Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C10
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.57 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.3  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 712 TSNTXYTYLXPYPVEKK 762
           TS   YTY  PYP +KK
Sbjct: 34  TSKLLYTYRQPYPRQKK 50


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 122 ICFLVL*FFGCM 157
           +C LVL FFGC+
Sbjct: 5   VCVLVLAFFGCV 16


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 588 TGTFFTTSTVLMCSW 544
           TG FFT   VLM  W
Sbjct: 426 TGPFFTFCNVLMEMW 440


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 248 AKEEKGTPKAVEEKKQ 295
           AKE K   K +EEK Q
Sbjct: 210 AKERKQNKKRIEEKSQ 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,618
Number of Sequences: 336
Number of extensions: 2630
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)