Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C09
(863 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 4.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 4.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 4.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 4.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.4
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 22 5.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 5.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 5.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 5.4
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 9.4
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 ARGHIIEKIPELPLGCSRQSPG 598
A GH ++K E +GC SPG
Sbjct: 782 AIGHWLQKATEHVIGCVLCSPG 803
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 ARGHIIEKIPELPLGCSRQSPG 598
A GH ++K E +GC SPG
Sbjct: 782 AIGHWLQKATEHVIGCVLCSPG 803
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 ARGHIIEKIPELPLGCSRQSPG 598
A GH ++K E +GC SPG
Sbjct: 782 AIGHWLQKATEHVIGCVLCSPG 803
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 ARGHIIEKIPELPLGCSRQSPG 598
A GH ++K E +GC SPG
Sbjct: 782 AIGHWLQKATEHVIGCVLCSPG 803
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 274 CVSKEAGHQTSAESW 318
C K+ GH+ S SW
Sbjct: 1152 CEEKKPGHKPSTSSW 1166
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 ARGHIIEKIPELPLGCSRQSPG 598
A GH ++K E +GC SPG
Sbjct: 208 AVGHWMQKATEHVIGCVLCSPG 229
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 ARGHIIEKIPELPLGCSRQSPG 598
A GH ++K E +GC SPG
Sbjct: 522 AVGHWMQKATEHVIGCVLCSPG 543
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 ARGHIIEKIPELPLGCSRQSPG 598
A GH ++K E +GC SPG
Sbjct: 755 AVGHWMQKATEHVIGCVLCSPG 776
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 207 AHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQCRIMGYR 326
A TSG G+ FY+ E + + G S N I +R
Sbjct: 1376 AQTSGGGENKPIFYLDEAFQRRVTQIGSTSSNNPSISAFR 1415
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 533 ARGHIIEKIPELPLGCSRQSPG 598
A GH ++K E +GC SPG
Sbjct: 755 AVGHWMQKATEHVIGCVLCSPG 776
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 207 AHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQCRIMGYR 326
A TSG G+ FY+ E + + G S N I +R
Sbjct: 1376 AQTSGGGENKPIFYLDEAFQRRVTQIGSTSSNNPSISAFR 1415
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 189 PVRIQGAHTSGPGQ*CSRFYVQELEAAL 272
PVRI G H G C++ E AL
Sbjct: 196 PVRIMGVHRPGFDNDCNKNTSTSKEIAL 223
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,132
Number of Sequences: 336
Number of extensions: 4261
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -