEALRSGVEIL 236
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
VGTPGRL DL + +L L R VLDEAD +L G+ + +ER+ +P+
Sbjct: 237 VGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLGFLDDVERILAILPE 286
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/96 (34%), Positives = 59/96 (61%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P A+++ P+REL +Q + F ++ R + +VGG +++DQ Q++ G ++++
Sbjct: 488 DGPYALVMAPTRELVQQIEKETRNFAQHFG---FRVVSLVGGQSIEDQAYQVSKGCEIII 544
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGY 429
TPGRL D ++ YL L C + VLDEAD ++ G+
Sbjct: 545 ATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGF 580
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 73.3 bits (172), Expect = 7e-12
Identities = 49/198 (24%), Positives = 103/198 (52%), Gaps = 7/198 (3%)
Frame = +1
Query: 100 VIAAVASTDIKPVN----NAPQAIIIEPSRELAEQTCTQFTKFKKYLENP--KIRELLVV 261
++ + T I+P++ P+A+I+ P+RELA+Q + K N KI + +V
Sbjct: 247 ILIKLLGTAIRPLSLKVIEGPKALILAPTRELAQQIQAEIKKILSLSSNELTKITSICIV 306
Query: 262 GGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELI 441
GG ++++ L+ G D++V TPGRL D ++ + + + VLDEAD ++ G+ + +
Sbjct: 307 GGHSIEEISYDLSKGCDILVATPGRLIDCLESHLIVIDNVNTIVLDEADKMIDFGFEDQV 366
Query: 442 ERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDL-KGEDAVPETXXX 618
+ ++ +I LQ ++ +AT+ ++++A + ++V + E+ VP
Sbjct: 367 TTILSKL-QINEMKDNLQKIMFTATMTP-TIERIANGYLRNASYVSIGNSEEFVPH--IN 422
Query: 619 XXXXXDPQKDSSWQTLRK 672
P ++S ++ L++
Sbjct: 423 QLVYYSPNENSKFRKLKQ 440
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 73.3 bits (172), Expect = 7e-12
Identities = 51/148 (34%), Positives = 82/148 (55%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
N +A+++ P+RELAEQ +F ++ + +R + GG+ + QI QL DVVV
Sbjct: 68 NGIRALVLTPTRELAEQVQNSLKEFSRHKQ---LRVAPIYGGVAINPQIRQLE-RADVVV 123
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
TPGRL D I+ G + L VLDEAD +L G+ + +E + + P SD Q +
Sbjct: 124 ATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECP---SD---RQTM 177
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLK 585
+ SAT+ + ++ ++ K M+ P+ V K
Sbjct: 178 MFSATV-SKDIQYLSSKYMNNPSKVFAK 204
>UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Shewanella oneidensis
Length = 439
Score = 73.3 bits (172), Expect = 7e-12
Identities = 51/151 (33%), Positives = 87/151 (57%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
N P+AII+ P+RELA Q K+ +++ +V GG + Q L+ GVD+++
Sbjct: 83 NQPRAIIMAPTRELAIQIAKDAILLAKHT---RLKVGIVYGGESYDVQRKVLDQGVDILI 139
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
GT GR+ D ++ G ++L + VLDEAD + G+ + I L R++P + +RL M+
Sbjct: 140 GTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRMP---NADQRLNML 196
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
SATL + +V+++A M+ P V++ E+
Sbjct: 197 F-SATL-SMKVQELAYDHMNDPVKVEIAPEE 225
>UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;
n=2; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 13 - Oryza sativa subsp. indica (Rice)
Length = 832
Score = 73.3 bits (172), Expect = 7e-12
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+I+ P+RELA+Q C + K+L +I+ + +VGG++++ Q L ++VVGTP
Sbjct: 289 RALILTPTRELAKQVCDHLKEAAKFL---RIQVVPIVGGLSMEKQERLLKRKPEIVVGTP 345
Query: 331 GRLEDLIQGG---YLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKIT-SDGRRLQM 498
GRL +L+ G + L FFVLDEAD +++ G+ ++ + +P SD + +
Sbjct: 346 GRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGT 405
Query: 499 VVCSATLHAFQVKK 540
T+ Q+KK
Sbjct: 406 TPSCETVPILQIKK 419
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 73.3 bits (172), Expect = 7e-12
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Frame = +1
Query: 40 PPPNGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFK 219
P GY I+QA K A ++ QA+++ P+RELA+Q
Sbjct: 66 PCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALG 125
