Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C11
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 111 7e-25
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 2e-16
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 81 8e-16
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 8e-15
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 4e-13
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 69 5e-12
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 6e-12
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 68 8e-12
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 66 3e-11
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 66 5e-11
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 66 5e-11
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 64 1e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 50 2e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 50 2e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 50 3e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 49 4e-06
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 48 1e-05
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 47 2e-05
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 44 2e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 35 0.073
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 33 0.29
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 32 0.51
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 32 0.68
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 31 1.2
SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 30 2.7
SB_1677| Best HMM Match : WD40 (HMM E-Value=0.00074) 30 2.7
SB_30478| Best HMM Match : DUF723 (HMM E-Value=4.8) 29 4.8
SB_86| Best HMM Match : PGK (HMM E-Value=0) 29 4.8
SB_57511| Best HMM Match : EGF_CA (HMM E-Value=0) 29 4.8
SB_14879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_8382| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 111 bits (267), Expect = 7e-25
Identities = 59/125 (47%), Positives = 78/125 (62%)
Frame = +1
Query: 307 VDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGR 486
VD+V GTPG+L D I +SL +FF+LDEADGLL G +LI +++ +IPKIT+ G+
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKIPKITA-GK 194
Query: 487 RLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQTL 666
RLQ E++MHFPTWVDLKG+D+VPET DP D+SW L
Sbjct: 195 RLQ-----------------ERIMHFPTWVDLKGQDSVPETVHHVVCHVDPLVDTSWVNL 237
Query: 667 RKHVQ 681
+K V+
Sbjct: 238 KKKVK 242
Score = 79.4 bits (187), Expect = 3e-15
Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +1
Query: 646 DSSWQTLRKHVQ-TDGVHAKDNIRSGNTTPETLSEAVXILKGKYCVRAIREHKMDRAIIF 822
D WQ ++ TDG+HAKDNI+ + +PE+LSEAV ILK +Y V+AI EHKMD IIF
Sbjct: 345 DLKWQFTDDAIEKTDGIHAKDNIKPNSQSPESLSEAVKILKAEYLVKAIDEHKMDSGIIF 404
Query: 823 CRT 831
CRT
Sbjct: 405 CRT 407
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 83.8 bits (198), Expect = 2e-16
Identities = 41/101 (40%), Positives = 63/101 (62%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQA+ I P+RELA Q + + +K+ +R ++ GG++V Q+ QL G +++VGT
Sbjct: 789 PQAMCIAPTRELANQI---YLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGT 845
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERL 450
PGRL D I+ G +SL +F +LDEAD +L G+ I R+
Sbjct: 846 PGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRI 886
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 81.4 bits (192), Expect = 8e-16
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Frame = +1
Query: 145 APQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
AP+ +++ P+RELA+Q +F K LE + GG+ + Q N +N G+DV+VG
Sbjct: 147 APKVLVMAPTRELAKQVGNEFENLKSNLE-----VYCIYGGMPYEPQENAINSGLDVLVG 201
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIER-LHRQIPKITSDGRRLQMV 501
TPGR+ D ++ G L L+ + VLDE D +L G+ E +E L + D + Q +
Sbjct: 202 TPGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDRED--KPQTL 259
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLKGED 594
+ SATL + V + + VDL G D
Sbjct: 260 LFSATLPPWAVNTAKKYMKKDRKLVDLIGHD 290
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 78.2 bits (184), Expect = 8e-15
Identities = 57/189 (30%), Positives = 90/189 (47%)
Frame = +1
Query: 40 PPPNGYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFK 219
P G I+QA K + I PQA+++ P+RELA Q
Sbjct: 30 PILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALG 89
Query: 220 KYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLD 399
Y+ ++ +GG N+ + I +L+ G +V GTPGR+ D+I+ L + VLD
Sbjct: 90 DYMS---VQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRRRNLRTRSIKMLVLD 146
Query: 400 EADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVD 579
EAD +L G+ E I ++R +P T Q+V+ SATL ++ +M K M P +
Sbjct: 147 EADEMLNKGFKEQIYDVYRYLPPAT------QVVLLSATL-PHEILEMTSKFMTDPIRIL 199
Query: 580 LKGEDAVPE 606
+K ++ E
Sbjct: 200 VKRDELTLE 208
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 76.2 bits (179), Expect = 3e-14
Identities = 52/152 (34%), Positives = 83/152 (54%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
QA+++ P+RELA+Q Y+ ++ +GG NV++ +L GV VVVGTP
Sbjct: 161 QALVLAPTRELAQQIQKVVLALGDYMH---VKCHACIGGTNVREDRMKLEEGVHVVVGTP 217
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCS 510
GR+ D+I G L+ + FVLDEAD +L G+ + I + ++P TS +Q+V+ S
Sbjct: 218 GRVFDMINRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLP--TS----VQVVLLS 271
Query: 511 ATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPE 606
AT+ V ++ K M + +K E+ E
Sbjct: 272 ATMPT-DVLEVTNKFMRDVVRILVKREEVTLE 302
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 72.5 bits (170), Expect = 4e-13
Identities = 42/139 (30%), Positives = 75/139 (53%)
Frame = +1
Query: 100 VIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVK 279
V+ ++ + +P A+ + P+RELA+Q + + +K+ ++ I+ + GG++V
Sbjct: 537 VLTSLIKQGLNAPPRSPLALCVAPTRELAKQI---YIEARKFSDHTPIKVCVCYGGVSVP 593
Query: 280 DQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQ 459
Q +QL G +VGTPGRL+D + + L + +LDEAD +L G+G I +L +
Sbjct: 594 YQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEE 653
Query: 460 IPKITSDGRRLQMVVCSAT 516
+ R Q ++ SAT
Sbjct: 654 SNMTAKESR--QTLMFSAT 670
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 68.9 bits (161), Expect = 5e-12
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G I QA K V ++PV+ +++ +RELA Q ++ +F KY+
Sbjct: 84 GMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMS 143
Query: 232 NPKIRELLVVGGINVK--DQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEA 405
N KI + GGIN+K Q + NC +VVGTPGR+ L + L+L H + F+LDE
Sbjct: 144 NIKIA--VFFGGINIKKDQQTLKTNCP-HIVVGTPGRILALTREKTLNLKHAKHFILDEC 200
Query: 406 DGLLK 420
D +L+
Sbjct: 201 DKMLE 205
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 68.9 bits (161), Expect = 5e-12
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G I QA K V ++PV+ +++ +RELA Q ++ +F KY+
Sbjct: 84 GMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMS 143
Query: 232 NPKIRELLVVGGINVK--DQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEA 405
N KI + GGIN+K Q + NC +VVGTPGR+ L + L+L H + F+LDE
Sbjct: 144 NIKIA--VFFGGINIKKDQQTLKTNCP-HIVVGTPGRILALTREKTLNLKHAKHFILDEC 200
Query: 406 DGLLK 420
D +L+
Sbjct: 201 DKMLE 205
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 68.5 bits (160), Expect = 6e-12
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
Frame = +1
Query: 154 AIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPG 333
AI++ P+RELA Q + KK+ + +R + V GG + +QI +L G +++V TPG
Sbjct: 147 AIVMTPTRELAIQI---HRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPG 203
Query: 334 RLEDLI---QGGYLSLTHCRFFVLDEADGLLKAGYGELIERL-HRQIPKITSDGRRLQMV 501
