Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C09
(863 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 115 6e-26
07_01_0578 + 4295386-4296489,4297394-4297507 113 2e-25
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 32 0.68
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 31 1.2
05_07_0234 - 28566846-28567766 31 1.2
10_02_0199 + 6668902-6669293,6669825-6669882 31 1.6
03_05_0366 - 23505755-23506441 30 2.1
07_03_0600 + 19866757-19867218,19867920-19868429 29 4.8
04_04_0347 + 24564589-24565296 25 6.0
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 29 6.3
03_05_0452 + 24464134-24464442 29 6.3
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 29 6.3
07_01_0380 - 2834080-2834451,2835945-2836130 28 8.4
02_04_0457 + 23093020-23093343,23093798-23093806 28 8.4
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 115 bits (276), Expect = 6e-26
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +1
Query: 118 SVARPLLSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 294
+ ARPL+SV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 295 HQTSAESWGTGRAVARIPRVRGGGTHRSGQG 387
HQTSAESWGTGRAV+RIPRV GGGTHR+GQG
Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQG 93
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/62 (50%), Positives = 32/62 (51%)
Frame = +2
Query: 389 AFGNMCRGGRMFAPTKPWRRWHHXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 568
AFGNMCRGGRMFAPTK WRRWH ARGH IE +PE
Sbjct: 94 AFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEGVPEF 153
Query: 569 PL 574
PL
Sbjct: 154 PL 155
Score = 48.4 bits (110), Expect = 7e-06
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Frame = +3
Query: 498 PLLLLASQRSFRLEDTLLKRFPSFPWVVADKVQEINKTKQAVIFLRRLKAWSDILXGVQV 677
P L+LA R R+E P FP VV+D ++ I KT Q++ L+++ A++D
Sbjct: 137 PSLVLA--RGHRIEGV-----PEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDS 189
Query: 678 SASSCW*G*NAQPSSYPAXGPLIIFXXDQG-LTRAFRNIPGXXXXXXXXXXXXXXAXGGH 854
A G GPLI++ + + +AFRN+PG A GGH
Sbjct: 190 VAIRAGKGKMRNRRYINRKGPLIVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGH 249
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 676 SQRLRAGKGKMRNRRRIQRXDP 741
S +RAGKGKMRNRR I R P
Sbjct: 189 SVAIRAGKGKMRNRRYINRKGP 210
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 113 bits (271), Expect = 2e-25
Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
Frame = +1
Query: 127 RPLLSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 300
RPL+SV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 301 TSAESWGTGRAVARIPRVRGGGTHRSGQG 387
TSAESWGTGRAV+RIPRV GGGTHR+GQG
Sbjct: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQG 94
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/62 (50%), Positives = 33/62 (53%)
Frame = +2
Query: 389 AFGNMCRGGRMFAPTKPWRRWHHXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 568
AFGNMCRGGRMFAPTK WR+WH ARGH IE +PEL
Sbjct: 95 AFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIETVPEL 154
Query: 569 PL 574
PL
Sbjct: 155 PL 156
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = +3
Query: 549 LKRFPSFPWVVADKVQEINKTKQAVIFLRRLKAWSDILXGVQVSASSCW*G*NAQPSSYP 728
++ P P V++D + I KT QA+ L+++ A++D G
Sbjct: 148 IETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYIN 207
Query: 729 AXGPLIIFXXDQG-LTRAFRNIPGXXXXXXXXXXXXXXAXGGH 854
GPLI++ + + +AFRN+PG A GGH
Sbjct: 208 RKGPLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGH 250
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 685 LRAGKGKMRNRRRIQRXDP 741
+R GKGKMRNRR I R P
Sbjct: 193 IRPGKGKMRNRRYINRKGP 211
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 90 ASLK*RNESIGSPTFIVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 245
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 90 ASLK*RNESIGSPTFIVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 245
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>05_07_0234 - 28566846-28567766
Length = 306
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -2
Query: 592 TLSATTQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPLSEVDAMVPAPP 440
T+ T+G LG LF S +RW S+S+ +P S+ + APP
Sbjct: 102 TVPPRTRGPLGRLFLEESRGSFDRWSTSTSSS-SSSSAPASDEGGLDGAPP 151
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 307 AESWGTGRAVARIPRVRGGGTHR 375
A+SW TGRA A + R R GG R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRR 58
>03_05_0366 - 23505755-23506441
Length = 228
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 193 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 369
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 370 H 372
+
Sbjct: 168 N 168
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/56 (23%), Positives = 22/56 (39%)
Frame = -2
Query: 451 PAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 284
P PP + GG H + G P +G++ + P+ H++ PP
Sbjct: 4 PPPPTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPP 59
>04_04_0347 + 24564589-24565296
Length = 235
Score = 25.4 bits (53), Expect(2) = 6.0
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 421 HTSTTTHVTEGXPDRTYGYHHHGH 350
H V + P ++ +HHHGH
Sbjct: 78 HAPAPAPVRDDKPSPSHHHHHHGH 101
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 373 YGYHHHGHA 347
+G+HHH HA
Sbjct: 99 HGHHHHRHA 107
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 90 ASLK*RNESIGSPTFIVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 245
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 249 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 350
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 427 GEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 284
G H +T H T + Y +HHH H Q H + H PP
Sbjct: 362 GAHPATQPHYTAAVAAQEYYHHHHHHL---QHHPAAAALVHHRAVAPP 406
>07_01_0380 - 2834080-2834451,2835945-2836130
Length = 185
Score = 28.3 bits (60), Expect = 8.4
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = +1
Query: 295 HQ-TSAESWGTGRAVARIPRVRGGGTHRSGQGCLR*HVSWWTYVRPH---EALAALAPSR 462
HQ S+ G A AR V G + SG G V P +A AA AP+
Sbjct: 92 HQGESSSGGGVSTAAARHCDVAGSSSSHSGSGSGSATPPRPALVSPRAGLQAAAAAAPTM 151
Query: 463 QPPTAESGLGSSR 501
P A SGL R
Sbjct: 152 NQPPAASGLSMKR 164
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 292 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 387
G + S W G A A VRGGG RSG G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGG 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,122,053
Number of Sequences: 37544
Number of extensions: 587472
Number of successful extensions: 1955
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1947
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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