Query: 220 KYLENPKIRELLVVGGINVKDQINQLNCGVD-VVVGTPGRLEDLIQGGYLSLTHCRFFVL 396
Y+ +GG NV++++ +L +VVGTPGR+ D++ YLS + FVL
Sbjct: 126 DYMGATCHA---CIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVL 182
Query: 397 DEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWV 576
DEAD +L G+ + I + +++ +Q+V+ SAT+ V ++ +K M P +
Sbjct: 183 DEADEMLSRGFKDQIYEIFQKL------NTSIQVVLLSATMPT-DVLEVTKKFMRDPIRI 235
Query: 577 DLKGEDAVPE 606
+K E+ E
Sbjct: 236 LVKKEELTLE 245
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 73.3 bits (172), Expect = 7e-12
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQL--NCGVDVVV 321
P+A+I+ P+RELA QT + + + + + GG + +Q N L N GVD++
Sbjct: 258 PRAVIVSPTRELAMQTHAALSGLASLVG---LSAVCIFGGSDKNEQRNLLYKNNGVDIIT 314
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
TPGRL+D + G +SL + F VLDEAD +L G+ E I+ + P + Q +
Sbjct: 315 ATPGRLKDFLSEGSISLANVSFAVLDEADRMLDRGFSEDIKLILSGCP----PKEQRQTL 370
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDL 582
+ +AT ++K+AE M P V +
Sbjct: 371 MFTAT-WPLDIQKLAESYMINPAQVTI 396
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 73.3 bits (172), Expect = 7e-12
Identities = 39/107 (36%), Positives = 61/107 (57%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P +++ P+RELA Q + KF + + +IR V GG+ QI L+ GV+V +
Sbjct: 206 DGPIVLVLAPTRELAVQIQEEMKKFGR---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 262
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
TPGRL D+++ G +L + VLDEAD +L G+ I ++ QI
Sbjct: 263 ATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI 309
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 72.9 bits (171), Expect = 9e-12
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
GY + QA K A ++ +A+++ P+RELA Q Q KY
Sbjct: 37 GYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKY-- 94
Query: 232 NPKIRELLVVGGINVKDQINQL-NCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEAD 408
++ + GG +VK ++ L N VD+++GTPGR++DLI L+L+ + VLDE D
Sbjct: 95 -KRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRIKDLIDRKALNLSKVEYLVLDEFD 153
Query: 409 GLLKAGYGELIERLHRQIPK 468
+L G+ E IE + +PK
Sbjct: 154 QMLDMGFIEDIEYIISFLPK 173
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 72.9 bits (171), Expect = 9e-12
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGG-INVKDQINQLNCGVDVVVGT 327
+A+I+ P+R+LA+Q C F + +R + GG IN Q L GVD++V
Sbjct: 84 RALILSPTRDLADQICVAMNHFGRQTH---LRCATIYGGKINYTRQYQLLTGGVDIIVAC 140
Query: 328 PGRLEDLIQGGYLS-LTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
PGRL DL+QG + L + VLDEAD L G+ + I + + +P R Q ++
Sbjct: 141 PGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPP------RRQNLL 194
Query: 505 CSATLHAFQVKKMAEKLMHFPTWVDL 582
SAT+ A ++ + +K++H P + +
Sbjct: 195 FSATMSA-DIRLLIDKVLHRPVRIQI 219
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 72.9 bits (171), Expect = 9e-12
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENP-KIRELLVVGGINVKDQINQLNCGVDVV 318
+ P A+++ P+RELA Q + K L P +R +GG ++ QI +L+ G ++V
Sbjct: 251 SGPYALVLAPTRELALQIQKETLK----LATPFGLRVCCCIGGEPMQPQIEELSNGAEIV 306
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
V PGRL+DL+ YL L C F VLDEAD ++ G + + ++P + DG ++
Sbjct: 307 VAAPGRLKDLLNQSYLVLGQCYFVVLDEADKMIDLGLDVQVRYIFSELPSV-KDGSTEEI 365
Query: 499 V 501
+
Sbjct: 366 I 366
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 72.9 bits (171), Expect = 9e-12
Identities = 48/140 (34%), Positives = 78/140 (55%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P+A+I+ P+RELA Q + L ++ +V GG ++ +QI L GVDV+V T
Sbjct: 133 PRAVILTPTRELAMQVADALQPYGDVLG---LKMKVVCGGTSMGNQIYALERGVDVLVAT 189
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL D+I G SL + + VLDEAD + G+ + L Q+P + G+R+ +
Sbjct: 190 PGRLRDIINRGACSLENVQIAVLDEADQMSDLGFLPEVTELLDQVP---AGGQRM---LF 243
Query: 508 SATLHAFQVKKMAEKLMHFP 567