R+ D++ G + C + VLDEAD + G+ I ++ + ++ +I R +
Sbjct: 204 RMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQT 263
Query: 502 VCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAV 600
V + Q++ +A K++ P + + G V
Sbjct: 264 VMFSATFPRQMEALARKILDKPIEIQVGGRSVV 296
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 68.1 bits (159), Expect = 8e-12
Identities = 53/181 (29%), Positives = 85/181 (46%)
Frame = +1
Query: 52 GYIAISQAPKENVKQNVIAAVASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLE 231
G I+QA K V + +A ++ +N Q II+ P+RE+A Q + +
Sbjct: 50 GLDLIAQAKSGTGKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYD 109
Query: 232 NPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADG 411
+ + +GGI++++ L + VGTPGR++ LI+ YL R F+LDEAD
Sbjct: 110 GLACK--VFIGGISLEEDKKALK-SCHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADK 166
Query: 412 LLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGE 591
LL + + I + +P+ QM+ SAT + +K M PT+V L
Sbjct: 167 LLDESFQQQINWIFSALPE------NKQMMAFSATYPEVLANHL-KKYMTEPTFVRLNAA 219
Query: 592 D 594
D
Sbjct: 220 D 220
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/107 (33%), Positives = 57/107 (53%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
+ P +++ P+RELA+Q K+ K+R + GG QI +L GV++ +
Sbjct: 131 DGPIVLVLCPTRELAQQVQEVAYSVGKHC---KLRSTCIYGGAPKGPQIRELERGVEICI 187
Query: 322 GTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQI 462
TPGRL D+++ +L C + VLDEAD +L G+ I + QI
Sbjct: 188 ATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQI 234
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 65.7 bits (153), Expect = 5e-11
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 7/187 (3%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQL-------N 300
N QA+++ P+RELA QT + K++ + ++ GG ++KD I +L +
Sbjct: 114 NCIQALVLVPTRELALQTSQICIELGKHMG---AQVMVTTGGTSLKDDILRLYNKDIFVH 170
Query: 301 CGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSD 480
V V+V TPGR+ DL++ ++ C+ V+DEAD LL + +++E++ + +P+
Sbjct: 171 VVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPE---- 226
Query: 481 GRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQ 660
Q+++ SAT V+ EK + P ++L E + + QK
Sbjct: 227 --NRQILLFSATF-PISVRDFKEKHLRKPYEINLMDELTLHGVTQYYAFVEEKQKVHCLN 283
Query: 661 TLRKHVQ 681
TL + +Q
Sbjct: 284 TLFQKLQ 290
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 65.7 bits (153), Expect = 5e-11
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 7/187 (3%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQL-------N 300
N QA+++ P+RELA QT + K++ + ++ GG ++KD I +L +
Sbjct: 114 NCIQALVLVPTRELALQTSQICIELGKHMG---AQVMVTTGGTSLKDDILRLYNKDIFVH 170
Query: 301 CGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSD 480
V V+V TPGR+ DL++ ++ C+ V+DEAD LL + +++E++ + +P+
Sbjct: 171 VVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPE---- 226
Query: 481 GRRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVPETXXXXXXXXDPQKDSSWQ 660
Q+++ SAT V+ EK + P ++L E + + QK
Sbjct: 227 --NRQILLFSATF-PISVRDFKEKHLRKPYEINLMDELTLHGVTQYYAFVEEKQKVHCLN 283
Query: 661 TLRKHVQ 681
TL + +Q
Sbjct: 284 TLFQKLQ 290
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 64.1 bits (149), Expect = 1e-10
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +1
Query: 154 AIIIEPSRELAEQTCTQFTKFKKYLENP-KIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
A+++ P+RELA Q QF K L P ++E ++VGG+++ Q L VV+ TP
Sbjct: 78 AVVLTPTRELAFQIADQF----KVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATP 133
Query: 331 GRLEDLIQG-GYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPK 468
GRL D I+ L+L +F VLDEAD LL +G+ ++ + +P+
Sbjct: 134 GRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPE 180
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 61.3 bits (142), Expect = 1e-09
Identities = 37/110 (33%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = +1
