Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C07
         (860 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.30 
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)              33   0.30 
SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.30 
SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.69 
SB_36424| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   2.1  
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  

>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 98

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 7   HWPSFYNVVTGKTLAL 22


>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 97

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 7   HWPSFYNVVTGKTLAL 22


>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATLXSXXR 243
           HWPSF NVVTGKT ++    R
Sbjct: 7   HWPSFYNVVTGKTLSVTQLNR 27


>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 98

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 7   HWPSFYNVVTGKTLAL 22


>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 7   HWPSFYNVVTGKTLAL 22


>SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 109

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 62  HWPSFYNVVTGKTLAL 77


>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 177

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 85  HWPSFYNVVTGKTLAL 100


>SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 76

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 5   HWPSFYNVVTGKTLAL 20


>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 98

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 7   HWPSFYNVVTGKTLAL 22


>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
          Length = 98

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 7   HWPSFYNVVTGKTLAL 22


>SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 104

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF NVVTGKT  L
Sbjct: 57  HWPSFYNVVTGKTLAL 72


>SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 61

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 181 HWPSFNNVVTGKT 219
           HWPSF NVVTGKT
Sbjct: 5   HWPSFYNVVTGKT 17


>SB_36424| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 49

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HWPSF N VTGKT  L
Sbjct: 5   HWPSFYNDVTGKTLAL 20


>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATLXSXXR 243
           HWPSF NVVTGK   +    R
Sbjct: 7   HWPSFYNVVTGKNTGVTQLNR 27


>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATLXSXXR 243
           HWPSF NVVTGK   +    R
Sbjct: 7   HWPSFYNVVTGKNTGVTQLNR 27


>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 142

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 181 HWPSFNNVVTGKTATL 228
           HW SF NVVTGKT  L
Sbjct: 43  HWTSFYNVVTGKTLAL 58


>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 98

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +1

Query: 181 HWPSFNNVVTGK 216
           HWPSF NVVTGK
Sbjct: 7   HWPSFYNVVTGK 18


>SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 100

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +1

Query: 181 HWPSFNNVVTGK 216
           HWPSF NVVTGK
Sbjct: 7   HWPSFYNVVTGK 18


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,700,947
Number of Sequences: 59808
Number of extensions: 134545
Number of successful extensions: 176
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)