SAT+ ++K + ++ + P
Sbjct: 244 SATMEN-EIKTLVDRYLKDP 262
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 72.9 bits (171), Expect = 9e-12
Identities = 46/153 (30%), Positives = 80/153 (52%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVV 318
+N + +++ P+RELAEQ F + K L+ +R L GG+++ Q+ +L GVDV+
Sbjct: 72 SNRARVLVLVPTRELAEQVLQSFIAYGKGLD---LRFLAAYGGVSINPQMMKLRKGVDVL 128
Query: 319 VGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
V TPGRL DL + + + VLDEAD +L G+ + + +P + Q
Sbjct: 129 VATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALP------AQRQT 182
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDA 597
++ SAT + ++ MA ++ P + + +A
Sbjct: 183 LLFSATF-SDDIRAMAATILRGPVNISVSPPNA 214
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 72.9 bits (171), Expect = 9e-12
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLEN-PKIRELLVVGGINVKDQINQLNCGVDVVVG 324
P+A+++ P+RELA Q K + LE + ++V GG++ + Q L VD+V+G
Sbjct: 200 PRALVLAPTRELA----MQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPVDLVIG 255
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVV 504
TPGR+ D +GG L L+ V+DEAD +L G+ ++R+ Q+P+ G R Q ++
Sbjct: 256 TPGRIIDYSRGGSLKLSKVEVLVIDEADRMLDMGFIPDVKRIVSQLPR---KGER-QTLL 311
Query: 505 CSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
SATL + ++A + P V+ + E V E
Sbjct: 312 FSATLED-HILRLASGWLAEPVIVESEPEKMVSE 344
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 72.9 bits (171), Expect = 9e-12
Identities = 44/143 (30%), Positives = 77/143 (53%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P +++ P+RELA Q + K+ + I+ + + GG + + QIN + GV++++ T
Sbjct: 181 PNVLVLAPTRELALQIEKEVAKY----QFRGIKAVCLYGGGDRRAQINVVRNGVEILIAT 236
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVC 507
PGRL DL+Q G + ++ + +LDEAD +L G+ QI K+ D R + V
Sbjct: 237 PGRLNDLVQEGVVDVSTITYLILDEADRMLDMGF-------EPQIRKVLLDVRPDRQTVM 289
Query: 508 SATLHAFQVKKMAEKLMHFPTWV 576
++ V+++A+ MH P V
Sbjct: 290 TSATWPDGVRRLAQSYMHDPIQV 312
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 72.9 bits (171), Expect = 9e-12
Identities = 37/101 (36%), Positives = 58/101 (57%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQ +I+ P+REL Q Q KF N ++ ++ GG +V Q +L+ G ++V T
Sbjct: 274 PQVVIVSPTRELTIQIWQQIVKFSL---NSILKTVVAYGGTSVMHQRGKLSAGCHILVAT 330
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
PGRL D ++ G + + +F VLDEAD +L G+ IE++
Sbjct: 331 PGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPSIEKM 371
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 72.9 bits (171), Expect = 9e-12
Identities = 47/137 (34%), Positives = 76/137 (55%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+I+ P+RELA Q K IR ++V GG+++ QI + G +++VGTP
Sbjct: 71 RALILLPTRELAVQVAKVSEALGK---RSGIRTVVVYGGVSINKQIELILRGANIIVGTP 127
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR DLI G L+ +FVLDEAD +L G+ E I+++ +P Q + S
Sbjct: 128 GRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPV------ERQSFLFS 181
Query: 511 ATLHAFQVKKMAEKLMH 561
AT+ + ++ ++A+ MH
Sbjct: 182 ATIPS-EIIELAKGFMH 197
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 72.9 bits (171), Expect = 9e-12
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
P AII+ P+RELA Q F + K +L+ IR GG +KDQI L G ++VV T
Sbjct: 492 PIAIIMTPTRELAVQI---FRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCT 548
Query: 328 PGRLEDLIQ---GGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQM 498
PGR+ D++ G +L C + VLDEAD + G+ + R+ I I D Q
Sbjct: 549 PGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRI---INNIRPD---RQT 602
Query: 499 VVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAV 600
V+ SAT ++ +A K++ P + + G V
Sbjct: 603 VLFSATFPR-AMEALARKVLKKPVEITVGGRSVV 635
>UniRef50_Q1E7Y4 Cluster: ATP-dependent RNA helicase MAK5; n=11;
Eurotiomycetidae|Rep: ATP-dependent RNA helicase MAK5 -