Query: 142 NAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVV 321
N III P+REL+ QT + + L++ +++GG+N K + +L GV++++
Sbjct: 643 NGTGVIIISPTRELSLQT---YGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLI 699
Query: 322 GTPGRLEDLIQG--GYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
TPGRL D +Q G+L + + V+DEAD +L+ G+ E + ++ R +P
Sbjct: 700 ATPGRLLDHLQNTQGFL-YKNLQCLVIDEADRILEIGFEEEMRQIIRILP 748
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 59.3 bits (137), Expect = 4e-09
Identities = 35/101 (34%), Positives = 51/101 (50%)
Frame = +1
Query: 136 VNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDV 315
V + P +I P+REL +Q T+ +F K I + V GG N +Q L G ++
Sbjct: 587 VGDGPIVLICAPTRELCQQIYTEARRFGKAYN---IHVVAVFGGGNKYEQSKALQEGAEI 643
Query: 316 VVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGEL 438
VV TPGRL D ++ +L + V DEAD + G+ L
Sbjct: 644 VVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGFALL 684
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = +1
Query: 244 RELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKA 423
R +V GG ++ Q+ +L+ ++V TPGRL D++ G + L RF VLDEAD +L
Sbjct: 955 RPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDM 1014
Query: 424 GYGELIERLHRQIPKITSDGRRLQMVVCSAT 516
G+ I R+ Q + G R Q ++ SAT
Sbjct: 1015 GFEPQIRRIVDQ-DSMPKTGIR-QTLMFSAT 1043
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/100 (29%), Positives = 57/100 (57%)
Frame = +1
Query: 304 GVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIPKITSDG 483
GV V+V TPGR+ ++I + LTH V+DE D +L+ G+ + ++++ ++
Sbjct: 255 GVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERL------S 308
Query: 484 RRLQMVVCSATLHAFQVKKMAEKLMHFPTWVDLKGEDAVP 603
R Q ++ SAT+ ++ MA +L++ P ++ G ++P
Sbjct: 309 NRRQTMLFSATIPP-SIEAMASRLLNAPVFIS-AGSPSLP 346
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYL-ENPKIRELLVVGGINVKDQINQLNCGVDVVVG 324
P+A I+ P+RELA TQ K K L + + R + ++GG K + L VD++V
Sbjct: 456 PRACIVVPARELA----TQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVA 511
Query: 325 TPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGEL-IERLH 453
TPG L Q L + V+DEAD + A + L +E LH
Sbjct: 512 TPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEILH 555
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 49.6 bits (113), Expect = 3e-06
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Frame = +1
Query: 154 AIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPG 333
A+I+ P+RELA Q Q + ++ ++VGGI++ Q L +++ TPG
Sbjct: 35 ALILTPTRELAFQISEQCEALGSGIG---VKCAVIVGGIDMMSQALMLAKKPHIIIATPG 91
Query: 334 RLEDLIQGGY-LSLTHCRFFVLDEADGLLKAGYGELIERLHR--QIPKITSDGRRLQMVV 504
RL D ++ SL ++ V+DEAD +L + E + +HR + + GR + V
Sbjct: 92 RLIDHLENTKGFSLRTLKYLVMDEADRILNMDF-EKEDYIHRVGRTARAGRSGRSVTFVT 150
Query: 505 -CSATLHAFQVKKMAEKLMHFPT 570
L+ +A+KL +PT
Sbjct: 151 QYDVELYQRIEHLIAKKLPQYPT 173
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +1
Query: 154 AIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPG 333
A++I P+RELA QT F K + L++GG ++K++ ++ ++VV TPG
Sbjct: 125 ALVISPTRELAYQT---FEVLVKIGNKHDLSAGLIIGGKDLKNEQKRI-MKTNIVVCTPG 180
Query: 334 RL-EDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQIP 465
RL + + + T + VLDEAD +L G+ + + +P
Sbjct: 181 RLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLP 225
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 47.6 bits (108), Expect = 1e-05
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 3/187 (1%)
Frame = +1
Query: 43 PPNGYIAISQAPKENVKQNVIAAVASTDI-KPVNNAPQAIIIEPSRELAEQTCTQFTKFK 219
PP IA SQ+ V+ ++ D KP PQ I + P+ ELA QT
Sbjct: 141 PPVNMIAQSQSGTGKTAAFVLTMLSRVDATKPY---PQVICLSPTYELARQTGKVAEAMG 197
Query: 220 KYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLI-QGGYLSLTHCRFFVL 396
K+ + KI V G + Q C +++GTPG L D I + FVL
Sbjct: 198 KHCPHIKI-NYAVRGNQFPRGQ----KCTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVL 252
Query: 397 DEADGLLK-AGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPTW 573
DEAD ++ G+ + R+H+ + K Q+++ SAT + V K AE ++ P
Sbjct: 253 DEADIMIALQGHQDQSIRIHKSLHK------DCQVLLFSAT-YDEDVMKFAETVVPNPII 305
Query: 574 VDLKGED 594
+ L+ E+
Sbjct: 306 IRLRREE 312
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 46.8 bits (106), Expect = 2e-05
Identities = 35/94 (37%), Positives = 48/94 (51%)
Frame = +1
Query: 238 KIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLL 417
+ + + V GG+ V Q L G DVVV TPGRL DL + YL V+DE D +L
Sbjct: 195 RYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLDLYKITYL--------VMDEPDRML 246
Query: 418 KAGYGELIERLHRQIPKITSDGRRLQMVVCSATL 519
G + E+L + + T R Q ++ SATL
Sbjct: 247 GMG---MEEQLRKIVGLATGTSRARQTLLWSATL 277
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +1
Query: 148 PQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGT 327
PQA+++ P+RELA Q Y+ ++ +GG N+ + I +L+ G +V GT
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMS---VQCHACIGGTNIGEDIRKLDYGQHIVSGT 60
Query: 328 PGRL 339
PGR+
Sbjct: 61 PGRV 64
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 AIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPG 333
A+I+ P+RELA Q K KY ++ +VGG+ Q L ++VV TPG
Sbjct: 221 ALIMAPTRELALQVKDHLVKAAKYTS---VKVAAIVGGMAAPKQQRLLKQRPEIVVATPG 277
Query: 334 RLEDLI 351
RL +LI
Sbjct: 278 RLWELI 283
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 259 VGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYL 366
+GG NV++ +L GV VVVGTPGR+ D+I G L
Sbjct: 9 IGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVL 44
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 35.1 bits (77), Expect = 0.073
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +1
Query: 133 PVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVD 312
P + +A+++ P+RELA+Q +F K +I +L + + + D
Sbjct: 201 PKKSGFRAVVVSPTRELAQQIYREFCHLAKGCAF-RI-HVLTKANASTNTFGAKSSKRFD 258
Query: 313 VVVGTPGRLEDLI--QGGYLSLTHCRFFVLDEADGLLKAG 426
++V TP RL L+ + + L + + +LDEAD L + G
Sbjct: 259 ILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEG 298
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 33.1 bits (72), Expect = 0.29
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +1
Query: 391 VLDEADGLLKAGYGELIERLHRQIPKITSDGRRLQMVVCSATLHAFQVKKMAEKLMHFPT 570
VLDEAD +L G+ I R+ ++P + Q ++ SAT + +K +AEKL+H P
Sbjct: 8 VLDEADRMLDMGFIHDIRRVLTKLP------AKRQNLLFSATF-SDDIKALAEKLLHNPL 60
Query: 571 WVDL 582
+++
Sbjct: 61 EIEV 64
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 32.7 bits (71), Expect = 0.39
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +1
Query: 151 QAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTP 330
+A+I+ P+RELA QT KF I+EL G+ + + G D VV TP
Sbjct: 353 RALILSPTRELALQT----QKF--------IKELGRFTGLK-----SSVILGGDSVVATP 395
Query: 331 GRLEDLIQGGYLSLTHCRFFVLDEAD 408
GR ++ L L+ + V DEAD
Sbjct: 396 GRFLHVVMEMELKLSSVEYVVFDEAD 421
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 32.3 bits (70), Expect = 0.51
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 157 IIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGGINVKDQINQLNCGVD---VVVGT 327
II+ P+RELA Q + ++ L K V G+++ Q L + +V+GT
Sbjct: 229 IIVVPTRELASQMLYEVSR----LLGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGT 284
Query: 328 PGRLEDLIQGGYLSLTHCRFFVLDEADGLL 417
P RL +++Q + V+DE D L
Sbjct: 285 PKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 31.9 bits (69), Expect = 0.68
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 280 DQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGLLKAGYGELIERLHRQ 459
D + N G G P ++ + + L + VLDEAD +L G+ E I ++R
Sbjct: 6 DTLISANIGTKAGTGPPLEVDGIDK---LDTRSIKMLVLDEADEMLNKGFKEQIYDVYRY 62
Query: 460 IPKITSD 480
+P T +
Sbjct: 63 LPPATQN 69