Coccidioides immitis
Length = 783
Score = 72.9 bits (171), Expect = 9e-12
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Frame = +1
Query: 109 AVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQI 288
A +++ + P A+I+ P+RELA Q T + N ++R V GG+++ Q
Sbjct: 261 APTASEERESTKEPMALILSPTRELAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQ- 319
Query: 289 NQLNCGVDVVVGTPGRLEDLI--QGGYLS-LTHCRFFVLDEADGLLKAGYGELIERLHRQ 459
+L D+++ TPGRL +++ G+LS L RF V+DEAD LL G+ + +E +
Sbjct: 320 QRLLADADIIIATPGRLWEVVGSMTGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNA 379
Query: 460 IPKI 471
I K+
Sbjct: 380 IDKV 383
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 72.9 bits (171), Expect = 9e-12
Identities = 49/148 (33%), Positives = 78/148 (52%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
N PQA+I+ P+RELA Q T ++ +I+ V G + Q +L +VV
Sbjct: 69 NKPQALILTPTRELAVQVKEDITNIGRF---KRIKATAVFGKSSFDKQKAELKQKSHIVV 125
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMV 501
GTPGR+ D I+ G L L + V+DEAD +L G+ E +E + + +P R M+
Sbjct: 126 GTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPT-----ERTTML 180
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLK 585
SATL ++K++ + M P +++K
Sbjct: 181 F-SATLPQ-DIEKLSRQYMQNPEHIEVK 206
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 72.5 bits (170), Expect = 1e-11
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Frame = +1
Query: 58 IAISQAPKENVKQNVIAAVASTDIKPVN----NAPQAIIIEPSRELAEQTCTQFTKFKKY 225
I ++Q +I D +P++ N P +++ P+RELA Q + +K+
Sbjct: 346 IGVAQTGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSY- 404
Query: 226 LENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEA 405
++ + V GG N K+QI + GVD+++ TPGRL DL ++L + VLDEA
Sbjct: 405 ---KGLKSVCVYGGGNRKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEA 461
Query: 406 DGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFP 567
D +L G+ QI KI D R + V ++ ++++A + P
Sbjct: 462 DKMLDLGF-------EGQITKILLDVRPDRQTVMTSATWPHTIRQLARSYLKEP 508
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 72.5 bits (170), Expect = 1e-11
Identities = 48/164 (29%), Positives = 84/164 (51%)
Frame = +1
Query: 100 VIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVK 279
++ +A+ +P A +A+++ P+RELA Q + K+ P + +V+GG
Sbjct: 115 ILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTR-PSVA--VVIGGAKPG 171
Query: 280 DQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQ 459
Q ++ GVD++V TPGRL D + G + L VLDEAD +L G+ I ++ +
Sbjct: 172 PQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAK 231
Query: 460 IPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
+P R+ Q V+ SAT+ ++ +A + + P V + E
Sbjct: 232 LP------RQRQAVMFSATMPK-PIRALAGEFLRDPREVAVSVE 268
>UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_151, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 635
Score = 72.5 bits (170), Expect = 1e-11
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Frame = +1
Query: 109 AVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQI 288
A++ +KP P+A+++ P+REL+EQ F K + + R +V GG ++ Q
Sbjct: 186 ALSGVLMKP--RRPRAVVLCPTRELSEQV---FRVAKSISHHARFRSTMVSGGGRLRPQE 240
Query: 289 NQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
+ LN +D+VVGTPGR+ I+ G + ++ VLDEAD + G+G I + +
Sbjct: 241 DSLNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKN 300
Query: 469 --ITSDGRRLQMVVCSATL 519
SD + Q V+ +AT+
Sbjct: 301 RASKSDDQGFQTVLVTATM 319
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 902,014,593
Number of Sequences: 1657284
Number of extensions: 19289289
Number of successful extensions: 56518
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 52853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55615
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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