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 139 NNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGG 267
+ P A+I+ P+RELA+Q + KF + L IR + V+GG
Sbjct: 176 DQGPYALILAPTRELAQQIEEEILKFGRPL---GIRTVSVIGG 215
>SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1784
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 636 VYVHNNMVYGLRNCVFPFQIDPSRKVH*FFSHFLDLECVQGCRTHNH 496
V VH+ VYG + Q + +RK++ LD EC+ H H
Sbjct: 517 VAVHDVTVYGFQGLSIRCQSNCARKINPQIKQILDAECLGSACDHTH 563
>SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 707 LSLACTPSVCTCLRSVCQELSFCGSTFTTTWCTVS 603
+ LA ++ + S+ + LS GSTF+ WCT +
Sbjct: 973 IGLAVATTIAAIVTSLGKSLSSVGSTFSHKWCTAA 1007
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 238 KIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFFVLDEADGL 414
+ R ++ GG +D+I L G +V+V TP +++ Y SL V D+AD L
Sbjct: 292 RTRVQMIFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDADML 350
>SB_1677| Best HMM Match : WD40 (HMM E-Value=0.00074)
Length = 1087
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 112 VASTDIKPVNNAPQAIIIEPSRELAEQTCTQFTKFKKYLENPKIRELLVVGG 267
VAS D+ P A +I++P++ EQ K + L+ K+ ++ V G
Sbjct: 120 VASVDLFPNEEAHANVIVDPAKSWDEQNNEVQKKVDELLDGNKLNAIICVAG 171
>SB_30478| Best HMM Match : DUF723 (HMM E-Value=4.8)
Length = 705
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +1
Query: 112 VASTDIKPVNNAP---QAIIIEPSRELAEQTCTQFTK---FKKYLENPKIRELLVVGGIN 273
V ST+ P N P + I + + L QTC +TK K+Y + PK E + GG
Sbjct: 522 VTSTEEYPHFNPPHHRRGFIYKGIKVLPRQTCGLYTKTIRLKEYPKGPKRLEHSIYGGEL 581
Query: 274 VKDQINQLNCGV 309
+ IN G+
Sbjct: 582 FQTVINNPRYGI 593
>SB_86| Best HMM Match : PGK (HMM E-Value=0)
Length = 445
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 214 FKKYLENPKIRELLVVGGINVKDQINQLNCGVDVVVGTPGRLEDLIQGGYLSLTHCRFF- 390
F K LE+P+ L ++GG V D+I + +D ++ D+I GG ++ T +
Sbjct: 195 FAKALESPEQPFLAILGGAKVADKIQLIENLLD-------KVNDMIIGGGMAYTFTKVLN 247
Query: 391 VLDEADGLLKAGYGELIERL 450
++ D L E++++L
Sbjct: 248 NMEIGDSLFDQKGAEIVQKL 267
>SB_57511| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 879
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/70 (21%), Positives = 26/70 (37%)
Frame = -1
Query: 701 LACTPSVCTCLRSVCQELSFCGSTFTTTWCTVSGTASSPFKSTQVGKCINFSAIFLTWNA 522
L C V C C C +T + CT + + P V +C+N ++
Sbjct: 567 LNCDQDVNECATDPCDNGGTCANTDGSYTCTCTAAWTGPTCKQDVNECLNNPCVYGGTCT 626
Query: 521 CRVAEHTTIC 492
V +++ C
Sbjct: 627 NTVGDYSCAC 636
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/70 (21%), Positives = 26/70 (37%)
Frame = -1
Query: 701 LACTPSVCTCLRSVCQELSFCGSTFTTTWCTVSGTASSPFKSTQVGKCINFSAIFLTWNA 522
L C V C C C +T + CT + + P V +C+N ++
Sbjct: 681 LNCDQDVNECATDPCDNGGTCANTDGSYTCTCTAAWTGPTCKQDVNECLNNPCVYGGTCT 740
Query: 521 CRVAEHTTIC 492
V +++ C
Sbjct: 741 NTVGDYSCAC 750
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/50 (26%), Positives = 19/50 (38%)
Frame = -1
Query: 701 LACTPSVCTCLRSVCQELSFCGSTFTTTWCTVSGTASSPFKSTQVGKCIN 552
L C V C C C +T + CT + + P V +C+N
Sbjct: 795 LNCDQDVNECATDPCDNRGTCANTDGSYTCTCTAAWTGPTCKQDVNECLN 844
>SB_14879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 711 NVVLSVHTVGLHVLAQCLPRAVLLRVYVHNNMVYGL 604
N V S V L+V A P A LL +HNN YG+
Sbjct: 460 NEVNSTAAVQLNVDANIEPNATLLNNTIHNNSGYGV 495
>SB_8382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 882
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 263 PTTSSSRILGFSKYFLNFVNCVQVCSANSLDGSIIIACGALFTGLISVEATAAITFCLTF 84
P + S+ +G S Y + ++C+ +LDG+I T L + T A T L F
Sbjct: 707 PALNDSKYIGMSVYNVVTLSCIGAIVTTALDGTIHYQAPYAITSLCLIICTTA-TLLLVF 765
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,473,231
Number of Sequences: 59808
Number of extensions: 631206
Number of successful extensions: 1697
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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